RNA–Protein interactions for RNA: ENST00000587163.1

NPC1-205, Transcript of NPC intracellular cholesterol transporter 1, humanhuman

TSL 2

Gene NPC1, Length 431 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1-205ENST00000587163 ARHGAP12Q8IWW6 846 aa16.35■□□□□ 0.21
NPC1-205ENST00000587163 PATE1Q8WXA2 126 aa16.35■□□□□ 0.21
NPC1-205ENST00000587163 CCDC74BQ96LY2 380 aa16.35■□□□□ 0.21
NPC1-205ENST00000587163 COQ10AQ96MF6 247 aa16.35■□□□□ 0.21
NPC1-205ENST00000587163 SIK3Q9Y2K2 1263 aa16.35■□□□□ 0.21
NPC1-205ENST00000587163 ARHGAP42A6NI28 874 aa16.34■□□□□ 0.21
NPC1-205ENST00000587163 STMND1H3BQB6 276 aa16.34■□□□□ 0.21
NPC1-205ENST00000587163 ECEL1O95672 775 aa16.34■□□□□ 0.21
NPC1-205ENST00000587163 SCNN1BP51168 640 aa16.34■□□□□ 0.21
NPC1-205ENST00000587163 POLR2LP62875 67 aaKnown RBP16.34■□□□□ 0.21
NPC1-205ENST00000587163 NSUN2Q08J23 767 aaKnown RBP eCLIP16.34■□□□□ 0.21
NPC1-205ENST00000587163 KRT31Q15323 416 aa16.34■□□□□ 0.21
NPC1-205ENST00000587163 NKAIN2Q5VXU1 208 aa16.34■□□□□ 0.21
NPC1-205ENST00000587163 PTRH1Q86Y79 214 aaKnown RBP16.34■□□□□ 0.21
NPC1-205ENST00000587163 TP53INP2Q8IXH6 220 aa16.34■□□□□ 0.21
NPC1-205ENST00000587163 TAAR9Q96RI9 348 aa16.34■□□□□ 0.21
NPC1-205ENST00000587163 CINPQ9BW66 212 aaPredicted RBP16.34■□□□□ 0.21
NPC1-205ENST00000587163 AKAP7Q9P0M2 348 aaPredicted RBP16.34■□□□□ 0.21
NPC1-205ENST00000587163 TAAR2Q9P1P5 351 aa16.34■□□□□ 0.21
NPC1-205ENST00000587163 B4GALT6Q9UBX8 382 aa16.34■□□□□ 0.21
NPC1-205ENST00000587163 DACH1Q9UI36 760 aa16.34■□□□□ 0.21
NPC1-205ENST00000587163 AP4E1Q9UPM8 1137 aa16.34■□□□□ 0.21
NPC1-205ENST00000587163 ZFC3H1O60293 1989 aaKnown RBP16.33■□□□□ 0.21
NPC1-205ENST00000587163 PDE2AO00408 941 aaPredicted RBP16.33■□□□□ 0.2
NPC1-205ENST00000587163 HGSO14964 777 aaPredicted RBP16.33■□□□□ 0.2
NPC1-205ENST00000587163 PPM1DO15297 605 aa16.33■□□□□ 0.2
NPC1-205ENST00000587163 MYCLP1P12525 358 aaPredicted RBP16.33■□□□□ 0.2
NPC1-205ENST00000587163 MPSTP25325 297 aa16.33■□□□□ 0.2
NPC1-205ENST00000587163 HTR7P34969 479 aa16.33■□□□□ 0.2
NPC1-205ENST00000587163 LIMK2P53671 638 aa16.33■□□□□ 0.2
NPC1-205ENST00000587163 TSR1Q2NL82 804 aaKnown RBP16.33■□□□□ 0.2
NPC1-205ENST00000587163 CDKAL1Q5VV42 579 aa16.33■□□□□ 0.2
NPC1-205ENST00000587163 SLC30A9Q6PML9 568 aa16.33■□□□□ 0.2
NPC1-205ENST00000587163 HEATR4Q86WZ0 1026 aa16.33■□□□□ 0.2
NPC1-205ENST00000587163 ARFGAP1Q8N6T3 406 aa16.33■□□□□ 0.2
NPC1-205ENST00000587163 NPWQ8N729 165 aa16.33■□□□□ 0.2
NPC1-205ENST00000587163 PAF1Q8N7H5 531 aa16.33■□□□□ 0.2
NPC1-205ENST00000587163 TEX101Q9BY14 249 aa16.33■□□□□ 0.2
NPC1-205ENST00000587163 GSDMCQ9BYG8 508 aa16.33■□□□□ 0.2
NPC1-205ENST00000587163 FRMD8Q9BZ67 464 aaPredicted RBP16.33■□□□□ 0.2
NPC1-205ENST00000587163 DHX35Q9H5Z1 703 aaKnown RBP16.33■□□□□ 0.2
NPC1-205ENST00000587163 SEPT11Q9NVA2 429 aaKnown RBP16.33■□□□□ 0.2
NPC1-205ENST00000587163 PCDHGA3Q9Y5H0 932 aa16.33■□□□□ 0.2
NPC1-205ENST00000587163 B3GALT1Q9Y5Z6 326 aa16.33■□□□□ 0.2
NPC1-205ENST00000587163 ANKRD62A6NC57 917 aa16.32■□□□□ 0.2
NPC1-205ENST00000587163 DFFAO00273 331 aa16.32■□□□□ 0.2
NPC1-205ENST00000587163 EEF2KO00418 725 aaKnown RBP16.32■□□□□ 0.2
NPC1-205ENST00000587163 LIFP15018 202 aa16.32■□□□□ 0.2
NPC1-205ENST00000587163 ERCC2P18074 760 aa16.32■□□□□ 0.2
NPC1-205ENST00000587163 UGT1A3P35503 534 aa16.32■□□□□ 0.2
NPC1-205ENST00000587163 GNPDA1P46926 289 aa16.32■□□□□ 0.2
NPC1-205ENST00000587163 POLD2P49005 469 aa16.32■□□□□ 0.2
NPC1-205ENST00000587163 CTBSQ01459 385 aa16.32■□□□□ 0.2
NPC1-205ENST00000587163 ILF3Q12906 894 aaKnown RBP eCLIP16.32■□□□□ 0.2
NPC1-205ENST00000587163 PTPRRQ15256 657 aa16.32■□□□□ 0.2
NPC1-205ENST00000587163 CNGA3Q16281 694 aa16.32■□□□□ 0.2
NPC1-205ENST00000587163 DENND2CQ68D51 928 aa16.32■□□□□ 0.2
NPC1-205ENST00000587163 BORAQ6PGQ7 559 aa16.32■□□□□ 0.2
NPC1-205ENST00000587163 DCUN1D2Q6PH85 259 aa16.32■□□□□ 0.2
NPC1-205ENST00000587163 NAGSQ8N159 534 aa16.32■□□□□ 0.2
NPC1-205ENST00000587163 CBARPQ8N350 705 aaPredicted RBP16.32■□□□□ 0.2
NPC1-205ENST00000587163 ART4Q93070 314 aa16.32■□□□□ 0.2
NPC1-205ENST00000587163 NUS1Q96E22 293 aa16.32■□□□□ 0.2
NPC1-205ENST00000587163 PEBP4Q96S96 227 aa16.32■□□□□ 0.2
NPC1-205ENST00000587163 KCTD15Q96SI1 283 aaPredicted RBP16.32■□□□□ 0.2
NPC1-205ENST00000587163 AGPAT1Q99943 283 aa16.32■□□□□ 0.2
NPC1-205ENST00000587163 ADNPQ9H2P0 1102 aa16.32■□□□□ 0.2
NPC1-205ENST00000587163 SP110Q9HB58 689 aa16.32■□□□□ 0.2
NPC1-205ENST00000587163 TRNAU1APQ9NX07 287 aaKnown RBP16.32■□□□□ 0.2
NPC1-205ENST00000587163 DONSONQ9NYP3 566 aa16.32■□□□□ 0.2
NPC1-205ENST00000587163 TMEM9Q9P0T7 183 aa16.32■□□□□ 0.2
NPC1-205ENST00000587163 SUFUQ9UMX1 484 aa16.32■□□□□ 0.2
NPC1-205ENST00000587163 PLEKHM1Q9Y4G2 1056 aa16.32■□□□□ 0.2
NPC1-205ENST00000587163 PCDHGC4Q9Y5F7 938 aa16.32■□□□□ 0.2
NPC1-205ENST00000587163 CSF2RBP32927 897 aa16.31■□□□□ 0.2
NPC1-205ENST00000587163 ETV3P41162 512 aa16.31■□□□□ 0.2
NPC1-205ENST00000587163 GPR3P46089 330 aa16.31■□□□□ 0.2
NPC1-205ENST00000587163 ATP1A2P50993 1020 aa16.31■□□□□ 0.2
NPC1-205ENST00000587163 AP1S1P61966 158 aa16.31■□□□□ 0.2
NPC1-205ENST00000587163 IL10RBQ08334 325 aa16.31■□□□□ 0.2
NPC1-205ENST00000587163 SLC10A7Q0GE19 358 aa16.31■□□□□ 0.2
NPC1-205ENST00000587163 RFTN1Q14699 578 aaPredicted RBP16.31■□□□□ 0.2
NPC1-205ENST00000587163 SYCP1Q15431 976 aa16.31■□□□□ 0.2
NPC1-205ENST00000587163 CLPPQ16740 277 aaPredicted RBP16.31■□□□□ 0.2
NPC1-205ENST00000587163 SKIDA1Q1XH10 827 aa16.31■□□□□ 0.2
NPC1-205ENST00000587163 RFX8Q6ZV50 586 aa16.31■□□□□ 0.2
NPC1-205ENST00000587163 HSD11B1LQ7Z5J1 315 aa16.31■□□□□ 0.2
NPC1-205ENST00000587163 MCOLN2Q8IZK6 566 aa16.31■□□□□ 0.2
NPC1-205ENST00000587163 IL22RA1Q8N6P7 574 aa16.31■□□□□ 0.2
NPC1-205ENST00000587163 ZNF564Q8TBZ8 553 aaPredicted RBP16.31■□□□□ 0.2
NPC1-205ENST00000587163 ENOX1Q8TC92 643 aaKnown RBP16.31■□□□□ 0.2
NPC1-205ENST00000587163 PSKH2Q96QS6 385 aa16.31■□□□□ 0.2
NPC1-205ENST00000587163 PHPT1Q9NRX4 125 aaPredicted RBP16.31■□□□□ 0.2
NPC1-205ENST00000587163 OCIAD1Q9NX40 245 aa16.31■□□□□ 0.2
NPC1-205ENST00000587163 PCSK1NQ9UHG2 260 aa16.31■□□□□ 0.2
NPC1-205ENST00000587163 DOPEY2Q9Y3R5 2298 aa16.31■□□□□ 0.2
NPC1-205ENST00000587163 IGHV1OR21-1A0A087WYE8 117 aa16.3■□□□□ 0.2
NPC1-205ENST00000587163 DAPK3O43293 454 aa16.3■□□□□ 0.2
NPC1-205ENST00000587163 HTRA2O43464 458 aaPredicted RBP16.3■□□□□ 0.2
NPC1-205ENST00000587163 HEXIM1O94992 359 aaKnown RBP16.3■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms