RNA–Protein interactions for RNA: ENST00000588554.1

GPATCH8-206, Transcript of G-patch domain containing 8, humanhuman

TSL 2

Gene GPATCH8, Length 565 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPATCH8-206ENST00000588554 CLEC17AQ6ZS10 378 aa7.59□□□□□ -1.19
GPATCH8-206ENST00000588554 RBM43Q6ZSC3 357 aaKnown RBP7.59□□□□□ -1.19
GPATCH8-206ENST00000588554 CYP4V2Q6ZWL3 525 aaPredicted RBP7.59□□□□□ -1.19
GPATCH8-206ENST00000588554 ZNF843Q8N446 348 aa7.59□□□□□ -1.19
GPATCH8-206ENST00000588554 NPWQ8N729 165 aa7.59□□□□□ -1.19
GPATCH8-206ENST00000588554 Q8N9G6 341 aaPredicted RBP7.59□□□□□ -1.19
GPATCH8-206ENST00000588554 KYQ8NBH2 561 aa7.59□□□□□ -1.19
GPATCH8-206ENST00000588554 ZNF248Q8NDW4 579 aa7.59□□□□□ -1.19
GPATCH8-206ENST00000588554 CCL4L1Q8NHW4 92 aa7.59□□□□□ -1.19
GPATCH8-206ENST00000588554 PCDH19Q8TAB3 1148 aa7.59□□□□□ -1.19
GPATCH8-206ENST00000588554 BTN2A2Q8WVV5 523 aa7.59□□□□□ -1.19
GPATCH8-206ENST00000588554 CCDC74AQ96AQ1 378 aa7.59□□□□□ -1.19
GPATCH8-206ENST00000588554 SLC46A1Q96NT5 459 aa7.59□□□□□ -1.19
GPATCH8-206ENST00000588554 NCAPGQ9BPX3 1015 aa7.59□□□□□ -1.19
GPATCH8-206ENST00000588554 SYT11Q9BT88 431 aa7.59□□□□□ -1.19
GPATCH8-206ENST00000588554 APOOQ9BUR5 198 aa7.59□□□□□ -1.19
GPATCH8-206ENST00000588554 LGR4Q9BXB1 951 aa7.59□□□□□ -1.19
GPATCH8-206ENST00000588554 CPEB1Q9BZB8 566 aaKnown RBP7.59□□□□□ -1.19
GPATCH8-206ENST00000588554 FOXP3Q9BZS1 431 aa7.59□□□□□ -1.19
GPATCH8-206ENST00000588554 SLC13A1Q9BZW2 595 aa7.59□□□□□ -1.19
GPATCH8-206ENST00000588554 SEMA4CQ9C0C4 833 aa7.59□□□□□ -1.19
GPATCH8-206ENST00000588554 DHX35Q9H5Z1 703 aaKnown RBP7.59□□□□□ -1.19
GPATCH8-206ENST00000588554 RETREG1Q9H6L5 497 aa7.59□□□□□ -1.19
GPATCH8-206ENST00000588554 DKK3Q9UBP4 350 aa7.59□□□□□ -1.19
GPATCH8-206ENST00000588554 UBA2Q9UBT2 640 aaPredicted RBP7.59□□□□□ -1.19
GPATCH8-206ENST00000588554 GCN1Q92616 2671 aaKnown RBP7.59□□□□□ -1.19
GPATCH8-206ENST00000588554 KNTC1P50748 2209 aa7.59□□□□□ -1.19
GPATCH8-206ENST00000588554 LOC400499M0QZD8 3231 aa7.59□□□□□ -1.19
GPATCH8-206ENST00000588554 CHD5Q8TDI0 1954 aa7.59□□□□□ -1.2
GPATCH8-206ENST00000588554 SMG1Q96Q15 3661 aaKnown RBP7.58□□□□□ -1.2
GPATCH8-206ENST00000588554 A0A1W2PQM1 296 aa7.58□□□□□ -1.2
GPATCH8-206ENST00000588554 TSPAN11A1L157 253 aa7.58□□□□□ -1.2
GPATCH8-206ENST00000588554 ANKRD62A6NC57 917 aa7.58□□□□□ -1.2
GPATCH8-206ENST00000588554 TMEM191CA6NGB0 347 aa7.58□□□□□ -1.2
GPATCH8-206ENST00000588554 ZSCAN5CA6NGD5 496 aaPredicted RBP7.58□□□□□ -1.2
GPATCH8-206ENST00000588554 LRRC53A6NM62 1247 aa7.58□□□□□ -1.2
GPATCH8-206ENST00000588554 DFFAO00273 331 aa7.58□□□□□ -1.2
GPATCH8-206ENST00000588554 EEF2KO00418 725 aaKnown RBP7.58□□□□□ -1.2
GPATCH8-206ENST00000588554 PRAMEF11O60813 436 aa7.58□□□□□ -1.2
GPATCH8-206ENST00000588554 PALMO75781 387 aa7.58□□□□□ -1.2
GPATCH8-206ENST00000588554 TNFSF15O95150 251 aa7.58□□□□□ -1.2
GPATCH8-206ENST00000588554 FUCA1P04066 466 aa7.58□□□□□ -1.2
GPATCH8-206ENST00000588554 RPLP0P05388 317 aaKnown RBP7.58□□□□□ -1.2
GPATCH8-206ENST00000588554 TPM2P07951 284 aa7.58□□□□□ -1.2
GPATCH8-206ENST00000588554 SKILP12757 684 aa7.58□□□□□ -1.2
GPATCH8-206ENST00000588554 CTSEP14091 401 aa7.58□□□□□ -1.2
GPATCH8-206ENST00000588554 GM2AP17900 193 aa7.58□□□□□ -1.2
GPATCH8-206ENST00000588554 ERCC2P18074 760 aa7.58□□□□□ -1.2
GPATCH8-206ENST00000588554 TNFAIP3P21580 790 aa7.58□□□□□ -1.2
GPATCH8-206ENST00000588554 PSMA2P25787 234 aa7.58□□□□□ -1.2
GPATCH8-206ENST00000588554 RBMS1P29558 406 aaKnown RBP7.58□□□□□ -1.2
GPATCH8-206ENST00000588554 TPI1P60174 286 aa7.58□□□□□ -1.2
GPATCH8-206ENST00000588554 ERVPABLB-1P60509 514 aa7.58□□□□□ -1.2
GPATCH8-206ENST00000588554 SRP54P61011 504 aaKnown RBP7.58□□□□□ -1.2
GPATCH8-206ENST00000588554 YPEL5P62699 121 aa7.58□□□□□ -1.2
GPATCH8-206ENST00000588554 CCL7P80098 99 aa7.58□□□□□ -1.2
GPATCH8-206ENST00000588554 RAD51Q06609 339 aa7.58□□□□□ -1.2
GPATCH8-206ENST00000588554 SLC10A7Q0GE19 358 aa7.58□□□□□ -1.2
GPATCH8-206ENST00000588554 C19orf57Q0VDD7 668 aa7.58□□□□□ -1.2
GPATCH8-206ENST00000588554 RALGDSQ12967 914 aa7.58□□□□□ -1.2
GPATCH8-206ENST00000588554 SRSF6Q13247 344 aaKnown RBP7.58□□□□□ -1.2
GPATCH8-206ENST00000588554 TGIF1Q15583 401 aa7.58□□□□□ -1.2
GPATCH8-206ENST00000588554 PPP6R3Q5H9R7 873 aaPredicted RBP7.58□□□□□ -1.2
GPATCH8-206ENST00000588554 FAM182AQ5T1J6 154 aa7.58□□□□□ -1.2
GPATCH8-206ENST00000588554 ERMARDQ5T6L9 678 aa7.58□□□□□ -1.2
GPATCH8-206ENST00000588554 MACC1Q6ZN28 852 aa7.58□□□□□ -1.2
GPATCH8-206ENST00000588554 RBM44Q6ZP01 1051 aaKnown RBP7.58□□□□□ -1.2
GPATCH8-206ENST00000588554 RFX8Q6ZV50 586 aa7.58□□□□□ -1.2
GPATCH8-206ENST00000588554 SRLQ86TD4 932 aa7.58□□□□□ -1.2
GPATCH8-206ENST00000588554 ARHGAP12Q8IWW6 846 aa7.58□□□□□ -1.2
GPATCH8-206ENST00000588554 AOPEPQ8N6M6 819 aa7.58□□□□□ -1.2
GPATCH8-206ENST00000588554 DENND6BQ8NEG7 585 aa7.58□□□□□ -1.2
GPATCH8-206ENST00000588554 KCNE4Q8WWG9 221 aa7.58□□□□□ -1.2
GPATCH8-206ENST00000588554 CASKIN2Q8WXE0 1202 aa7.58□□□□□ -1.2
GPATCH8-206ENST00000588554 OR1E3Q8WZA6 343 aa7.58□□□□□ -1.2
GPATCH8-206ENST00000588554 ARHGEF26Q96DR7 871 aa7.58□□□□□ -1.2
GPATCH8-206ENST00000588554 PDXPQ96GD0 296 aa7.58□□□□□ -1.2
GPATCH8-206ENST00000588554 SMIM14Q96QK8 99 aa7.58□□□□□ -1.2
GPATCH8-206ENST00000588554 ERGIC2Q96RQ1 377 aa7.58□□□□□ -1.2
GPATCH8-206ENST00000588554 SPOCK3Q9BQ16 436 aa7.58□□□□□ -1.2
GPATCH8-206ENST00000588554 SNRNP25Q9BV90 132 aaKnown RBP7.58□□□□□ -1.2
GPATCH8-206ENST00000588554 EDEM3Q9BZQ6 932 aa7.58□□□□□ -1.2
GPATCH8-206ENST00000588554 HAUS4Q9H6D7 363 aa7.58□□□□□ -1.2
GPATCH8-206ENST00000588554 SUDS3Q9H7L9 328 aaPredicted RBP7.58□□□□□ -1.2
GPATCH8-206ENST00000588554 CATSPERBQ9H7T0 1116 aa7.58□□□□□ -1.2
GPATCH8-206ENST00000588554 USP29Q9HBJ7 922 aa7.58□□□□□ -1.2
GPATCH8-206ENST00000588554 EPB41L5Q9HCM4 733 aa7.58□□□□□ -1.2
GPATCH8-206ENST00000588554 ETNK2Q9NVF9 386 aa7.58□□□□□ -1.2
GPATCH8-206ENST00000588554 CWC15Q9P013 229 aaKnown RBP7.58□□□□□ -1.2
GPATCH8-206ENST00000588554 GPR34Q9UPC5 381 aa7.58□□□□□ -1.2
GPATCH8-206ENST00000588554 AP4E1Q9UPM8 1137 aa7.58□□□□□ -1.2
GPATCH8-206ENST00000588554 BPTFQ12830 3046 aa7.57□□□□□ -1.2
GPATCH8-206ENST00000588554 TGFBR3LH3BV60 316 aa7.57□□□□□ -1.2
GPATCH8-206ENST00000588554 DAPK3O43293 454 aa7.57□□□□□ -1.2
GPATCH8-206ENST00000588554 RECQL5O94762 991 aaPredicted RBP7.57□□□□□ -1.2
GPATCH8-206ENST00000588554 RASGRP1O95267 797 aa7.57□□□□□ -1.2
GPATCH8-206ENST00000588554 FTLP02792 175 aaPredicted RBP7.57□□□□□ -1.2
GPATCH8-206ENST00000588554 FERP16591 822 aa7.57□□□□□ -1.2
GPATCH8-206ENST00000588554 IL1R2P27930 398 aa7.57□□□□□ -1.2
GPATCH8-206ENST00000588554 MIPP30301 263 aa7.57□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms