RNA–Protein interactions for RNA: ENST00000584655.5

RFFL-212, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

TSL 2 BASIC

Gene RFFL, Length 4,039 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-212ENST00000584655 C2orf27AQ580R0 203 aa10.3□□□□□ -0.76
RFFL-212ENST00000584655 SLC39A11Q8N1S5 342 aa10.3□□□□□ -0.76
RFFL-212ENST00000584655 STMN2Q93045 179 aa10.3□□□□□ -0.76
RFFL-212ENST00000584655 NPAS2Q99743 824 aa10.3□□□□□ -0.76
RFFL-212ENST00000584655 MID1IP1Q9NPA3 183 aa10.3□□□□□ -0.76
RFFL-212ENST00000584655 GMPR2Q9P2T1 348 aaKnown RBP10.3□□□□□ -0.76
RFFL-212ENST00000584655 SOX13Q9UN79 622 aa10.3□□□□□ -0.76
RFFL-212ENST00000584655 VWA7Q9Y334 891 aa10.3□□□□□ -0.76
RFFL-212ENST00000584655 KNTC1P50748 2209 aa10.29□□□□□ -0.76
RFFL-212ENST00000584655 FFAR2O15552 330 aa10.29□□□□□ -0.76
RFFL-212ENST00000584655 DLX3O60479 287 aa10.29□□□□□ -0.76
RFFL-212ENST00000584655 IL1BP01584 269 aa10.29□□□□□ -0.76
RFFL-212ENST00000584655 PSMC3P17980 439 aa10.29□□□□□ -0.76
RFFL-212ENST00000584655 PAX7P23759 505 aa10.29□□□□□ -0.76
RFFL-212ENST00000584655 ARHGEF7Q14155 803 aa10.29□□□□□ -0.76
RFFL-212ENST00000584655 AP5B1Q2VPB7 878 aa10.29□□□□□ -0.76
RFFL-212ENST00000584655 TSTD2Q5T7W7 516 aa10.29□□□□□ -0.76
RFFL-212ENST00000584655 OR4L1Q8NH43 312 aa10.29□□□□□ -0.76
RFFL-212ENST00000584655 RIN3Q8TB24 985 aa10.29□□□□□ -0.76
RFFL-212ENST00000584655 MZB1Q8WU39 189 aa10.29□□□□□ -0.76
RFFL-212ENST00000584655 C10orf82Q8WW14 230 aa10.29□□□□□ -0.76
RFFL-212ENST00000584655 SMG7Q92540 1137 aaKnown RBP10.29□□□□□ -0.76
RFFL-212ENST00000584655 RXFP1Q9HBX9 757 aa10.29□□□□□ -0.76
RFFL-212ENST00000584655 CATSPERZQ9NTU4 200 aa10.29□□□□□ -0.76
RFFL-212ENST00000584655 RNF112Q9ULX5 631 aa10.29□□□□□ -0.76
RFFL-212ENST00000584655 PKP3Q9Y446 797 aa10.29□□□□□ -0.76
RFFL-212ENST00000584655 HEATR9A2RTY3 570 aa10.29□□□□□ -0.76
RFFL-212ENST00000584655 TBC1D3BA6NDS4 549 aa10.29□□□□□ -0.76
RFFL-212ENST00000584655 MAP3K7O43318 606 aa10.29□□□□□ -0.76
RFFL-212ENST00000584655 TRIM13O60858 407 aa10.29□□□□□ -0.76
RFFL-212ENST00000584655 SPAG6O75602 509 aa10.29□□□□□ -0.76
RFFL-212ENST00000584655 KRT36O76013 467 aa10.29□□□□□ -0.76
RFFL-212ENST00000584655 CYBBP04839 570 aa10.29□□□□□ -0.76
RFFL-212ENST00000584655 RHOP08100 348 aa10.29□□□□□ -0.76
RFFL-212ENST00000584655 HSPA8P11142 646 aaKnown RBP10.29□□□□□ -0.76
RFFL-212ENST00000584655 SERPINB9P50453 376 aa10.29□□□□□ -0.76
RFFL-212ENST00000584655 GSCP56915 257 aaPredicted RBP10.29□□□□□ -0.76
RFFL-212ENST00000584655 RAB10P61026 200 aa10.29□□□□□ -0.76
RFFL-212ENST00000584655 ELF3P78545 371 aaPredicted RBP10.29□□□□□ -0.76
RFFL-212ENST00000584655 LMAN2Q12907 356 aa10.29□□□□□ -0.76
RFFL-212ENST00000584655 RD3Q7Z3Z2 195 aa10.29□□□□□ -0.76
RFFL-212ENST00000584655 CDYL2Q8N8U2 506 aa10.29□□□□□ -0.76
RFFL-212ENST00000584655 MDGA1Q8NFP4 955 aa10.29□□□□□ -0.76
RFFL-212ENST00000584655 SPATA17Q96L03 361 aa10.29□□□□□ -0.76
RFFL-212ENST00000584655 FEM1AQ9BSK4 669 aa10.29□□□□□ -0.76
RFFL-212ENST00000584655 TNFRSF12AQ9NP84 129 aa10.29□□□□□ -0.76
RFFL-212ENST00000584655 TBX21Q9UL17 535 aa10.29□□□□□ -0.76
RFFL-212ENST00000584655 CACNA1IQ9P0X4 2223 aa10.29□□□□□ -0.76
RFFL-212ENST00000584655 C2orf81A6NN90 581 aa10.29□□□□□ -0.76
RFFL-212ENST00000584655 LEFTY2O00292 366 aa10.29□□□□□ -0.76
RFFL-212ENST00000584655 GIPC1O14908 333 aa10.29□□□□□ -0.76
RFFL-212ENST00000584655 ADH1AP07327 375 aa10.29□□□□□ -0.76
RFFL-212ENST00000584655 SLC35E2BP0CK96 405 aa10.29□□□□□ -0.76
RFFL-212ENST00000584655 CASP9P55211 416 aa10.29□□□□□ -0.76
RFFL-212ENST00000584655 BCL2L1Q07817 233 aa10.29□□□□□ -0.76
RFFL-212ENST00000584655 CCDC15Q0P6D6 951 aa10.29□□□□□ -0.76
RFFL-212ENST00000584655 PDPK2PQ6A1A2 396 aa10.29□□□□□ -0.76
RFFL-212ENST00000584655 RGS9BPQ6ZS82 235 aa10.29□□□□□ -0.76
RFFL-212ENST00000584655 LIMS2Q7Z4I7 341 aa10.29□□□□□ -0.76
RFFL-212ENST00000584655 ADGRD2Q7Z7M1 963 aa10.29□□□□□ -0.76
RFFL-212ENST00000584655 SNX32Q86XE0 403 aa10.29□□□□□ -0.76
RFFL-212ENST00000584655 SPATS2Q86XZ4 545 aaKnown RBP10.29□□□□□ -0.76
RFFL-212ENST00000584655 SLC22A15Q8IZD6 547 aa10.29□□□□□ -0.76
RFFL-212ENST00000584655 DEFB107AQ8IZN7 70 aa10.29□□□□□ -0.76
RFFL-212ENST00000584655 DNAJC5GQ8N7S2 189 aa10.29□□□□□ -0.76
RFFL-212ENST00000584655 TXNDC5Q8NBS9 432 aaKnown RBP10.29□□□□□ -0.76
RFFL-212ENST00000584655 PBXIP1Q96AQ6 731 aa10.29□□□□□ -0.76
RFFL-212ENST00000584655 SLC39A13Q96H72 371 aa10.29□□□□□ -0.76
RFFL-212ENST00000584655 ATG10Q9H0Y0 220 aa10.29□□□□□ -0.76
RFFL-212ENST00000584655 WDR70Q9NW82 654 aa10.29□□□□□ -0.76
RFFL-212ENST00000584655 EURLQ9NYK6 297 aa10.29□□□□□ -0.76
RFFL-212ENST00000584655 RCOR3Q9P2K3 495 aaPredicted RBP10.29□□□□□ -0.76
RFFL-212ENST00000584655 OGDHLQ9ULD0 1010 aa10.29□□□□□ -0.76
RFFL-212ENST00000584655 SSX2IPQ9Y2D8 614 aa10.29□□□□□ -0.76
RFFL-212ENST00000584655 HBS1LQ9Y450 684 aaKnown RBP10.29□□□□□ -0.76
RFFL-212ENST00000584655 ANGPTL3Q9Y5C1 460 aa10.29□□□□□ -0.76
RFFL-212ENST00000584655 TM9SF1O15321 606 aa10.28□□□□□ -0.76
RFFL-212ENST00000584655 HOXD9P28356 352 aaPredicted RBP10.28□□□□□ -0.76
RFFL-212ENST00000584655 PRDX3P30048 256 aaKnown RBP10.28□□□□□ -0.76
RFFL-212ENST00000584655 NPY2RP49146 381 aa10.28□□□□□ -0.76
RFFL-212ENST00000584655 RASSF2P50749 326 aa10.28□□□□□ -0.76
RFFL-212ENST00000584655 NEK3P51956 506 aa10.28□□□□□ -0.76
RFFL-212ENST00000584655 ARF5P84085 180 aa10.28□□□□□ -0.76
RFFL-212ENST00000584655 GRTP1Q5TC63 336 aa10.28□□□□□ -0.76
RFFL-212ENST00000584655 PIWIL2Q8TC59 973 aaKnown RBP10.28□□□□□ -0.76
RFFL-212ENST00000584655 KCNN1Q92952 543 aa10.28□□□□□ -0.76
RFFL-212ENST00000584655 TUBGCP3Q96CW5 907 aa10.28□□□□□ -0.76
RFFL-212ENST00000584655 CDKN2AIPNLQ96HQ2 116 aa10.28□□□□□ -0.76
RFFL-212ENST00000584655 KLHL32Q96NJ5 620 aa10.28□□□□□ -0.76
RFFL-212ENST00000584655 FCRL5Q96RD9 977 aa10.28□□□□□ -0.76
RFFL-212ENST00000584655 NRTNQ99748 197 aa10.28□□□□□ -0.76
RFFL-212ENST00000584655 TRIM62Q9BVG3 475 aa10.28□□□□□ -0.76
RFFL-212ENST00000584655 YIPF3Q9GZM5 350 aa10.28□□□□□ -0.76
RFFL-212ENST00000584655 A0A0G2JMZ2 1700 aa10.28□□□□□ -0.76
RFFL-212ENST00000584655 A0A1B0GTL3 188 aa10.28□□□□□ -0.76
RFFL-212ENST00000584655 A0A1B0GVM2 712 aa10.28□□□□□ -0.76
RFFL-212ENST00000584655 TCAF2A6NFQ2 919 aa10.28□□□□□ -0.76
RFFL-212ENST00000584655 TTC34A8MYJ7 566 aa10.28□□□□□ -0.76
RFFL-212ENST00000584655 PRPF4O43172 522 aaKnown RBP eCLIP10.28□□□□□ -0.76
RFFL-212ENST00000584655 SNX2O60749 519 aa10.28□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms