RNA–Protein interactions for RNA: ENST00000580019.1

KPNB1-208, Transcript of karyopherin subunit beta 1, humanhuman

TSL 2

Gene KPNB1, Length 427 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KPNB1-208ENST00000580019 HAO1Q9UJM8 370 aa3.21□□□□□ -1.9
KPNB1-208ENST00000580019 FBXL5Q9UKA1 691 aa3.21□□□□□ -1.9
KPNB1-208ENST00000580019 NDRG4Q9ULP0 352 aaKnown RBP3.21□□□□□ -1.9
KPNB1-208ENST00000580019 CHKBQ9Y259 395 aa3.21□□□□□ -1.9
KPNB1-208ENST00000580019 ANGPTL3Q9Y5C1 460 aa3.21□□□□□ -1.9
KPNB1-208ENST00000580019 CARMIL1Q5VZK9 1371 aa3.21□□□□□ -1.9
KPNB1-208ENST00000580019 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP3.21□□□□□ -1.9
KPNB1-208ENST00000580019 NOTCH4Q99466 2003 aa3.2□□□□□ -1.9
KPNB1-208ENST00000580019 NPHP4O75161 1426 aaPredicted RBP3.2□□□□□ -1.9
KPNB1-208ENST00000580019 DNMT1P26358 1616 aaKnown RBP3.2□□□□□ -1.9
KPNB1-208ENST00000580019 PHLPP1O60346 1717 aa3.2□□□□□ -1.9
KPNB1-208ENST00000580019 SYCE3A1L190 88 aa3.2□□□□□ -1.9
KPNB1-208ENST00000580019 RGSL1A5PLK6 1076 aa3.2□□□□□ -1.9
KPNB1-208ENST00000580019 LRRC72A6NJI9 287 aa3.2□□□□□ -1.9
KPNB1-208ENST00000580019 C3orf70A6NLC5 250 aaPredicted RBP3.2□□□□□ -1.9
KPNB1-208ENST00000580019 ADM5C9JUS6 153 aa3.2□□□□□ -1.9
KPNB1-208ENST00000580019 K7EPI3 171 aa3.2□□□□□ -1.9
KPNB1-208ENST00000580019 M0QYT0 321 aa3.2□□□□□ -1.9
KPNB1-208ENST00000580019 IFIT3O14879 490 aaKnown RBP3.2□□□□□ -1.9
KPNB1-208ENST00000580019 ZBTB43O43298 467 aa3.2□□□□□ -1.9
KPNB1-208ENST00000580019 LIASO43766 372 aa3.2□□□□□ -1.9
KPNB1-208ENST00000580019 NDUFS3O75489 264 aa3.2□□□□□ -1.9
KPNB1-208ENST00000580019 DDHD2O94830 711 aa3.2□□□□□ -1.9
KPNB1-208ENST00000580019 SNX4O95219 450 aa3.2□□□□□ -1.9
KPNB1-208ENST00000580019 SIX3O95343 332 aaPredicted RBP3.2□□□□□ -1.9
KPNB1-208ENST00000580019 C22orf31O95567 290 aa3.2□□□□□ -1.9
KPNB1-208ENST00000580019 APBB3O95704 486 aa3.2□□□□□ -1.9
KPNB1-208ENST00000580019 TUBBP07437 444 aa3.2□□□□□ -1.9
KPNB1-208ENST00000580019 HMOX1P09601 288 aa3.2□□□□□ -1.9
KPNB1-208ENST00000580019 SUPT20HL2P0C7V6 817 aa3.2□□□□□ -1.9
KPNB1-208ENST00000580019 CHRM3P20309 590 aa3.2□□□□□ -1.9
KPNB1-208ENST00000580019 ITGALP20701 1170 aa3.2□□□□□ -1.9
KPNB1-208ENST00000580019 GPD1P21695 349 aa3.2□□□□□ -1.9
KPNB1-208ENST00000580019 CASQ1P31415 396 aa3.2□□□□□ -1.9
KPNB1-208ENST00000580019 HTR7P34969 479 aa3.2□□□□□ -1.9
KPNB1-208ENST00000580019 TNNT2P45379 298 aaPredicted RBP3.2□□□□□ -1.9
KPNB1-208ENST00000580019 TOB1P50616 345 aaPredicted RBP3.2□□□□□ -1.9
KPNB1-208ENST00000580019 ZNF134P52741 427 aa3.2□□□□□ -1.9
KPNB1-208ENST00000580019 PNLIPRP2P54317 469 aa3.2□□□□□ -1.9
KPNB1-208ENST00000580019 FAM3BP58499 235 aaPredicted RBP3.2□□□□□ -1.9
KPNB1-208ENST00000580019 YBEYP58557 167 aaPredicted RBP3.2□□□□□ -1.9
KPNB1-208ENST00000580019 TIRAPP58753 221 aa3.2□□□□□ -1.9
KPNB1-208ENST00000580019 TUBB4BP68371 445 aa3.2□□□□□ -1.9
KPNB1-208ENST00000580019 TIAL1Q01085 375 aaKnown RBP eCLIP3.2□□□□□ -1.9
KPNB1-208ENST00000580019 TLE3Q04726 772 aa3.2□□□□□ -1.9
KPNB1-208ENST00000580019 NPRL3Q12980 569 aa3.2□□□□□ -1.9
KPNB1-208ENST00000580019 MRPL28Q13084 256 aaKnown RBP3.2□□□□□ -1.9
KPNB1-208ENST00000580019 ALKBH1Q13686 389 aaKnown RBP3.2□□□□□ -1.9
KPNB1-208ENST00000580019 CAPSQ13938 189 aa3.2□□□□□ -1.9
KPNB1-208ENST00000580019 ST3GAL2Q16842 350 aa3.2□□□□□ -1.9
KPNB1-208ENST00000580019 LETM2Q2VYF4 491 aa3.2□□□□□ -1.9
KPNB1-208ENST00000580019 KBTBD12Q3ZCT8 623 aa3.2□□□□□ -1.9
KPNB1-208ENST00000580019 SUPT20HL1Q3ZLR7 823 aa3.2□□□□□ -1.9
KPNB1-208ENST00000580019 MORN5Q5VZ52 161 aa3.2□□□□□ -1.9
KPNB1-208ENST00000580019 FAM90A2PQ658T7 463 aa3.2□□□□□ -1.9
KPNB1-208ENST00000580019 KIAA0930Q6ICG6 404 aaPredicted RBP3.2□□□□□ -1.9
KPNB1-208ENST00000580019 WDR93Q6P2C0 686 aa3.2□□□□□ -1.9
KPNB1-208ENST00000580019 TMEM108Q6UXF1 575 aa3.2□□□□□ -1.9
KPNB1-208ENST00000580019 GLDNQ6ZMI3 551 aaPredicted RBP3.2□□□□□ -1.9
KPNB1-208ENST00000580019 RBPMS2Q6ZRY4 209 aaKnown RBP3.2□□□□□ -1.9
KPNB1-208ENST00000580019 DEFB132Q7Z7B7 95 aa3.2□□□□□ -1.9
KPNB1-208ENST00000580019 TADA2BQ86TJ2 420 aa3.2□□□□□ -1.9
KPNB1-208ENST00000580019 TMEM110Q86TL2 294 aa3.2□□□□□ -1.9
KPNB1-208ENST00000580019 CEP57Q86XR8 500 aa3.2□□□□□ -1.9
KPNB1-208ENST00000580019 PLD5Q8N7P1 536 aa3.2□□□□□ -1.9
KPNB1-208ENST00000580019 C11orf44Q8N8P7 122 aa3.2□□□□□ -1.9
KPNB1-208ENST00000580019 RTL3Q8N8U3 475 aaKnown RBP3.2□□□□□ -1.9
KPNB1-208ENST00000580019 XXYLT1Q8NBI6 393 aa3.2□□□□□ -1.9
KPNB1-208ENST00000580019 ATAD1Q8NBU5 361 aa3.2□□□□□ -1.9
KPNB1-208ENST00000580019 CAMKVQ8NCB2 501 aa3.2□□□□□ -1.9
KPNB1-208ENST00000580019 PSD4Q8NDX1 1056 aa3.2□□□□□ -1.9
KPNB1-208ENST00000580019 IPMKQ8NFU5 416 aa3.2□□□□□ -1.9
KPNB1-208ENST00000580019 POC1BQ8TC44 478 aa3.2□□□□□ -1.9
KPNB1-208ENST00000580019 NSMCE1Q8WV22 266 aa3.2□□□□□ -1.9
KPNB1-208ENST00000580019 TMEM171Q8WVE6 324 aa3.2□□□□□ -1.9
KPNB1-208ENST00000580019 SGCDQ92629 289 aa3.2□□□□□ -1.9
KPNB1-208ENST00000580019 GTF3C6Q969F1 213 aa3.2□□□□□ -1.9
KPNB1-208ENST00000580019 SARAFQ96BY9 339 aa3.2□□□□□ -1.9
KPNB1-208ENST00000580019 CAMK1GQ96NX5 476 aa3.2□□□□□ -1.9
KPNB1-208ENST00000580019 MGME1Q9BQP7 344 aa3.2□□□□□ -1.9
KPNB1-208ENST00000580019 CLSTN3Q9BQT9 956 aa3.2□□□□□ -1.9
KPNB1-208ENST00000580019 H2AFJQ9BTM1 129 aa3.2□□□□□ -1.9
KPNB1-208ENST00000580019 VN1R3Q9BXE9 311 aa3.2□□□□□ -1.9
KPNB1-208ENST00000580019 TLR10Q9BXR5 811 aa3.2□□□□□ -1.9
KPNB1-208ENST00000580019 REXO4Q9GZR2 422 aaKnown RBP3.2□□□□□ -1.9
KPNB1-208ENST00000580019 NYXQ9GZU5 481 aa3.2□□□□□ -1.9
KPNB1-208ENST00000580019 ENKD1Q9H0I2 346 aa3.2□□□□□ -1.9
KPNB1-208ENST00000580019 ABCG8Q9H221 673 aa3.2□□□□□ -1.9
KPNB1-208ENST00000580019 DENND2DQ9H6A0 471 aaPredicted RBP3.2□□□□□ -1.9
KPNB1-208ENST00000580019 SCPEP1Q9HB40 452 aa3.2□□□□□ -1.9
KPNB1-208ENST00000580019 TRIM36Q9NQ86 728 aa3.2□□□□□ -1.9
KPNB1-208ENST00000580019 POLE3Q9NRF9 147 aa3.2□□□□□ -1.9
KPNB1-208ENST00000580019 MRPS18AQ9NVS2 196 aaKnown RBP3.2□□□□□ -1.9
KPNB1-208ENST00000580019 NCKIPSDQ9NZQ3 722 aa3.2□□□□□ -1.9
KPNB1-208ENST00000580019 OGFRQ9NZT2 677 aa3.2□□□□□ -1.9
KPNB1-208ENST00000580019 SH3BP4Q9P0V3 963 aa3.2□□□□□ -1.9
KPNB1-208ENST00000580019 RABL2AQ9UBK7 228 aaPredicted RBP3.2□□□□□ -1.9
KPNB1-208ENST00000580019 PEMTQ9UBM1 199 aa3.2□□□□□ -1.9
KPNB1-208ENST00000580019 ARMCX3Q9UH62 379 aaPredicted RBP3.2□□□□□ -1.9
KPNB1-208ENST00000580019 TSPYL4Q9UJ04 414 aa3.2□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms