RNA–Protein interactions for RNA: ENST00000582453.5

MSI2-215, Transcript of musashi RNA binding protein 2, human

TSL 3

Gene MSI2, Length 496 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MSI2-215	ENST00000582453	KLB	Q86Z14	1044 aa		3.37	□□□□□ -1.87
MSI2-215	ENST00000582453	C9orf106	Q8NAJ2	232 aa		3.37	□□□□□ -1.87
MSI2-215	ENST00000582453	MIGA1	Q8NAN2	632 aa		3.37	□□□□□ -1.87
MSI2-215	ENST00000582453	NSMCE1	Q8WV22	266 aa		3.37	□□□□□ -1.87
MSI2-215	ENST00000582453	GOLGA1	Q92805	767 aa		3.37	□□□□□ -1.87
MSI2-215	ENST00000582453	SLC25A28	Q96A46	364 aa		3.37	□□□□□ -1.87
MSI2-215	ENST00000582453	EME1	Q96AY2	570 aa		3.37	□□□□□ -1.87
MSI2-215	ENST00000582453	HVCN1	Q96D96	273 aa		3.37	□□□□□ -1.87
MSI2-215	ENST00000582453	C7orf26	Q96N11	449 aa		3.37	□□□□□ -1.87
MSI2-215	ENST00000582453	PIGS	Q96S52	555 aa		3.37	□□□□□ -1.87
MSI2-215	ENST00000582453	HERC2P3	Q9BVR0	1158 aa		3.37	□□□□□ -1.87
MSI2-215	ENST00000582453	PHF7	Q9BWX1	381 aa	Predicted RBP	3.37	□□□□□ -1.87
MSI2-215	ENST00000582453	TMEM39B	Q9GZU3	492 aa		3.37	□□□□□ -1.87
MSI2-215	ENST00000582453	PAIP1	Q9H074	479 aa	Known RBP	3.37	□□□□□ -1.87
MSI2-215	ENST00000582453	RNF41	Q9H4P4	317 aa	Predicted RBP	3.37	□□□□□ -1.87
MSI2-215	ENST00000582453	TASP1	Q9H6P5	420 aa		3.37	□□□□□ -1.87
MSI2-215	ENST00000582453	AAMDC	Q9H7C9	122 aa		3.37	□□□□□ -1.87
MSI2-215	ENST00000582453	DNAJC18	Q9H819	358 aa		3.37	□□□□□ -1.87
MSI2-215	ENST00000582453	IL21R	Q9HBE5	538 aa		3.37	□□□□□ -1.87
MSI2-215	ENST00000582453	NOD2	Q9HC29	1040 aa		3.37	□□□□□ -1.87
MSI2-215	ENST00000582453	PREB	Q9HCU5	417 aa		3.37	□□□□□ -1.87
MSI2-215	ENST00000582453	ZCCHC17	Q9NP64	241 aa	Known RBP	3.37	□□□□□ -1.87
MSI2-215	ENST00000582453	SPAG4	Q9NPE6	437 aa		3.37	□□□□□ -1.87
MSI2-215	ENST00000582453	FZD3	Q9NPG1	666 aa		3.37	□□□□□ -1.87
MSI2-215	ENST00000582453	TBC1D22B	Q9NU19	505 aa		3.37	□□□□□ -1.87
MSI2-215	ENST00000582453	MCM9	Q9NXL9	1143 aa		3.37	□□□□□ -1.87
MSI2-215	ENST00000582453	FBXO2	Q9UK22	296 aa	Predicted RBP	3.37	□□□□□ -1.87
MSI2-215	ENST00000582453	DDX52	Q9Y2R4	599 aa	Known RBP eCLIP	3.37	□□□□□ -1.87
MSI2-215	ENST00000582453	SQOR	Q9Y6N5	450 aa		3.37	□□□□□ -1.87
MSI2-215	ENST00000582453	SLC4A4	Q9Y6R1	1079 aa		3.37	□□□□□ -1.87
MSI2-215	ENST00000582453	DOCK2	Q92608	1830 aa		3.37	□□□□□ -1.87
MSI2-215	ENST00000582453	CHD4	Q14839	1912 aa		3.36	□□□□□ -1.87
MSI2-215	ENST00000582453	PAPPA2	Q9BXP8	1791 aa		3.36	□□□□□ -1.87
MSI2-215	ENST00000582453	IGKV6D-41	A0A0C4DH26	115 aa		3.36	□□□□□ -1.87
MSI2-215	ENST00000582453	TMEM272	A0A1B0GTI8	110 aa		3.36	□□□□□ -1.87
MSI2-215	ENST00000582453		A0A1W2PPC1	479 aa		3.36	□□□□□ -1.87
MSI2-215	ENST00000582453	CXorf65	A6NEN9	183 aa		3.36	□□□□□ -1.87
MSI2-215	ENST00000582453	CD8B2	A6NJW9	211 aa		3.36	□□□□□ -1.87
MSI2-215	ENST00000582453		B4DGG1	531 aa		3.36	□□□□□ -1.87
MSI2-215	ENST00000582453	CXCL11	O14625	94 aa		3.36	□□□□□ -1.87
MSI2-215	ENST00000582453	KCNAB3	O43448	404 aa		3.36	□□□□□ -1.87
MSI2-215	ENST00000582453	PRKAB2	O43741	272 aa		3.36	□□□□□ -1.87
MSI2-215	ENST00000582453	TSPAN3	O60637	253 aa		3.36	□□□□□ -1.87
MSI2-215	ENST00000582453	NEURL1	O76050	574 aa		3.36	□□□□□ -1.87
MSI2-215	ENST00000582453	REC8	O95072	547 aa		3.36	□□□□□ -1.87
MSI2-215	ENST00000582453	NTN1	O95631	604 aa		3.36	□□□□□ -1.87
MSI2-215	ENST00000582453	CRYAB	P02511	175 aa	Known RBP	3.36	□□□□□ -1.87
MSI2-215	ENST00000582453	ASNS	P08243	561 aa		3.36	□□□□□ -1.87
MSI2-215	ENST00000582453	HOXB9	P17482	250 aa	Predicted RBP	3.36	□□□□□ -1.87
MSI2-215	ENST00000582453	PRPH2	P23942	346 aa		3.36	□□□□□ -1.87
MSI2-215	ENST00000582453	SHMT1	P34896	483 aa		3.36	□□□□□ -1.87
MSI2-215	ENST00000582453	MAP2K2	P36507	400 aa		3.36	□□□□□ -1.87
MSI2-215	ENST00000582453	TDO2	P48775	406 aa		3.36	□□□□□ -1.87
MSI2-215	ENST00000582453	OAZ1	P54368	228 aa		3.36	□□□□□ -1.87
MSI2-215	ENST00000582453	FOXG1	P55316	489 aa	Predicted RBP	3.36	□□□□□ -1.87
MSI2-215	ENST00000582453	HUNK	P57058	714 aa		3.36	□□□□□ -1.87
MSI2-215	ENST00000582453	PPAT	Q06203	517 aa		3.36	□□□□□ -1.87
MSI2-215	ENST00000582453	PPIL2	Q13356	520 aa		3.36	□□□□□ -1.87
MSI2-215	ENST00000582453	PDCL	Q13371	301 aa		3.36	□□□□□ -1.87
MSI2-215	ENST00000582453	VGLL4	Q14135	290 aa		3.36	□□□□□ -1.87
MSI2-215	ENST00000582453	BAK1	Q16611	211 aa		3.36	□□□□□ -1.87
MSI2-215	ENST00000582453	IMMT	Q16891	758 aa	Known RBP	3.36	□□□□□ -1.87
MSI2-215	ENST00000582453	ALG10	Q5BKT4	473 aa		3.36	□□□□□ -1.87
MSI2-215	ENST00000582453	ALG10B	Q5I7T1	473 aa		3.36	□□□□□ -1.87
MSI2-215	ENST00000582453	WDR45B	Q5MNZ6	344 aa		3.36	□□□□□ -1.87
MSI2-215	ENST00000582453	VWA5B1	Q5TIE3	1220 aa		3.36	□□□□□ -1.87
MSI2-215	ENST00000582453	RGMB	Q6NW40	437 aa		3.36	□□□□□ -1.87
MSI2-215	ENST00000582453	CTR9	Q6PD62	1173 aa		3.36	□□□□□ -1.87
MSI2-215	ENST00000582453	CWC27	Q6UX04	472 aa	Known RBP	3.36	□□□□□ -1.87
MSI2-215	ENST00000582453	TMEM179	Q6ZVK1	233 aa		3.36	□□□□□ -1.87
MSI2-215	ENST00000582453	TMEM200A	Q86VY9	491 aa		3.36	□□□□□ -1.87
MSI2-215	ENST00000582453	ERO1B	Q86YB8	467 aa		3.36	□□□□□ -1.87
MSI2-215	ENST00000582453	SCYL3	Q8IZE3	742 aa		3.36	□□□□□ -1.87
MSI2-215	ENST00000582453	FBXL16	Q8N461	479 aa		3.36	□□□□□ -1.87
MSI2-215	ENST00000582453	PTGR2	Q8N8N7	351 aa	Predicted RBP	3.36	□□□□□ -1.87
MSI2-215	ENST00000582453	LSM14A	Q8ND56	463 aa	Known RBP	3.36	□□□□□ -1.87
MSI2-215	ENST00000582453	SDR42E1	Q8WUS8	393 aa		3.36	□□□□□ -1.87
MSI2-215	ENST00000582453	KAT2A	Q92830	837 aa		3.36	□□□□□ -1.87
MSI2-215	ENST00000582453	ZUFSP	Q96AP4	578 aa		3.36	□□□□□ -1.87
MSI2-215	ENST00000582453	C12orf42	Q96LP6	360 aa		3.36	□□□□□ -1.87
MSI2-215	ENST00000582453	CHCHD6	Q9BRQ6	235 aa		3.36	□□□□□ -1.87
MSI2-215	ENST00000582453	LSG1	Q9H089	658 aa	Known RBP	3.36	□□□□□ -1.87
MSI2-215	ENST00000582453	FAM234A	Q9H0X4	552 aa		3.36	□□□□□ -1.87
MSI2-215	ENST00000582453	NAPB	Q9H115	298 aa		3.36	□□□□□ -1.87
MSI2-215	ENST00000582453	SH2D4A	Q9H788	454 aa		3.36	□□□□□ -1.87
MSI2-215	ENST00000582453	PLEKHA2	Q9HB19	425 aa		3.36	□□□□□ -1.87
MSI2-215	ENST00000582453	TCP11L1	Q9NUJ3	509 aa		3.36	□□□□□ -1.87
MSI2-215	ENST00000582453	TBX20	Q9UMR3	447 aa		3.36	□□□□□ -1.87
MSI2-215	ENST00000582453	SLC45A1	Q9Y2W3	748 aa		3.36	□□□□□ -1.87
MSI2-215	ENST00000582453	PKP3	Q9Y446	797 aa		3.36	□□□□□ -1.87
MSI2-215	ENST00000582453	WDR19	Q8NEZ3	1342 aa		3.36	□□□□□ -1.87
MSI2-215	ENST00000582453	AKAP11	Q9UKA4	1901 aa		3.36	□□□□□ -1.87
MSI2-215	ENST00000582453	DDX60L	Q5H9U9	1706 aa	Known RBP	3.36	□□□□□ -1.87
MSI2-215	ENST00000582453	THSD7B	Q9C0I4	1608 aa		3.35	□□□□□ -1.87
MSI2-215	ENST00000582453		A6NCN8	305 aa		3.35	□□□□□ -1.87
MSI2-215	ENST00000582453	PGPEP1L	A6NFU8	196 aa		3.35	□□□□□ -1.87
MSI2-215	ENST00000582453		A6NNC1	897 aa		3.35	□□□□□ -1.87
MSI2-215	ENST00000582453	C19orf81	C9J6K1	198 aa		3.35	□□□□□ -1.87
MSI2-215	ENST00000582453	INSIG1	O15503	277 aa		3.35	□□□□□ -1.87
MSI2-215	ENST00000582453	USO1	O60763	962 aa	Known RBP	3.35	□□□□□ -1.87

Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms