RNA–Protein interactions for RNA: ENST00000579289.1

SUPT4H1-203, Transcript of SPT4 homolog, DSIF elongation factor subunit, humanhuman

TSL 3

Gene SUPT4H1, Length 318 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT4H1-203ENST00000579289 FAM114A1Q8IWE2 563 aa11.19□□□□□ -0.62
SUPT4H1-203ENST00000579289 SRRM1Q8IYB3 904 aaKnown RBP11.19□□□□□ -0.62
SUPT4H1-203ENST00000579289 CBARPQ8N350 705 aaPredicted RBP11.19□□□□□ -0.62
SUPT4H1-203ENST00000579289 C1orf131Q8NDD1 294 aaKnown RBP11.19□□□□□ -0.62
SUPT4H1-203ENST00000579289 ZDHHC1Q8WTX9 485 aa11.19□□□□□ -0.62
SUPT4H1-203ENST00000579289 HMCESQ96FZ2 354 aa11.19□□□□□ -0.62
SUPT4H1-203ENST00000579289 TEFMQ96QE5 360 aaKnown RBP11.19□□□□□ -0.62
SUPT4H1-203ENST00000579289 TMEM248Q9NWD8 314 aa11.19□□□□□ -0.62
SUPT4H1-203ENST00000579289 SIDT1Q9NXL6 827 aaKnown RBP11.19□□□□□ -0.62
SUPT4H1-203ENST00000579289 DONSONQ9NYP3 566 aa11.19□□□□□ -0.62
SUPT4H1-203ENST00000579289 RRN3Q9NYV6 651 aa11.19□□□□□ -0.62
SUPT4H1-203ENST00000579289 TAAR2Q9P1P5 351 aa11.19□□□□□ -0.62
SUPT4H1-203ENST00000579289 TMEM59LQ9UK28 342 aa11.19□□□□□ -0.62
SUPT4H1-203ENST00000579289 AJAP1Q9UKB5 411 aaPredicted RBP11.19□□□□□ -0.62
SUPT4H1-203ENST00000579289 DCHS2Q6V1P9 2916 aa11.19□□□□□ -0.62
SUPT4H1-203ENST00000579289 PRSS38A1L453 326 aa11.18□□□□□ -0.62
SUPT4H1-203ENST00000579289 GTPBP10A4D1E9 387 aaKnown RBP11.18□□□□□ -0.62
SUPT4H1-203ENST00000579289 CFAP69A5D8W1 941 aa11.18□□□□□ -0.62
SUPT4H1-203ENST00000579289 GOLGA6L22H0YM25 854 aa11.18□□□□□ -0.62
SUPT4H1-203ENST00000579289 DNAJB5O75953 348 aa11.18□□□□□ -0.62
SUPT4H1-203ENST00000579289 RECQL5O94762 991 aaPredicted RBP11.18□□□□□ -0.62
SUPT4H1-203ENST00000579289 STK17BO94768 372 aa11.18□□□□□ -0.62
SUPT4H1-203ENST00000579289 MAP3K6O95382 1288 aa11.18□□□□□ -0.62
SUPT4H1-203ENST00000579289 EML2O95834 649 aa11.18□□□□□ -0.62
SUPT4H1-203ENST00000579289 TCN2P20062 427 aa11.18□□□□□ -0.62
SUPT4H1-203ENST00000579289 PON1P27169 355 aa11.18□□□□□ -0.62
SUPT4H1-203ENST00000579289 CSTF2P33240 577 aaKnown RBP eCLIP11.18□□□□□ -0.62
SUPT4H1-203ENST00000579289 SULT1E1P49888 294 aa11.18□□□□□ -0.62
SUPT4H1-203ENST00000579289 SUOXP51687 545 aa11.18□□□□□ -0.62
SUPT4H1-203ENST00000579289 PMS2P54278 862 aa11.18□□□□□ -0.62
SUPT4H1-203ENST00000579289 RAB15P59190 212 aa11.18□□□□□ -0.62
SUPT4H1-203ENST00000579289 MAN2A1Q16706 1144 aa11.18□□□□□ -0.62
SUPT4H1-203ENST00000579289 EXOC3L4Q17RC7 722 aa11.18□□□□□ -0.62
SUPT4H1-203ENST00000579289 KRTAP21-3Q3LHN1 58 aa11.18□□□□□ -0.62
SUPT4H1-203ENST00000579289 ACBD5Q5T8D3 534 aaPredicted RBP11.18□□□□□ -0.62
SUPT4H1-203ENST00000579289 PAPD7Q5XG87 772 aaKnown RBP11.18□□□□□ -0.62
SUPT4H1-203ENST00000579289 AFMIDQ63HM1 303 aa11.18□□□□□ -0.62
SUPT4H1-203ENST00000579289 DPY19L2P1Q6NXN4 242 aa11.18□□□□□ -0.62
SUPT4H1-203ENST00000579289 C16orf46Q6P387 395 aa11.18□□□□□ -0.62
SUPT4H1-203ENST00000579289 LRRC31Q6UY01 552 aa11.18□□□□□ -0.62
SUPT4H1-203ENST00000579289 LIPIQ6XZB0 460 aa11.18□□□□□ -0.62
SUPT4H1-203ENST00000579289 RBM43Q6ZSC3 357 aaKnown RBP11.18□□□□□ -0.62
SUPT4H1-203ENST00000579289 HEATR4Q86WZ0 1026 aa11.18□□□□□ -0.62
SUPT4H1-203ENST00000579289 PASD1Q8IV76 773 aa11.18□□□□□ -0.62
SUPT4H1-203ENST00000579289 APLFQ8IW19 511 aaPredicted RBP11.18□□□□□ -0.62
SUPT4H1-203ENST00000579289 RYBPQ8N488 228 aaPredicted RBP11.18□□□□□ -0.62
SUPT4H1-203ENST00000579289 FRMD8Q9BZ67 464 aaPredicted RBP11.18□□□□□ -0.62
SUPT4H1-203ENST00000579289 SAMSN1Q9NSI8 373 aaKnown RBP11.18□□□□□ -0.62
SUPT4H1-203ENST00000579289 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP11.18□□□□□ -0.62
SUPT4H1-203ENST00000579289 AKAP7Q9P0M2 348 aaPredicted RBP11.18□□□□□ -0.62
SUPT4H1-203ENST00000579289 PLEKHM1Q9Y4G2 1056 aa11.18□□□□□ -0.62
SUPT4H1-203ENST00000579289 TACC2O95359 2948 aa11.17□□□□□ -0.62
SUPT4H1-203ENST00000579289 TTLL8A6PVC2 850 aa11.17□□□□□ -0.62
SUPT4H1-203ENST00000579289 MED7O43513 233 aa11.17□□□□□ -0.62
SUPT4H1-203ENST00000579289 PRKCSHP14314 528 aaPredicted RBP11.17□□□□□ -0.62
SUPT4H1-203ENST00000579289 RHOQP17081 205 aa11.17□□□□□ -0.62
SUPT4H1-203ENST00000579289 USP8P40818 1118 aa11.17□□□□□ -0.62
SUPT4H1-203ENST00000579289 RGRP47804 291 aa11.17□□□□□ -0.62
SUPT4H1-203ENST00000579289 DEUP1Q05D60 604 aa11.17□□□□□ -0.62
SUPT4H1-203ENST00000579289 VWA3BQ502W6 1294 aa11.17□□□□□ -0.62
SUPT4H1-203ENST00000579289 INO80DQ53TQ3 878 aaPredicted RBP11.17□□□□□ -0.62
SUPT4H1-203ENST00000579289 CT47A1Q5JQC4 288 aaPredicted RBP11.17□□□□□ -0.62
SUPT4H1-203ENST00000579289 MIIPQ5JXC2 388 aa11.17□□□□□ -0.62
SUPT4H1-203ENST00000579289 CHCHD2P9Q5T1J5 151 aaPredicted RBP11.17□□□□□ -0.62
SUPT4H1-203ENST00000579289 ENOSF1Q7L5Y1 443 aa11.17□□□□□ -0.62
SUPT4H1-203ENST00000579289 FAM131BQ86XD5 332 aa11.17□□□□□ -0.62
SUPT4H1-203ENST00000579289 XYLT1Q86Y38 959 aa11.17□□□□□ -0.62
SUPT4H1-203ENST00000579289 ATL2Q8NHH9 583 aa11.17□□□□□ -0.62
SUPT4H1-203ENST00000579289 ECHDC3Q96DC8 303 aa11.17□□□□□ -0.62
SUPT4H1-203ENST00000579289 SCARF2Q96GP6 870 aaPredicted RBP11.17□□□□□ -0.62
SUPT4H1-203ENST00000579289 TUBGCP2Q9BSJ2 902 aa11.17□□□□□ -0.62
SUPT4H1-203ENST00000579289 EFHD1Q9BUP0 239 aa11.17□□□□□ -0.62
SUPT4H1-203ENST00000579289 MAGEH1Q9H213 219 aa11.17□□□□□ -0.62
SUPT4H1-203ENST00000579289 NDST4Q9H3R1 872 aa11.17□□□□□ -0.62
SUPT4H1-203ENST00000579289 SUV39H2Q9H5I1 410 aa11.17□□□□□ -0.62
SUPT4H1-203ENST00000579289 SIX2Q9NPC8 291 aa11.17□□□□□ -0.62
SUPT4H1-203ENST00000579289 TRNAU1APQ9NX07 287 aaKnown RBP11.17□□□□□ -0.62
SUPT4H1-203ENST00000579289 APEX2Q9UBZ4 518 aa11.17□□□□□ -0.62
SUPT4H1-203ENST00000579289 DNAI1Q9UI46 699 aa11.17□□□□□ -0.62
SUPT4H1-203ENST00000579289 RPS6KL1Q9Y6S9 549 aa11.17□□□□□ -0.62
SUPT4H1-203ENST00000579289 GOLGA6L3A6NEY3 463 aa11.16□□□□□ -0.62
SUPT4H1-203ENST00000579289 RHPN2P1A8MT19 583 aa11.16□□□□□ -0.62
SUPT4H1-203ENST00000579289 MKRN2OSH3BPM6 223 aa11.16□□□□□ -0.62
SUPT4H1-203ENST00000579289 RECKO95980 971 aa11.16□□□□□ -0.62
SUPT4H1-203ENST00000579289 F9P00740 461 aa11.16□□□□□ -0.62
SUPT4H1-203ENST00000579289 CDH5P33151 784 aaPredicted RBP11.16□□□□□ -0.62
SUPT4H1-203ENST00000579289 CLCN1P35523 988 aa11.16□□□□□ -0.62
SUPT4H1-203ENST00000579289 SCNN1AP37088 669 aa11.16□□□□□ -0.62
SUPT4H1-203ENST00000579289 FASLGP48023 281 aa11.16□□□□□ -0.62
SUPT4H1-203ENST00000579289 MAPKAPK2P49137 400 aa11.16□□□□□ -0.62
SUPT4H1-203ENST00000579289 MC1RQ01726 317 aa11.16□□□□□ -0.62
SUPT4H1-203ENST00000579289 ELP6Q0PNE2 266 aa11.16□□□□□ -0.62
SUPT4H1-203ENST00000579289 SEMA5AQ13591 1074 aa11.16□□□□□ -0.62
SUPT4H1-203ENST00000579289 SEPT6Q14141 434 aa11.16□□□□□ -0.62
SUPT4H1-203ENST00000579289 POLD3Q15054 466 aaPredicted RBP11.16□□□□□ -0.62
SUPT4H1-203ENST00000579289 PNCKQ6P2M8 343 aa11.16□□□□□ -0.62
SUPT4H1-203ENST00000579289 ZNF761Q86XN6 746 aaPredicted RBP11.16□□□□□ -0.62
SUPT4H1-203ENST00000579289 ENOX1Q8TC92 643 aaKnown RBP11.16□□□□□ -0.62
SUPT4H1-203ENST00000579289 KIAA1524Q8TCG1 905 aa11.16□□□□□ -0.62
SUPT4H1-203ENST00000579289 SHC3Q92529 594 aa11.16□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms