RNA–Protein interactions for RNA: ENST00000577824.5

MKS1-206, Transcript of Meckel syndrome, type 1, humanhuman

TSL 5

Gene MKS1, Length 1,158 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-206ENST00000577824 SERPINB12Q96P63 405 aa12.71□□□□□ -0.37
MKS1-206ENST00000577824 LRRC1Q9BTT6 524 aa12.71□□□□□ -0.37
MKS1-206ENST00000577824 PHACTR1Q9C0D0 580 aa12.71□□□□□ -0.37
MKS1-206ENST00000577824 ZFYVE1Q9HBF4 777 aa12.71□□□□□ -0.37
MKS1-206ENST00000577824 GRHL1Q9NZI5 618 aa12.71□□□□□ -0.37
MKS1-206ENST00000577824 WHRNQ9P202 907 aa12.71□□□□□ -0.37
MKS1-206ENST00000577824 INVSQ9Y283 1065 aa12.71□□□□□ -0.37
MKS1-206ENST00000577824 NUMA1Q14980 2115 aa12.71□□□□□ -0.38
MKS1-206ENST00000577824 A0A1W2PPC4 97 aa12.7□□□□□ -0.38
MKS1-206ENST00000577824 MROH6A6NGR9 719 aa12.7□□□□□ -0.38
MKS1-206ENST00000577824 LDB2O43679 373 aa12.7□□□□□ -0.38
MKS1-206ENST00000577824 PPFIA2O75334 1257 aa12.7□□□□□ -0.38
MKS1-206ENST00000577824 TM7SF2O76062 418 aa12.7□□□□□ -0.38
MKS1-206ENST00000577824 RHOBTB1O94844 696 aa12.7□□□□□ -0.38
MKS1-206ENST00000577824 PCDH8O95206 1070 aa12.7□□□□□ -0.38
MKS1-206ENST00000577824 CLDN7O95471 211 aa12.7□□□□□ -0.38
MKS1-206ENST00000577824 HOXD12P35452 270 aa12.7□□□□□ -0.38
MKS1-206ENST00000577824 NBL1P41271 181 aa12.7□□□□□ -0.38
MKS1-206ENST00000577824 ZNF140P52738 457 aaPredicted RBP12.7□□□□□ -0.38
MKS1-206ENST00000577824 PDE1BQ01064 536 aa12.7□□□□□ -0.38
MKS1-206ENST00000577824 ARHGEF7Q14155 803 aa12.7□□□□□ -0.38
MKS1-206ENST00000577824 TAF1AQ15573 450 aaPredicted RBP12.7□□□□□ -0.38
MKS1-206ENST00000577824 SETMARQ53H47 684 aaPredicted RBP12.7□□□□□ -0.38
MKS1-206ENST00000577824 SYCP2LQ5T4T6 812 aa12.7□□□□□ -0.38
MKS1-206ENST00000577824 PPP1R21Q6ZMI0 780 aa12.7□□□□□ -0.38
MKS1-206ENST00000577824 GLT6D1Q7Z4J2 308 aa12.7□□□□□ -0.38
MKS1-206ENST00000577824 TECPR1Q7Z6L1 1165 aa12.7□□□□□ -0.38
MKS1-206ENST00000577824 NLRP8Q86W28 1048 aa12.7□□□□□ -0.38
MKS1-206ENST00000577824 TP53I13Q8NBR0 393 aaPredicted RBP12.7□□□□□ -0.38
MKS1-206ENST00000577824 LRRN4CLQ8ND94 238 aa12.7□□□□□ -0.38
MKS1-206ENST00000577824 C1orf216Q8TAB5 229 aa12.7□□□□□ -0.38
MKS1-206ENST00000577824 PTCD2Q8WV60 388 aaKnown RBP12.7□□□□□ -0.38
MKS1-206ENST00000577824 PEX13Q92968 403 aa12.7□□□□□ -0.38
MKS1-206ENST00000577824 DTD2Q96FN9 168 aa12.7□□□□□ -0.38
MKS1-206ENST00000577824 LOXL4Q96JB6 756 aa12.7□□□□□ -0.38
MKS1-206ENST00000577824 HSPA12BQ96MM6 686 aa12.7□□□□□ -0.38
MKS1-206ENST00000577824 KLF6Q99612 283 aaPredicted RBP12.7□□□□□ -0.38
MKS1-206ENST00000577824 WRAP53Q9BUR4 548 aaKnown RBP12.7□□□□□ -0.38
MKS1-206ENST00000577824 FAM129AQ9BZQ8 928 aa12.7□□□□□ -0.38
MKS1-206ENST00000577824 IL22Q9GZX6 179 aa12.7□□□□□ -0.38
MKS1-206ENST00000577824 CDH19Q9H159 772 aa12.7□□□□□ -0.38
MKS1-206ENST00000577824 EBF2Q9HAK2 575 aa12.7□□□□□ -0.38
MKS1-206ENST00000577824 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP12.7□□□□□ -0.38
MKS1-206ENST00000577824 IL17CQ9P0M4 197 aa12.7□□□□□ -0.38
MKS1-206ENST00000577824 RIMKLBQ9ULI2 386 aa12.7□□□□□ -0.38
MKS1-206ENST00000577824 LRRK1Q38SD2 2015 aa12.7□□□□□ -0.38
MKS1-206ENST00000577824 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa12.69□□□□□ -0.38
MKS1-206ENST00000577824 IGLON5A6NGN9 336 aa12.69□□□□□ -0.38
MKS1-206ENST00000577824 FAM47DPA6NHR8 397 aa12.69□□□□□ -0.38
MKS1-206ENST00000577824 WNT9AO14904 365 aa12.69□□□□□ -0.38
MKS1-206ENST00000577824 AURKAO14965 403 aa12.69□□□□□ -0.38
MKS1-206ENST00000577824 MMP20O60882 483 aa12.69□□□□□ -0.38
MKS1-206ENST00000577824 RECQL5O94762 991 aaPredicted RBP12.69□□□□□ -0.38
MKS1-206ENST00000577824 CRTAMO95727 393 aa12.69□□□□□ -0.38
MKS1-206ENST00000577824 PIRTP0C851 137 aa12.69□□□□□ -0.38
MKS1-206ENST00000577824 HNRNPA2B1P22626 353 aaKnown RBP12.69□□□□□ -0.38
MKS1-206ENST00000577824 CD27P26842 260 aa12.69□□□□□ -0.38
MKS1-206ENST00000577824 TEAD1P28347 426 aa12.69□□□□□ -0.38
MKS1-206ENST00000577824 DPP6P42658 865 aa12.69□□□□□ -0.38
MKS1-206ENST00000577824 PTGER3P43115 390 aa12.69□□□□□ -0.38
MKS1-206ENST00000577824 SPINT3P49223 89 aa12.69□□□□□ -0.38
MKS1-206ENST00000577824 ITGA8P53708 1063 aa12.69□□□□□ -0.38
MKS1-206ENST00000577824 MRPS25P82663 173 aaKnown RBP12.69□□□□□ -0.38
MKS1-206ENST00000577824 SEMG2Q02383 582 aa12.69□□□□□ -0.38
MKS1-206ENST00000577824 CAV1Q03135 178 aa12.69□□□□□ -0.38
MKS1-206ENST00000577824 ACVR1Q04771 509 aa12.69□□□□□ -0.38
MKS1-206ENST00000577824 DPTQ07507 201 aa12.69□□□□□ -0.38
MKS1-206ENST00000577824 LAMB3Q13751 1172 aa12.69□□□□□ -0.38
MKS1-206ENST00000577824 SIM2Q14190 667 aaPredicted RBP12.69□□□□□ -0.38
MKS1-206ENST00000577824 LYSMD4Q5XG99 296 aa12.69□□□□□ -0.38
MKS1-206ENST00000577824 ESRP1Q6NXG1 681 aaKnown RBP12.69□□□□□ -0.38
MKS1-206ENST00000577824 HSD11B1LQ7Z5J1 315 aa12.69□□□□□ -0.38
MKS1-206ENST00000577824 TMEFF1Q8IYR6 380 aa12.69□□□□□ -0.38
MKS1-206ENST00000577824 NRSN1Q8IZ57 195 aa12.69□□□□□ -0.38
MKS1-206ENST00000577824 DNAAF3Q8N9W5 541 aa12.69□□□□□ -0.38
MKS1-206ENST00000577824 BLOC1S5Q8TDH9 187 aa12.69□□□□□ -0.38
MKS1-206ENST00000577824 ART4Q93070 314 aa12.69□□□□□ -0.38
MKS1-206ENST00000577824 CENPTQ96BT3 561 aa12.69□□□□□ -0.38
MKS1-206ENST00000577824 PLEKHG4BQ96PX9 1271 aa12.69□□□□□ -0.38
MKS1-206ENST00000577824 C1QTNF7Q9BXJ2 289 aa12.69□□□□□ -0.38
MKS1-206ENST00000577824 SLC17A9Q9BYT1 436 aa12.69□□□□□ -0.38
MKS1-206ENST00000577824 SEMA4AQ9H3S1 761 aa12.69□□□□□ -0.38
MKS1-206ENST00000577824 MRM3Q9HC36 420 aaKnown RBP12.69□□□□□ -0.38
MKS1-206ENST00000577824 GPR27Q9NS67 375 aa12.69□□□□□ -0.38
MKS1-206ENST00000577824 DMGDHQ9UI17 866 aaKnown RBP12.69□□□□□ -0.38
MKS1-206ENST00000577824 R4GN57 208 aa12.69□□□□□ -0.38
MKS1-206ENST00000577824 A0A0U1RQS6 177 aa12.68□□□□□ -0.38
MKS1-206ENST00000577824 HEATR9A2RTY3 570 aa12.68□□□□□ -0.38
MKS1-206ENST00000577824 C2orf81A6NN90 581 aa12.68□□□□□ -0.38
MKS1-206ENST00000577824 MEI4A8MW99 385 aa12.68□□□□□ -0.38
MKS1-206ENST00000577824 E7ESA3 106 aa12.68□□□□□ -0.38
MKS1-206ENST00000577824 PRAMEF26H0Y7S4 382 aa12.68□□□□□ -0.38
MKS1-206ENST00000577824 H7C0S8 307 aa12.68□□□□□ -0.38
MKS1-206ENST00000577824 TOR1BO14657 336 aa12.68□□□□□ -0.38
MKS1-206ENST00000577824 MAP3K13O43283 966 aa12.68□□□□□ -0.38
MKS1-206ENST00000577824 FSBPO95073 299 aa12.68□□□□□ -0.38
MKS1-206ENST00000577824 EPN2O95208 641 aa12.68□□□□□ -0.38
MKS1-206ENST00000577824 ETV3P41162 512 aa12.68□□□□□ -0.38
MKS1-206ENST00000577824 NPY2RP49146 381 aa12.68□□□□□ -0.38
MKS1-206ENST00000577824 TUBB4BP68371 445 aa12.68□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms