RNA–Protein interactions for RNA: ENST00000587730.5

DDX39A-206, Transcript of DExD-box helicase 39A, humanhuman

TSL 1 (best)

Gene DDX39A, Length 1,813 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-206ENST00000587730 TRIM54Q9BYV2 358 aa18.6■□□□□ 0.57
DDX39A-206ENST00000587730 ZCWPW1Q9H0M4 648 aa18.6■□□□□ 0.57
DDX39A-206ENST00000587730 ZNF408Q9H9D4 720 aa18.6■□□□□ 0.57
DDX39A-206ENST00000587730 CCL15-CCL14A0A0B4J2E2 113 aa18.6■□□□□ 0.57
DDX39A-206ENST00000587730 A0A0J9YYE9 177 aa18.6■□□□□ 0.57
DDX39A-206ENST00000587730 ARL5CA6NH57 179 aa18.6■□□□□ 0.57
DDX39A-206ENST00000587730 H3BSA7 217 aa18.6■□□□□ 0.57
DDX39A-206ENST00000587730 KPNA6O60684 536 aa18.6■□□□□ 0.57
DDX39A-206ENST00000587730 S1PR4O95977 384 aa18.6■□□□□ 0.57
DDX39A-206ENST00000587730 CDK4P11802 303 aa18.6■□□□□ 0.57
DDX39A-206ENST00000587730 FDXRP22570 491 aa18.6■□□□□ 0.57
DDX39A-206ENST00000587730 SUOXP51687 545 aa18.6■□□□□ 0.57
DDX39A-206ENST00000587730 RABGGTBP53611 331 aa18.6■□□□□ 0.57
DDX39A-206ENST00000587730 PRKCQQ04759 706 aa18.6■□□□□ 0.57
DDX39A-206ENST00000587730 ACVR1Q04771 509 aa18.6■□□□□ 0.57
DDX39A-206ENST00000587730 CCL15Q16663 113 aa18.6■□□□□ 0.57
DDX39A-206ENST00000587730 UGT3A2Q3SY77 523 aa18.6■□□□□ 0.57
DDX39A-206ENST00000587730 UNC50Q53HI1 259 aa18.6■□□□□ 0.57
DDX39A-206ENST00000587730 TBCELQ5QJ74 424 aa18.6■□□□□ 0.57
DDX39A-206ENST00000587730 OR13J1Q8NGT2 312 aa18.6■□□□□ 0.57
DDX39A-206ENST00000587730 NPLOC4Q8TAT6 608 aa18.6■□□□□ 0.57
DDX39A-206ENST00000587730 CENPNQ96H22 339 aaPredicted RBP18.6■□□□□ 0.57
DDX39A-206ENST00000587730 RTP3Q9BQQ7 232 aa18.6■□□□□ 0.57
DDX39A-206ENST00000587730 YTHDF1Q9BYJ9 559 aaKnown RBP18.6■□□□□ 0.57
DDX39A-206ENST00000587730 ALG9Q9H6U8 611 aa18.6■□□□□ 0.57
DDX39A-206ENST00000587730 RGS18Q9NS28 235 aa18.6■□□□□ 0.57
DDX39A-206ENST00000587730 DDX18Q9NVP1 670 aaKnown RBP18.6■□□□□ 0.57
DDX39A-206ENST00000587730 M0QZQ0 153 aa18.59■□□□□ 0.57
DDX39A-206ENST00000587730 AZIN1O14977 448 aa18.59■□□□□ 0.57
DDX39A-206ENST00000587730 UMPSP11172 480 aa18.59■□□□□ 0.57
DDX39A-206ENST00000587730 LBPP18428 481 aa18.59■□□□□ 0.57
DDX39A-206ENST00000587730 GRIA3P42263 894 aa18.59■□□□□ 0.57
DDX39A-206ENST00000587730 ZBED5Q49AG3 693 aa18.59■□□□□ 0.57
DDX39A-206ENST00000587730 AASDHQ4L235 1098 aaPredicted RBP18.59■□□□□ 0.57
DDX39A-206ENST00000587730 TMTC4Q5T4D3 741 aa18.59■□□□□ 0.57
DDX39A-206ENST00000587730 HMBOX1Q6NT76 420 aa18.59■□□□□ 0.57
DDX39A-206ENST00000587730 SPATA19Q7Z5L4 167 aa18.59■□□□□ 0.57
DDX39A-206ENST00000587730 GPR141Q7Z602 305 aa18.59■□□□□ 0.57
DDX39A-206ENST00000587730 MRPL10Q7Z7H8 261 aaKnown RBP18.59■□□□□ 0.57
DDX39A-206ENST00000587730 FIBCD1Q8N539 461 aa18.59■□□□□ 0.57
DDX39A-206ENST00000587730 GAB3Q8WWW8 586 aa18.59■□□□□ 0.57
DDX39A-206ENST00000587730 MS4A4AQ96JQ5 239 aa18.59■□□□□ 0.57
DDX39A-206ENST00000587730 TFB2MQ9H5Q4 396 aaKnown RBP18.59■□□□□ 0.57
DDX39A-206ENST00000587730 AKTIPQ9H8T0 292 aa18.59■□□□□ 0.57
DDX39A-206ENST00000587730 AGPAT4Q9NRZ5 378 aa18.59■□□□□ 0.57
DDX39A-206ENST00000587730 HSFX1Q9UBD0 423 aa18.59■□□□□ 0.57
DDX39A-206ENST00000587730 SHROOM3Q8TF72 1996 aa18.59■□□□□ 0.57
DDX39A-206ENST00000587730 TRIM64A6NGJ6 449 aa18.58■□□□□ 0.57
DDX39A-206ENST00000587730 ZNF839A8K0R7 811 aa18.58■□□□□ 0.57
DDX39A-206ENST00000587730 AURKAO14965 403 aa18.58■□□□□ 0.57
DDX39A-206ENST00000587730 CLASP2O75122 1294 aaKnown RBP18.58■□□□□ 0.57
DDX39A-206ENST00000587730 OGNP20774 298 aaKnown RBP18.58■□□□□ 0.57
DDX39A-206ENST00000587730 RAB15P59190 212 aa18.58■□□□□ 0.57
DDX39A-206ENST00000587730 PCSK7Q16549 785 aa18.58■□□□□ 0.57
DDX39A-206ENST00000587730 KANK2Q63ZY3 851 aa18.58■□□□□ 0.57
DDX39A-206ENST00000587730 CYP2R1Q6VVX0 501 aa18.58■□□□□ 0.57
DDX39A-206ENST00000587730 CTU1Q7Z7A3 348 aaKnown RBP18.58■□□□□ 0.57
DDX39A-206ENST00000587730 FUNDC1Q8IVP5 155 aa18.58■□□□□ 0.57
DDX39A-206ENST00000587730 MYO1HQ8N1T3 1032 aa18.58■□□□□ 0.57
DDX39A-206ENST00000587730 TEX26Q8N6G2 289 aa18.58■□□□□ 0.57
DDX39A-206ENST00000587730 C3orf58Q8NDZ4 430 aa18.58■□□□□ 0.57
DDX39A-206ENST00000587730 OR6P1Q8NGX9 317 aa18.58■□□□□ 0.57
DDX39A-206ENST00000587730 CANT1Q8WVQ1 401 aa18.58■□□□□ 0.57
DDX39A-206ENST00000587730 TADA1Q96BN2 335 aa18.58■□□□□ 0.57
DDX39A-206ENST00000587730 SLC29A1Q99808 456 aa18.58■□□□□ 0.57
DDX39A-206ENST00000587730 UNKQ9C0B0 810 aaKnown RBP18.58■□□□□ 0.57
DDX39A-206ENST00000587730 SDR39U1Q9NRG7 319 aaPredicted RBP18.58■□□□□ 0.57
DDX39A-206ENST00000587730 DUS2Q9NX74 493 aaKnown RBP18.58■□□□□ 0.57
DDX39A-206ENST00000587730 TLR6Q9Y2C9 796 aa18.58■□□□□ 0.57
DDX39A-206ENST00000587730 UBFD1O14562 309 aaKnown RBP18.58■□□□□ 0.56
DDX39A-206ENST00000587730 PEX11BO96011 259 aa18.58■□□□□ 0.56
DDX39A-206ENST00000587730 TYMPP19971 482 aa18.58■□□□□ 0.56
DDX39A-206ENST00000587730 PLK1P53350 603 aa18.58■□□□□ 0.56
DDX39A-206ENST00000587730 LPIN1Q14693 890 aa18.58■□□□□ 0.56
DDX39A-206ENST00000587730 RPS6KA2Q15349 733 aa18.58■□□□□ 0.56
DDX39A-206ENST00000587730 OGFOD2Q6N063 350 aa18.58■□□□□ 0.56
DDX39A-206ENST00000587730 MSANTD2Q6P1R3 559 aa18.58■□□□□ 0.56
DDX39A-206ENST00000587730 SPATA2LQ8IUW3 424 aaPredicted RBP18.58■□□□□ 0.56
DDX39A-206ENST00000587730 LEMD2Q8NC56 503 aa18.58■□□□□ 0.56
DDX39A-206ENST00000587730 ZNF420Q8TAQ5 688 aaPredicted RBP18.58■□□□□ 0.56
DDX39A-206ENST00000587730 RNF217Q8TC41 542 aa18.58■□□□□ 0.56
DDX39A-206ENST00000587730 ANKRD49Q8WVL7 239 aa18.58■□□□□ 0.56
DDX39A-206ENST00000587730 FAM210AQ96ND0 272 aa18.58■□□□□ 0.56
DDX39A-206ENST00000587730 ATXN3LQ9H3M9 355 aa18.58■□□□□ 0.56
DDX39A-206ENST00000587730 TNFRSF12AQ9NP84 129 aa18.58■□□□□ 0.56
DDX39A-206ENST00000587730 TMEM248Q9NWD8 314 aa18.58■□□□□ 0.56
DDX39A-206ENST00000587730 GALNT8Q9NY28 637 aa18.58■□□□□ 0.56
DDX39A-206ENST00000587730 ST3GAL5Q9UNP4 418 aa18.58■□□□□ 0.56
DDX39A-206ENST00000587730 HS3ST4Q9Y661 456 aa18.58■□□□□ 0.56
DDX39A-206ENST00000587730 NR5A2O00482 541 aa18.57■□□□□ 0.56
DDX39A-206ENST00000587730 SNAP91O60641 907 aa18.57■□□□□ 0.56
DDX39A-206ENST00000587730 TIPRLO75663 272 aa18.57■□□□□ 0.56
DDX39A-206ENST00000587730 GLP2RO95838 553 aa18.57■□□□□ 0.56
DDX39A-206ENST00000587730 NPPAP01160 153 aa18.57■□□□□ 0.56
DDX39A-206ENST00000587730 EPOP01588 193 aa18.57■□□□□ 0.56
DDX39A-206ENST00000587730 CD1DP15813 335 aa18.57■□□□□ 0.56
DDX39A-206ENST00000587730 HLA-DPA1P20036 260 aa18.57■□□□□ 0.56
DDX39A-206ENST00000587730 YWHAQP27348 245 aa18.57■□□□□ 0.56
DDX39A-206ENST00000587730 SLC5A3P53794 718 aa18.57■□□□□ 0.56
DDX39A-206ENST00000587730 MTA1Q13330 715 aa18.57■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms