RNA–Protein interactions for RNA: ENST00000588652.5

ERCC2-211, Transcript of ERCC excision repair 2, TFIIH core complex helicase subunit, humanhuman

TSL 2

Gene ERCC2, Length 2,405 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC2-211ENST00000588652 ACVR1Q04771 509 aa17.59■□□□□ 0.41
ERCC2-211ENST00000588652 CEACAM7Q14002 265 aa17.59■□□□□ 0.41
ERCC2-211ENST00000588652 GRAMD1BQ3KR37 738 aa17.59■□□□□ 0.41
ERCC2-211ENST00000588652 HECTD2Q5U5R9 776 aa17.59■□□□□ 0.41
ERCC2-211ENST00000588652 IL31Q6EBC2 164 aa17.59■□□□□ 0.41
ERCC2-211ENST00000588652 LIN28BQ6ZN17 250 aaKnown RBP eCLIP17.59■□□□□ 0.41
ERCC2-211ENST00000588652 BLOC1S5Q8TDH9 187 aa17.59■□□□□ 0.41
ERCC2-211ENST00000588652 SGF29Q96ES7 293 aa17.59■□□□□ 0.41
ERCC2-211ENST00000588652 MAELQ96JY0 434 aaKnown RBP17.59■□□□□ 0.41
ERCC2-211ENST00000588652 TBATAQ96M53 351 aa17.59■□□□□ 0.41
ERCC2-211ENST00000588652 RETREG1Q9H6L5 497 aa17.59■□□□□ 0.41
ERCC2-211ENST00000588652 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP17.59■□□□□ 0.41
ERCC2-211ENST00000588652 NCKIPSDQ9NZQ3 722 aa17.59■□□□□ 0.41
ERCC2-211ENST00000588652 KLKB1P03952 638 aa17.58■□□□□ 0.41
ERCC2-211ENST00000588652 SERPINF2P08697 491 aa17.58■□□□□ 0.41
ERCC2-211ENST00000588652 FLOT2Q14254 428 aa17.58■□□□□ 0.41
ERCC2-211ENST00000588652 GALNT3Q14435 633 aa17.58■□□□□ 0.41
ERCC2-211ENST00000588652 TECRLQ5HYJ1 363 aa17.58■□□□□ 0.41
ERCC2-211ENST00000588652 GALNT15Q8N3T1 639 aa17.58■□□□□ 0.41
ERCC2-211ENST00000588652 TSPAN17Q96FV3 270 aa17.58■□□□□ 0.41
ERCC2-211ENST00000588652 IGSF21Q96ID5 467 aa17.58■□□□□ 0.41
ERCC2-211ENST00000588652 PRICKLE1Q96MT3 831 aaPredicted RBP17.58■□□□□ 0.41
ERCC2-211ENST00000588652 BTBD9Q96Q07 612 aa17.58■□□□□ 0.41
ERCC2-211ENST00000588652 MGME1Q9BQP7 344 aa17.58■□□□□ 0.41
ERCC2-211ENST00000588652 CLSTN3Q9BQT9 956 aa17.58■□□□□ 0.41
ERCC2-211ENST00000588652 POMKQ9H5K3 350 aa17.58■□□□□ 0.41
ERCC2-211ENST00000588652 CWH43Q9H720 699 aa17.58■□□□□ 0.41
ERCC2-211ENST00000588652 SUDS3Q9H7L9 328 aaPredicted RBP17.58■□□□□ 0.41
ERCC2-211ENST00000588652 WDR41Q9HAD4 459 aa17.58■□□□□ 0.41
ERCC2-211ENST00000588652 VWA7Q9Y334 891 aa17.58■□□□□ 0.41
ERCC2-211ENST00000588652 DTNAQ9Y4J8 743 aa17.58■□□□□ 0.41
ERCC2-211ENST00000588652 ARL5AQ9Y689 179 aa17.58■□□□□ 0.41
ERCC2-211ENST00000588652 TRPC5OSA6NMA1 111 aa17.58■□□□□ 0.4
ERCC2-211ENST00000588652 SDHDO14521 159 aa17.58■□□□□ 0.4
ERCC2-211ENST00000588652 ENO3P13929 434 aaPredicted RBP17.58■□□□□ 0.4
ERCC2-211ENST00000588652 ATP5F1P24539 256 aaPredicted RBP17.58■□□□□ 0.4
ERCC2-211ENST00000588652 ATN1P54259 1190 aaPredicted RBP17.58■□□□□ 0.4
ERCC2-211ENST00000588652 PKNOX1P55347 436 aa17.58■□□□□ 0.4
ERCC2-211ENST00000588652 GRM2Q14416 872 aa17.58■□□□□ 0.4
ERCC2-211ENST00000588652 MMEL1Q495T6 779 aa17.58■□□□□ 0.4
ERCC2-211ENST00000588652 SH2D4BQ5SQS7 431 aa17.58■□□□□ 0.4
ERCC2-211ENST00000588652 AGAP9Q5VTM2 703 aa17.58■□□□□ 0.4
ERCC2-211ENST00000588652 KIAA1841Q6NSI8 718 aa17.58■□□□□ 0.4
ERCC2-211ENST00000588652 FBXL19Q6PCT2 694 aa17.58■□□□□ 0.4
ERCC2-211ENST00000588652 RNF135Q8IUD6 432 aa17.58■□□□□ 0.4
ERCC2-211ENST00000588652 ST13P4Q8IZP2 240 aaPredicted RBP17.58■□□□□ 0.4
ERCC2-211ENST00000588652 PEX13Q92968 403 aa17.58■□□□□ 0.4
ERCC2-211ENST00000588652 UBXN10Q96LJ8 280 aa17.58■□□□□ 0.4
ERCC2-211ENST00000588652 DEFB118Q96PH6 123 aa17.58■□□□□ 0.4
ERCC2-211ENST00000588652 AFF4Q9UHB7 1163 aaKnown RBP17.58■□□□□ 0.4
ERCC2-211ENST00000588652 TBC1D30Q9Y2I9 924 aa17.58■□□□□ 0.4
ERCC2-211ENST00000588652 TRIM17Q9Y577 477 aa17.58■□□□□ 0.4
ERCC2-211ENST00000588652 NEMP2A6NFY4 417 aa17.57■□□□□ 0.4
ERCC2-211ENST00000588652 LTA4HP09960 611 aaKnown RBP17.57■□□□□ 0.4
ERCC2-211ENST00000588652 CCDC166P0CW27 439 aa17.57■□□□□ 0.4
ERCC2-211ENST00000588652 DNAJB13P59910 316 aa17.57■□□□□ 0.4
ERCC2-211ENST00000588652 MRPS22P82650 360 aaKnown RBP17.57■□□□□ 0.4
ERCC2-211ENST00000588652 ART3Q13508 389 aa17.57■□□□□ 0.4
ERCC2-211ENST00000588652 PTPRCAPQ14761 206 aa17.57■□□□□ 0.4
ERCC2-211ENST00000588652 TRIM67Q6ZTA4 783 aa17.57■□□□□ 0.4
ERCC2-211ENST00000588652 PIWIL4Q7Z3Z4 852 aaKnown RBP17.57■□□□□ 0.4
ERCC2-211ENST00000588652 ICA1LQ8NDH6 482 aa17.57■□□□□ 0.4
ERCC2-211ENST00000588652 BRSK1Q8TDC3 778 aa17.57■□□□□ 0.4
ERCC2-211ENST00000588652 USP13Q92995 863 aaPredicted RBP17.57■□□□□ 0.4
ERCC2-211ENST00000588652 DNAJC1Q96KC8 554 aaKnown RBP17.57■□□□□ 0.4
ERCC2-211ENST00000588652 PSKH2Q96QS6 385 aa17.57■□□□□ 0.4
ERCC2-211ENST00000588652 EFCAB1Q9HAE3 211 aa17.57■□□□□ 0.4
ERCC2-211ENST00000588652 PAK6Q9NQU5 681 aaPredicted RBP17.57■□□□□ 0.4
ERCC2-211ENST00000588652 CAPN8A6NHC0 703 aa17.57■□□□□ 0.4
ERCC2-211ENST00000588652 CFLARO15519 480 aa17.57■□□□□ 0.4
ERCC2-211ENST00000588652 STC2O76061 302 aa17.57■□□□□ 0.4
ERCC2-211ENST00000588652 MSX2P35548 267 aaPredicted RBP17.57■□□□□ 0.4
ERCC2-211ENST00000588652 MS4A2Q01362 244 aa17.57■□□□□ 0.4
ERCC2-211ENST00000588652 RFTN1Q14699 578 aaPredicted RBP17.57■□□□□ 0.4
ERCC2-211ENST00000588652 BBS5Q8N3I7 341 aa17.57■□□□□ 0.4
ERCC2-211ENST00000588652 ZNF461Q8TAF7 563 aa17.57■□□□□ 0.4
ERCC2-211ENST00000588652 ANKRD49Q8WVL7 239 aa17.57■□□□□ 0.4
ERCC2-211ENST00000588652 PLD4Q96BZ4 506 aa17.57■□□□□ 0.4
ERCC2-211ENST00000588652 DCUN1D1Q96GG9 259 aa17.57■□□□□ 0.4
ERCC2-211ENST00000588652 TRIB3Q96RU7 358 aa17.57■□□□□ 0.4
ERCC2-211ENST00000588652 SPON2Q9BUD6 331 aa17.57■□□□□ 0.4
ERCC2-211ENST00000588652 GKN1Q9NS71 199 aa17.57■□□□□ 0.4
ERCC2-211ENST00000588652 SEPT3Q9UH03 358 aa17.57■□□□□ 0.4
ERCC2-211ENST00000588652 TCAF2A6NFQ2 919 aa17.56■□□□□ 0.4
ERCC2-211ENST00000588652 STX16-NPEPL1H3BU86 382 aa17.56■□□□□ 0.4
ERCC2-211ENST00000588652 CLDN11O75508 207 aa17.56■□□□□ 0.4
ERCC2-211ENST00000588652 WISP3O95389 354 aaPredicted RBP17.56■□□□□ 0.4
ERCC2-211ENST00000588652 GOT2P00505 430 aaKnown RBP17.56■□□□□ 0.4
ERCC2-211ENST00000588652 PIRTP0C851 137 aa17.56■□□□□ 0.4
ERCC2-211ENST00000588652 CORO1AP31146 461 aaKnown RBP17.56■□□□□ 0.4
ERCC2-211ENST00000588652 SGSHP51688 502 aa17.56■□□□□ 0.4
ERCC2-211ENST00000588652 CDKN2DP55273 166 aa17.56■□□□□ 0.4
ERCC2-211ENST00000588652 PFKPQ01813 784 aa17.56■□□□□ 0.4
ERCC2-211ENST00000588652 FOLH1Q04609 750 aa17.56■□□□□ 0.4
ERCC2-211ENST00000588652 LAMB3Q13751 1172 aa17.56■□□□□ 0.4
ERCC2-211ENST00000588652 PDK3Q15120 406 aa17.56■□□□□ 0.4
ERCC2-211ENST00000588652 PELI3Q8N2H9 469 aa17.56■□□□□ 0.4
ERCC2-211ENST00000588652 AFAP1L2Q8N4X5 818 aa17.56■□□□□ 0.4
ERCC2-211ENST00000588652 GCNAQ96QF7 691 aa17.56■□□□□ 0.4
ERCC2-211ENST00000588652 GTSE1Q9NYZ3 720 aa17.56■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms