RNA–Protein interactions for RNA: ENST00000585799.5

SMARCA4-208, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 2

Gene SMARCA4, Length 3,842 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-208ENST00000585799 KYQ8NBH2 561 aa12.46□□□□□ -0.41
SMARCA4-208ENST00000585799 C1orf74Q96LT6 269 aa12.46□□□□□ -0.41
SMARCA4-208ENST00000585799 OLFM1Q99784 485 aa12.46□□□□□ -0.41
SMARCA4-208ENST00000585799 BBS2Q9BXC9 721 aa12.46□□□□□ -0.41
SMARCA4-208ENST00000585799 RNF38Q9H0F5 515 aa12.46□□□□□ -0.41
SMARCA4-208ENST00000585799 WWOXQ9NZC7 414 aa12.46□□□□□ -0.41
SMARCA4-208ENST00000585799 DICER1Q9UPY3 1922 aaKnown RBP12.46□□□□□ -0.41
SMARCA4-208ENST00000585799 INPPL1O15357 1258 aa12.46□□□□□ -0.41
SMARCA4-208ENST00000585799 PRAMEF11O60813 436 aa12.46□□□□□ -0.41
SMARCA4-208ENST00000585799 SH3BGRLO75368 114 aa12.46□□□□□ -0.41
SMARCA4-208ENST00000585799 SYN1P17600 705 aa12.46□□□□□ -0.41
SMARCA4-208ENST00000585799 UGT1A6P19224 532 aa12.46□□□□□ -0.41
SMARCA4-208ENST00000585799 UGT1A1P22309 533 aa12.46□□□□□ -0.41
SMARCA4-208ENST00000585799 UGT1A4P22310 534 aa12.46□□□□□ -0.41
SMARCA4-208ENST00000585799 UGT1A3P35503 534 aa12.46□□□□□ -0.41
SMARCA4-208ENST00000585799 UGT1A5P35504 534 aa12.46□□□□□ -0.41
SMARCA4-208ENST00000585799 PTDSS1P48651 473 aaKnown RBP12.46□□□□□ -0.41
SMARCA4-208ENST00000585799 CBX2Q14781 532 aaPredicted RBP12.46□□□□□ -0.41
SMARCA4-208ENST00000585799 TSNQ15631 228 aaKnown RBP12.46□□□□□ -0.41
SMARCA4-208ENST00000585799 FAM26DQ5JW98 314 aa12.46□□□□□ -0.41
SMARCA4-208ENST00000585799 ANKS6Q68DC2 871 aa12.46□□□□□ -0.41
SMARCA4-208ENST00000585799 PAQR3Q6TCH7 311 aa12.46□□□□□ -0.41
SMARCA4-208ENST00000585799 BNC2Q6ZN30 1099 aaPredicted RBP12.46□□□□□ -0.41
SMARCA4-208ENST00000585799 CMTM8Q8IZV2 173 aa12.46□□□□□ -0.41
SMARCA4-208ENST00000585799 ICA1LQ8NDH6 482 aa12.46□□□□□ -0.41
SMARCA4-208ENST00000585799 PIP4K2CQ8TBX8 421 aa12.46□□□□□ -0.41
SMARCA4-208ENST00000585799 BRSK1Q8TDC3 778 aa12.46□□□□□ -0.41
SMARCA4-208ENST00000585799 DCUN1D1Q96GG9 259 aa12.46□□□□□ -0.41
SMARCA4-208ENST00000585799 ZNF333Q96JL9 665 aa12.46□□□□□ -0.41
SMARCA4-208ENST00000585799 OXSMQ9NWU1 459 aa12.46□□□□□ -0.41
SMARCA4-208ENST00000585799 BAIAP3O94812 1187 aa12.46□□□□□ -0.42
SMARCA4-208ENST00000585799 IPO13O94829 963 aaKnown RBP12.46□□□□□ -0.42
SMARCA4-208ENST00000585799 COL6A1P12109 1028 aa12.46□□□□□ -0.42
SMARCA4-208ENST00000585799 LAG3P18627 525 aa12.46□□□□□ -0.42
SMARCA4-208ENST00000585799 PBLDP30039 288 aaPredicted RBP12.46□□□□□ -0.42
SMARCA4-208ENST00000585799 RGRP47804 291 aa12.46□□□□□ -0.42
SMARCA4-208ENST00000585799 BOP1Q14137 746 aaKnown RBP12.46□□□□□ -0.42
SMARCA4-208ENST00000585799 TBCCQ15814 346 aa12.46□□□□□ -0.42
SMARCA4-208ENST00000585799 SLC39A5Q6ZMH5 540 aa12.46□□□□□ -0.42
SMARCA4-208ENST00000585799 SLC22A9Q8IVM8 553 aa12.46□□□□□ -0.42
SMARCA4-208ENST00000585799 ZNF366Q8N895 744 aa12.46□□□□□ -0.42
SMARCA4-208ENST00000585799 FAM156AQ8NDB6 213 aa12.46□□□□□ -0.42
SMARCA4-208ENST00000585799 LINGO1Q96FE5 620 aa12.46□□□□□ -0.42
SMARCA4-208ENST00000585799 ACOX2Q99424 681 aa12.46□□□□□ -0.42
SMARCA4-208ENST00000585799 KCNK13Q9HB14 408 aa12.46□□□□□ -0.42
SMARCA4-208ENST00000585799 POLR3BQ9NW08 1133 aaPredicted RBP12.46□□□□□ -0.42
SMARCA4-208ENST00000585799 GIMAP2Q9UG22 337 aa12.46□□□□□ -0.42
SMARCA4-208ENST00000585799 PHF24Q9UPV7 400 aa12.46□□□□□ -0.42
SMARCA4-208ENST00000585799 WASF2Q9Y6W5 498 aa12.46□□□□□ -0.42
SMARCA4-208ENST00000585799 TRAV19A0A0A6YYK7 116 aa12.45□□□□□ -0.42
SMARCA4-208ENST00000585799 PRR23AA6NEV1 266 aa12.45□□□□□ -0.42
SMARCA4-208ENST00000585799 LRRC14BA6NHZ5 514 aa12.45□□□□□ -0.42
SMARCA4-208ENST00000585799 GPR39O43194 453 aa12.45□□□□□ -0.42
SMARCA4-208ENST00000585799 SLC7A4O43246 635 aa12.45□□□□□ -0.42
SMARCA4-208ENST00000585799 CCNT2O60583 730 aaKnown RBP12.45□□□□□ -0.42
SMARCA4-208ENST00000585799 UGT2B4P06133 528 aa12.45□□□□□ -0.42
SMARCA4-208ENST00000585799 CLTBP09497 229 aa12.45□□□□□ -0.42
SMARCA4-208ENST00000585799 LINC00032P0C843 101 aa12.45□□□□□ -0.42
SMARCA4-208ENST00000585799 GABRB3P28472 473 aa12.45□□□□□ -0.42
SMARCA4-208ENST00000585799 VHLP40337 213 aa12.45□□□□□ -0.42
SMARCA4-208ENST00000585799 RGS4P49798 205 aa12.45□□□□□ -0.42
SMARCA4-208ENST00000585799 DDX39BQ13838 428 aaKnown RBP12.45□□□□□ -0.42
SMARCA4-208ENST00000585799 ACSBG2Q5FVE4 666 aa12.45□□□□□ -0.42
SMARCA4-208ENST00000585799 NADSYN1Q6IA69 706 aa12.45□□□□□ -0.42
SMARCA4-208ENST00000585799 TMEM199Q8N511 208 aa12.45□□□□□ -0.42
SMARCA4-208ENST00000585799 TXNDC5Q8NBS9 432 aaKnown RBP12.45□□□□□ -0.42
SMARCA4-208ENST00000585799 SLC22A12Q96S37 553 aa12.45□□□□□ -0.42
SMARCA4-208ENST00000585799 MIPEPQ99797 713 aa12.45□□□□□ -0.42
SMARCA4-208ENST00000585799 CLSTN3Q9BQT9 956 aa12.45□□□□□ -0.42
SMARCA4-208ENST00000585799 NOL6Q9H6R4 1146 aaKnown RBP12.45□□□□□ -0.42
SMARCA4-208ENST00000585799 TLE6Q9H808 572 aa12.45□□□□□ -0.42
SMARCA4-208ENST00000585799 DNAH12Q6ZR08 3092 aa12.45□□□□□ -0.42
SMARCA4-208ENST00000585799 LOC285556D6RIA3 1793 aa12.45□□□□□ -0.42
SMARCA4-208ENST00000585799 MUSKO15146 869 aa12.45□□□□□ -0.42
SMARCA4-208ENST00000585799 EEF1DP29692 281 aaKnown RBP12.45□□□□□ -0.42
SMARCA4-208ENST00000585799 KCTD11Q693B1 232 aa12.45□□□□□ -0.42
SMARCA4-208ENST00000585799 C16orf89Q6UX73 402 aa12.45□□□□□ -0.42
SMARCA4-208ENST00000585799 CPNE9Q8IYJ1 553 aa12.45□□□□□ -0.42
SMARCA4-208ENST00000585799 CDYL2Q8N8U2 506 aa12.45□□□□□ -0.42
SMARCA4-208ENST00000585799 GANCQ8TET4 914 aa12.45□□□□□ -0.42
SMARCA4-208ENST00000585799 SKA1Q96BD8 255 aa12.45□□□□□ -0.42
SMARCA4-208ENST00000585799 HGH1Q9BTY7 390 aa12.45□□□□□ -0.42
SMARCA4-208ENST00000585799 MOSPD1Q9UJG1 213 aa12.45□□□□□ -0.42
SMARCA4-208ENST00000585799 TRAF6Q9Y4K3 522 aa12.45□□□□□ -0.42
SMARCA4-208ENST00000585799 TMEM114B3SHH9 223 aa12.45□□□□□ -0.42
SMARCA4-208ENST00000585799 KLF11O14901 512 aa12.45□□□□□ -0.42
SMARCA4-208ENST00000585799 TEX28O15482 410 aa12.45□□□□□ -0.42
SMARCA4-208ENST00000585799 SOD2P04179 222 aa12.45□□□□□ -0.42
SMARCA4-208ENST00000585799 ATXN8OSP0DMR3 200 aa12.45□□□□□ -0.42
SMARCA4-208ENST00000585799 IL2P60568 153 aa12.45□□□□□ -0.42
SMARCA4-208ENST00000585799 FAM189BP81408 668 aa12.45□□□□□ -0.42
SMARCA4-208ENST00000585799 MRPS22P82650 360 aaKnown RBP12.45□□□□□ -0.42
SMARCA4-208ENST00000585799 HSPA14Q0VDF9 509 aa12.45□□□□□ -0.42
SMARCA4-208ENST00000585799 PTK2BQ14289 1009 aa12.45□□□□□ -0.42
SMARCA4-208ENST00000585799 AFTPHQ6ULP2 937 aa12.45□□□□□ -0.42
SMARCA4-208ENST00000585799 GPSM1Q86YR5 675 aa12.45□□□□□ -0.42
SMARCA4-208ENST00000585799 CLDN19Q8N6F1 224 aa12.45□□□□□ -0.42
SMARCA4-208ENST00000585799 SIDT2Q8NBJ9 832 aaKnown RBP12.45□□□□□ -0.42
SMARCA4-208ENST00000585799 KREMEN2Q8NCW0 462 aa12.45□□□□□ -0.42
SMARCA4-208ENST00000585799 MAPK15Q8TD08 544 aa12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms