RNA–Protein interactions for RNA: ENST00000585388.1

LSM12-202, Transcript of LSM12 homolog, humanhuman

TSL 3 BASIC

Gene LSM12, Length 942 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM12-202ENST00000585388 HLTFQ14527 1009 aaKnown RBP eCLIP16.4■□□□□ 0.22
LSM12-202ENST00000585388 CNGA3Q16281 694 aa16.4■□□□□ 0.22
LSM12-202ENST00000585388 BOLA3Q53S33 107 aa16.4■□□□□ 0.22
LSM12-202ENST00000585388 RALGPS1Q5JS13 557 aa16.4■□□□□ 0.22
LSM12-202ENST00000585388 SPECC1LQ69YQ0 1117 aa16.4■□□□□ 0.22
LSM12-202ENST00000585388 SPRED1Q7Z699 444 aa16.4■□□□□ 0.22
LSM12-202ENST00000585388 ATPAF2Q8N5M1 289 aa16.4■□□□□ 0.22
LSM12-202ENST00000585388 PDCD6IPQ8WUM4 868 aaKnown RBP16.4■□□□□ 0.22
LSM12-202ENST00000585388 CCNL2Q96S94 520 aaPredicted RBP16.4■□□□□ 0.22
LSM12-202ENST00000585388 LRIT1Q9P2V4 623 aa16.4■□□□□ 0.22
LSM12-202ENST00000585388 PSMD11O00231 422 aa16.39■□□□□ 0.21
LSM12-202ENST00000585388 HEXIM1O94992 359 aaKnown RBP16.39■□□□□ 0.21
LSM12-202ENST00000585388 CYP2A6P11509 494 aaPredicted RBP16.39■□□□□ 0.21
LSM12-202ENST00000585388 CR2P20023 1033 aa16.39■□□□□ 0.21
LSM12-202ENST00000585388 CDH6P55285 790 aa16.39■□□□□ 0.21
LSM12-202ENST00000585388 ILF3Q12906 894 aaKnown RBP eCLIP16.39■□□□□ 0.217e-7■■■□□ 16
LSM12-202ENST00000585388 SMTNL2Q2TAL5 461 aa16.39■□□□□ 0.21
LSM12-202ENST00000585388 TDRD12Q587J7 1177 aaKnown RBP16.39■□□□□ 0.21
LSM12-202ENST00000585388 POLNQ7Z5Q5 900 aa16.39■□□□□ 0.21
LSM12-202ENST00000585388 HEATR4Q86WZ0 1026 aa16.39■□□□□ 0.21
LSM12-202ENST00000585388 TP53INP2Q8IXH6 220 aa16.39■□□□□ 0.21
LSM12-202ENST00000585388 Q8N9G6 341 aaPredicted RBP16.39■□□□□ 0.21
LSM12-202ENST00000585388 HSPH1Q92598 858 aa16.39■□□□□ 0.21
LSM12-202ENST00000585388 DTD2Q96FN9 168 aa16.39■□□□□ 0.21
LSM12-202ENST00000585388 CSPG4P5Q96PW8 444 aa16.39■□□□□ 0.21
LSM12-202ENST00000585388 MGME1Q9BQP7 344 aa16.39■□□□□ 0.21
LSM12-202ENST00000585388 LGR4Q9BXB1 951 aa16.39■□□□□ 0.21
LSM12-202ENST00000585388 GSDMCQ9BYG8 508 aa16.39■□□□□ 0.21
LSM12-202ENST00000585388 ISCUQ9H1K1 167 aa16.39■□□□□ 0.21
LSM12-202ENST00000585388 CARS2Q9HA77 564 aaKnown RBP16.39■□□□□ 0.21
LSM12-202ENST00000585388 PHTF1Q9UMS5 762 aa16.39■□□□□ 0.21
LSM12-202ENST00000585388 LOXL2Q9Y4K0 774 aa16.39■□□□□ 0.21
LSM12-202ENST00000585388 PCDHGC4Q9Y5F7 938 aa16.39■□□□□ 0.21
LSM12-202ENST00000585388 RNF215Q9Y6U7 377 aa16.39■□□□□ 0.21
LSM12-202ENST00000585388 UNC13CQ8NB66 2214 aa16.38■□□□□ 0.21
LSM12-202ENST00000585388 COL6A6A6NMZ7 2263 aa16.38■□□□□ 0.21
LSM12-202ENST00000585388 ZNF462Q96JM2 2506 aa16.38■□□□□ 0.21
LSM12-202ENST00000585388 A0A1B0GTH6 734 aa16.38■□□□□ 0.21
LSM12-202ENST00000585388 NVLO15381 856 aaKnown RBP16.38■□□□□ 0.21
LSM12-202ENST00000585388 ZW10O43264 779 aa16.38■□□□□ 0.21
LSM12-202ENST00000585388 MAFKO60675 156 aa16.38■□□□□ 0.21
LSM12-202ENST00000585388 CCNB1P14635 433 aa16.38■□□□□ 0.21
LSM12-202ENST00000585388 IL1R2P27930 398 aa16.38■□□□□ 0.21
LSM12-202ENST00000585388 PEX6Q13608 980 aa16.38■□□□□ 0.21
LSM12-202ENST00000585388 PIGHQ14442 188 aaPredicted RBP16.38■□□□□ 0.21
LSM12-202ENST00000585388 MAP9Q49MG5 647 aa16.38■□□□□ 0.21
LSM12-202ENST00000585388 USP45Q70EL2 814 aa16.38■□□□□ 0.21
LSM12-202ENST00000585388 GPBAR1Q8TDU6 330 aa16.38■□□□□ 0.21
LSM12-202ENST00000585388 TEKT4Q8WW24 435 aa16.38■□□□□ 0.21
LSM12-202ENST00000585388 NSMCE3Q96MG7 304 aa16.38■□□□□ 0.21
LSM12-202ENST00000585388 CMKLR1Q99788 373 aa16.38■□□□□ 0.21
LSM12-202ENST00000585388 TEX101Q9BY14 249 aa16.38■□□□□ 0.21
LSM12-202ENST00000585388 ETNK2Q9NVF9 386 aa16.38■□□□□ 0.21
LSM12-202ENST00000585388 WDR70Q9NW82 654 aa16.38■□□□□ 0.21
LSM12-202ENST00000585388 TRNAU1APQ9NX07 287 aaKnown RBP16.38■□□□□ 0.21
LSM12-202ENST00000585388 TMEM63CQ9P1W3 806 aa16.38■□□□□ 0.21
LSM12-202ENST00000585388 PISDQ9UG56 409 aa16.38■□□□□ 0.21
LSM12-202ENST00000585388 ARHGEF17Q96PE2 2063 aaPredicted RBP16.38■□□□□ 0.21
LSM12-202ENST00000585388 PEX11BO96011 259 aa16.37■□□□□ 0.21
LSM12-202ENST00000585388 LIPCP11150 499 aa16.37■□□□□ 0.21
LSM12-202ENST00000585388 KRT10P13645 584 aa16.37■□□□□ 0.21
LSM12-202ENST00000585388 HGFP14210 728 aa16.37■□□□□ 0.21
LSM12-202ENST00000585388 AMPD1P23109 780 aa16.37■□□□□ 0.21
LSM12-202ENST00000585388 TEAD1P28347 426 aa16.37■□□□□ 0.21
LSM12-202ENST00000585388 MMP13P45452 471 aa16.37■□□□□ 0.21
LSM12-202ENST00000585388 ZNF165P49910 485 aa16.37■□□□□ 0.21
LSM12-202ENST00000585388 ZFP36L1Q07352 338 aaKnown RBP16.37■□□□□ 0.21
LSM12-202ENST00000585388 TRAF2Q12933 501 aa16.37■□□□□ 0.21
LSM12-202ENST00000585388 LY6DQ14210 128 aa16.37■□□□□ 0.21
LSM12-202ENST00000585388 FIGNQ5HY92 759 aa16.37■□□□□ 0.21
LSM12-202ENST00000585388 ARMC12Q5T9G4 340 aa16.37■□□□□ 0.21
LSM12-202ENST00000585388 MARC1Q5VT66 337 aa16.37■□□□□ 0.21
LSM12-202ENST00000585388 DENND2CQ68D51 928 aa16.37■□□□□ 0.21
LSM12-202ENST00000585388 RAET1GQ6H3X3 334 aa16.37■□□□□ 0.21
LSM12-202ENST00000585388 PELI3Q8N2H9 469 aa16.37■□□□□ 0.21
LSM12-202ENST00000585388 PGBD5Q8N414 524 aa16.37■□□□□ 0.21
LSM12-202ENST00000585388 NIPA2Q8N8Q9 360 aa16.37■□□□□ 0.21
LSM12-202ENST00000585388 CCL4L1Q8NHW4 92 aa16.37■□□□□ 0.21
LSM12-202ENST00000585388 MCCC1Q96RQ3 725 aaPredicted RBP16.37■□□□□ 0.21
LSM12-202ENST00000585388 FRMD8Q9BZ67 464 aaPredicted RBP16.37■□□□□ 0.21
LSM12-202ENST00000585388 NOD2Q9HC29 1040 aa16.37■□□□□ 0.21
LSM12-202ENST00000585388 AKAP7Q9P0M2 348 aaPredicted RBP16.37■□□□□ 0.21
LSM12-202ENST00000585388 TTC24A2A3L6 582 aaPredicted RBP16.36■□□□□ 0.21
LSM12-202ENST00000585388 GOLGA6CA6NDK9 693 aa16.36■□□□□ 0.21
LSM12-202ENST00000585388 GOLGA6BA6NDN3 693 aa16.36■□□□□ 0.21
LSM12-202ENST00000585388 NPIPB15A6NHN6 443 aaPredicted RBP16.36■□□□□ 0.21
LSM12-202ENST00000585388 PGLSO95336 258 aa16.36■□□□□ 0.21
LSM12-202ENST00000585388 CPNE6O95741 557 aa16.36■□□□□ 0.21
LSM12-202ENST00000585388 SERPINC1P01008 464 aa16.36■□□□□ 0.21
LSM12-202ENST00000585388 GOLGA6DP0CG33 693 aa16.36■□□□□ 0.21
LSM12-202ENST00000585388 RARAP10276 462 aa16.36■□□□□ 0.21
LSM12-202ENST00000585388 SKILP12757 684 aa16.36■□□□□ 0.21
LSM12-202ENST00000585388 TCF4P15884 667 aa16.36■□□□□ 0.21
LSM12-202ENST00000585388 LHCGRP22888 699 aa16.36■□□□□ 0.21
LSM12-202ENST00000585388 ETV3P41162 512 aa16.36■□□□□ 0.21
LSM12-202ENST00000585388 CDK3Q00526 305 aa16.36■□□□□ 0.21
LSM12-202ENST00000585388 BIRC2Q13490 618 aa16.36■□□□□ 0.21
LSM12-202ENST00000585388 CLPPQ16740 277 aaPredicted RBP16.36■□□□□ 0.21
LSM12-202ENST00000585388 PHF19Q5T6S3 580 aa16.36■□□□□ 0.21
LSM12-202ENST00000585388 KIAA1614Q5VZ46 1190 aa16.36■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 53.9 ms