RNA–Protein interactions for RNA: ENST00000581226.1

SMCHD1-204, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 3

Gene SMCHD1, Length 459 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-204ENST00000581226 CRELD2Q6UXH1 353 aaPredicted RBP4.6□□□□□ -1.67
SMCHD1-204ENST00000581226 DSTYKQ6XUX3 929 aa4.6□□□□□ -1.67
SMCHD1-204ENST00000581226 TMTC3Q6ZXV5 915 aa4.6□□□□□ -1.67
SMCHD1-204ENST00000581226 RSRC2Q7L4I2 434 aaKnown RBP4.6□□□□□ -1.67
SMCHD1-204ENST00000581226 TAOK1Q7L7X3 1001 aa4.6□□□□□ -1.67
SMCHD1-204ENST00000581226 MAATS1Q7Z4T9 603 aa4.6□□□□□ -1.67
SMCHD1-204ENST00000581226 SPATA6LQ8N4H0 392 aa4.6□□□□□ -1.67
SMCHD1-204ENST00000581226 ZNF114Q8NC26 417 aa4.6□□□□□ -1.67
SMCHD1-204ENST00000581226 RND1Q92730 232 aa4.6□□□□□ -1.67
SMCHD1-204ENST00000581226 HDAC2Q92769 488 aaKnown RBP4.6□□□□□ -1.67
SMCHD1-204ENST00000581226 FAM149B1Q96BN6 582 aa4.6□□□□□ -1.67
SMCHD1-204ENST00000581226 SCMH1Q96GD3 660 aa4.6□□□□□ -1.67
SMCHD1-204ENST00000581226 METTL2AQ96IZ6 378 aaKnown RBP4.6□□□□□ -1.67
SMCHD1-204ENST00000581226 SLC41A2Q96JW4 573 aa4.6□□□□□ -1.67
SMCHD1-204ENST00000581226 OR1F2PQ96R84 312 aa4.6□□□□□ -1.67
SMCHD1-204ENST00000581226 HAUS8Q9BT25 410 aa4.6□□□□□ -1.67
SMCHD1-204ENST00000581226 IFIH1Q9BYX4 1025 aaKnown RBP4.6□□□□□ -1.67
SMCHD1-204ENST00000581226 NOX4Q9NPH5 578 aa4.6□□□□□ -1.67
SMCHD1-204ENST00000581226 ZNF580Q9UK33 172 aa4.6□□□□□ -1.67
SMCHD1-204ENST00000581226 FAM237AA0A1B0GTK4 181 aa4.59□□□□□ -1.67
SMCHD1-204ENST00000581226 AKR1B15C9JRZ8 316 aaPredicted RBP4.59□□□□□ -1.67
SMCHD1-204ENST00000581226 SOCS6O14544 535 aa4.59□□□□□ -1.67
SMCHD1-204ENST00000581226 ACOT8O14734 319 aa4.59□□□□□ -1.67
SMCHD1-204ENST00000581226 FGF3P11487 239 aaPredicted RBP4.59□□□□□ -1.67
SMCHD1-204ENST00000581226 IL7RP16871 459 aa4.59□□□□□ -1.67
SMCHD1-204ENST00000581226 ZNF182P17025 639 aaPredicted RBP4.59□□□□□ -1.67
SMCHD1-204ENST00000581226 DDX5P17844 614 aaKnown RBP4.59□□□□□ -1.67
SMCHD1-204ENST00000581226 CD53P19397 219 aa4.59□□□□□ -1.67
SMCHD1-204ENST00000581226 MAOAP21397 527 aa4.59□□□□□ -1.67
SMCHD1-204ENST00000581226 MAN1A1P33908 653 aa4.59□□□□□ -1.67
SMCHD1-204ENST00000581226 PBX3P40426 434 aa4.59□□□□□ -1.67
SMCHD1-204ENST00000581226 RAD23BP54727 409 aa4.59□□□□□ -1.67
SMCHD1-204ENST00000581226 SF3B4Q15427 424 aaKnown RBP eCLIP4.59□□□□□ -1.67
SMCHD1-204ENST00000581226 CALCRLQ16602 461 aa4.59□□□□□ -1.67
SMCHD1-204ENST00000581226 IZUMO4Q1ZYL8 232 aa4.59□□□□□ -1.67
SMCHD1-204ENST00000581226 EIF2S3LQ2VIR3 472 aaKnown RBP4.59□□□□□ -1.67
SMCHD1-204ENST00000581226 GGNBP1Q5YKI7 109 aa4.59□□□□□ -1.67
SMCHD1-204ENST00000581226 HAUS3Q68CZ6 603 aa4.59□□□□□ -1.67
SMCHD1-204ENST00000581226 CAPRIN2Q6IMN6 1127 aaKnown RBP4.59□□□□□ -1.67
SMCHD1-204ENST00000581226 PLEKHA7Q6IQ23 1121 aa4.59□□□□□ -1.67
SMCHD1-204ENST00000581226 SLC36A4Q6YBV0 504 aa4.59□□□□□ -1.67
SMCHD1-204ENST00000581226 RBM23Q86U06 439 aaKnown RBP4.59□□□□□ -1.67
SMCHD1-204ENST00000581226 CCDC13Q8IYE1 715 aa4.59□□□□□ -1.67
SMCHD1-204ENST00000581226 TMEM116Q8NCL8 245 aa4.59□□□□□ -1.67
SMCHD1-204ENST00000581226 NEK9Q8TD19 979 aa4.59□□□□□ -1.67
SMCHD1-204ENST00000581226 MMABQ96EY8 250 aaPredicted RBP4.59□□□□□ -1.67
SMCHD1-204ENST00000581226 MAP7D2Q96T17 732 aa4.59□□□□□ -1.67
SMCHD1-204ENST00000581226 STRA6Q9BX79 667 aa4.59□□□□□ -1.67
SMCHD1-204ENST00000581226 KCNN2Q9H2S1 579 aa4.59□□□□□ -1.67
SMCHD1-204ENST00000581226 SLCO5A1Q9H2Y9 848 aa4.59□□□□□ -1.67
SMCHD1-204ENST00000581226 C17orf75Q9HAS0 396 aa4.59□□□□□ -1.67
SMCHD1-204ENST00000581226 SCPEP1Q9HB40 452 aa4.59□□□□□ -1.67
SMCHD1-204ENST00000581226 FBRSL1Q9HCM7 1045 aaKnown RBP4.59□□□□□ -1.67
SMCHD1-204ENST00000581226 DLGAP2Q9P1A6 1054 aa4.59□□□□□ -1.67
SMCHD1-204ENST00000581226 LIMA1Q9UHB6 759 aaKnown RBP4.59□□□□□ -1.67
SMCHD1-204ENST00000581226 TTC7AQ9ULT0 858 aaPredicted RBP4.59□□□□□ -1.67
SMCHD1-204ENST00000581226 SRRM3A6NNA2 597 aaPredicted RBP4.58□□□□□ -1.68
SMCHD1-204ENST00000581226 BTBD18B2RXH4 712 aa4.58□□□□□ -1.68
SMCHD1-204ENST00000581226 PLRG1O43660 514 aaKnown RBP4.58□□□□□ -1.68
SMCHD1-204ENST00000581226 PAGE4O60829 102 aa4.58□□□□□ -1.68
SMCHD1-204ENST00000581226 CCNDBP1O95273 360 aa4.58□□□□□ -1.68
SMCHD1-204ENST00000581226 SRCP12931 536 aa4.58□□□□□ -1.68
SMCHD1-204ENST00000581226 DAOP14920 347 aa4.58□□□□□ -1.68
SMCHD1-204ENST00000581226 CCKBRP32239 447 aa4.58□□□□□ -1.68
SMCHD1-204ENST00000581226 ECT2LQ008S8 904 aa4.58□□□□□ -1.68
SMCHD1-204ENST00000581226 GOLGA8DPQ0D2H9 430 aa4.58□□□□□ -1.68
SMCHD1-204ENST00000581226 DLG1Q12959 904 aa4.58□□□□□ -1.68
SMCHD1-204ENST00000581226 KRT32Q14532 448 aa4.58□□□□□ -1.68
SMCHD1-204ENST00000581226 KIF19Q2TAC6 998 aa4.58□□□□□ -1.68
SMCHD1-204ENST00000581226 ATP13A5Q4VNC0 1218 aa4.58□□□□□ -1.68
SMCHD1-204ENST00000581226 PAPPA-AS1Q5QFB9 102 aa4.58□□□□□ -1.68
SMCHD1-204ENST00000581226 WDR73Q6P4I2 378 aa4.58□□□□□ -1.68
SMCHD1-204ENST00000581226 PRSS57Q6UWY2 283 aa4.58□□□□□ -1.68
SMCHD1-204ENST00000581226 C16orf82Q7Z2V1 217 aa4.58□□□□□ -1.68
SMCHD1-204ENST00000581226 ARMC9Q7Z3E5 817 aa4.58□□□□□ -1.68
SMCHD1-204ENST00000581226 LMO3Q8TAP4 145 aa4.58□□□□□ -1.68
SMCHD1-204ENST00000581226 PERPQ96FX8 193 aa4.58□□□□□ -1.68
SMCHD1-204ENST00000581226 ADGRG7Q96K78 797 aa4.58□□□□□ -1.68
SMCHD1-204ENST00000581226 C3orf30Q96M34 536 aa4.58□□□□□ -1.68
SMCHD1-204ENST00000581226 TMEM68Q96MH6 324 aa4.58□□□□□ -1.68
SMCHD1-204ENST00000581226 SH3GL2Q99962 352 aa4.58□□□□□ -1.68
SMCHD1-204ENST00000581226 TMEM47Q9BQJ4 181 aa4.58□□□□□ -1.68
SMCHD1-204ENST00000581226 C1QTNF5Q9BXJ0 243 aa4.58□□□□□ -1.68
SMCHD1-204ENST00000581226 ZHX3Q9H4I2 956 aa4.58□□□□□ -1.68
SMCHD1-204ENST00000581226 PPP1R3EQ9H7J1 279 aa4.58□□□□□ -1.68
SMCHD1-204ENST00000581226 ABI3Q9P2A4 366 aa4.58□□□□□ -1.68
SMCHD1-204ENST00000581226 MALT1Q9UDY8 824 aa4.58□□□□□ -1.68
SMCHD1-204ENST00000581226 PCDHGB1Q9Y5G3 927 aa4.58□□□□□ -1.68
SMCHD1-204ENST00000581226 PSAT1Q9Y617 370 aa4.58□□□□□ -1.68
SMCHD1-204ENST00000581226 KCNE2Q9Y6J6 123 aa4.58□□□□□ -1.68
SMCHD1-204ENST00000581226 PIAS3Q9Y6X2 628 aa4.58□□□□□ -1.68
SMCHD1-204ENST00000581226 EVPLQ92817 2033 aa4.58□□□□□ -1.68
SMCHD1-204ENST00000581226 TDRD9Q8NDG6 1382 aaKnown RBP4.57□□□□□ -1.68
SMCHD1-204ENST00000581226 FAM237BA0A1B0GVD1 139 aa4.57□□□□□ -1.68
SMCHD1-204ENST00000581226 A0A1W2PRG0 241 aa4.57□□□□□ -1.68
SMCHD1-204ENST00000581226 WDHD1O75717 1129 aaPredicted RBP4.57□□□□□ -1.68
SMCHD1-204ENST00000581226 KDM4BO94953 1096 aa4.57□□□□□ -1.68
SMCHD1-204ENST00000581226 NKX2-2O95096 273 aa4.57□□□□□ -1.68
SMCHD1-204ENST00000581226 CLDN14O95500 239 aa4.57□□□□□ -1.68
SMCHD1-204ENST00000581226 PPP1R3DO95685 299 aa4.57□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms