RNA–Protein interactions for RNA: ENST00000577664.5

CDK5RAP3-204, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 4

Gene CDK5RAP3, Length 568 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-204ENST00000577664 C1QTNF3-AMACRE9PGA6 284 aa11.18□□□□□ -0.62
CDK5RAP3-204ENST00000577664 AREL1O15033 823 aa11.18□□□□□ -0.62
CDK5RAP3-204ENST00000577664 ATXN7O15265 892 aaPredicted RBP11.18□□□□□ -0.62
CDK5RAP3-204ENST00000577664 SLC7A4O43246 635 aa11.18□□□□□ -0.62
CDK5RAP3-204ENST00000577664 AP1G1O43747 822 aa11.18□□□□□ -0.62
CDK5RAP3-204ENST00000577664 PIGNO95427 931 aa11.18□□□□□ -0.62
CDK5RAP3-204ENST00000577664 TRBC1P01850 177 aa11.18□□□□□ -0.62
CDK5RAP3-204ENST00000577664 RHOXF2BP0C7M4 288 aa11.18□□□□□ -0.62
CDK5RAP3-204ENST00000577664 TIMP2P16035 220 aa11.18□□□□□ -0.62
CDK5RAP3-204ENST00000577664 MCM3P25205 808 aa11.18□□□□□ -0.62
CDK5RAP3-204ENST00000577664 GKP32189 559 aa11.18□□□□□ -0.62
CDK5RAP3-204ENST00000577664 SLC8A1P32418 973 aa11.18□□□□□ -0.62
CDK5RAP3-204ENST00000577664 DRD3P35462 400 aa11.18□□□□□ -0.62
CDK5RAP3-204ENST00000577664 CARSP49589 748 aaKnown RBP11.18□□□□□ -0.62
CDK5RAP3-204ENST00000577664 VPS41P49754 854 aa11.18□□□□□ -0.62
CDK5RAP3-204ENST00000577664 SFSWAPQ12872 951 aaKnown RBP11.18□□□□□ -0.62
CDK5RAP3-204ENST00000577664 CST6Q15828 149 aa11.18□□□□□ -0.62
CDK5RAP3-204ENST00000577664 CDKN3Q16667 212 aa11.18□□□□□ -0.62
CDK5RAP3-204ENST00000577664 QPCTQ16769 361 aa11.18□□□□□ -0.62
CDK5RAP3-204ENST00000577664 ERCC6LQ2NKX8 1250 aa11.18□□□□□ -0.62
CDK5RAP3-204ENST00000577664 SIRPB2Q5JXA9 342 aa11.18□□□□□ -0.62
CDK5RAP3-204ENST00000577664 TEX35Q5T0J7 233 aa11.18□□□□□ -0.62
CDK5RAP3-204ENST00000577664 FAXCQ5TGI0 409 aa11.18□□□□□ -0.62
CDK5RAP3-204ENST00000577664 ZNF776Q68DI1 518 aaPredicted RBP11.18□□□□□ -0.62
CDK5RAP3-204ENST00000577664 ZSWIM9Q86XI8 627 aa11.18□□□□□ -0.62
CDK5RAP3-204ENST00000577664 NDUFAF2Q8N183 169 aa11.18□□□□□ -0.62
CDK5RAP3-204ENST00000577664 DEFB124Q8NES8 71 aa11.18□□□□□ -0.62
CDK5RAP3-204ENST00000577664 OR6K2Q8NGY2 324 aa11.18□□□□□ -0.62
CDK5RAP3-204ENST00000577664 FBXO25Q8TCJ0 367 aa11.18□□□□□ -0.62
CDK5RAP3-204ENST00000577664 BRSK1Q8TDC3 778 aa11.18□□□□□ -0.62
CDK5RAP3-204ENST00000577664 PEX13Q92968 403 aa11.18□□□□□ -0.62
CDK5RAP3-204ENST00000577664 IFT43Q96FT9 208 aa11.18□□□□□ -0.62
CDK5RAP3-204ENST00000577664 PPP1R16AQ96I34 528 aa11.18□□□□□ -0.62
CDK5RAP3-204ENST00000577664 MRGPRX1Q96LB2 322 aa11.18□□□□□ -0.62
CDK5RAP3-204ENST00000577664 KLHL32Q96NJ5 620 aa11.18□□□□□ -0.62
CDK5RAP3-204ENST00000577664 SERPINB12Q96P63 405 aa11.18□□□□□ -0.62
CDK5RAP3-204ENST00000577664 RANBP9Q96S59 729 aa11.18□□□□□ -0.62
CDK5RAP3-204ENST00000577664 RHOXF2Q9BQY4 288 aa11.18□□□□□ -0.62
CDK5RAP3-204ENST00000577664 FSD1LQ9BXM9 530 aa11.18□□□□□ -0.62
CDK5RAP3-204ENST00000577664 KDM4CQ9H3R0 1056 aa11.18□□□□□ -0.62
CDK5RAP3-204ENST00000577664 TRABDQ9H4I3 376 aa11.18□□□□□ -0.62
CDK5RAP3-204ENST00000577664 ZDHHC6Q9H6R6 413 aa11.18□□□□□ -0.62
CDK5RAP3-204ENST00000577664 ZDHHC4Q9NPG8 344 aa11.18□□□□□ -0.62
CDK5RAP3-204ENST00000577664 ITM2CQ9NQX7 267 aa11.18□□□□□ -0.62
CDK5RAP3-204ENST00000577664 C2orf42Q9NWW7 574 aa11.18□□□□□ -0.62
CDK5RAP3-204ENST00000577664 DKK4Q9UBT3 224 aa11.18□□□□□ -0.62
CDK5RAP3-204ENST00000577664 CHKBQ9Y259 395 aa11.18□□□□□ -0.62
CDK5RAP3-204ENST00000577664 PCDHB9Q9Y5E1 797 aa11.18□□□□□ -0.62
CDK5RAP3-204ENST00000577664 PIEZO2Q9H5I5 2752 aa11.18□□□□□ -0.62
CDK5RAP3-204ENST00000577664 ANKRD36A6QL64 1941 aa11.17□□□□□ -0.62
CDK5RAP3-204ENST00000577664 ATG2BQ96BY7 2078 aa11.17□□□□□ -0.62
CDK5RAP3-204ENST00000577664 MROH6A6NGR9 719 aa11.17□□□□□ -0.62
CDK5RAP3-204ENST00000577664 UGT2B4P06133 528 aa11.17□□□□□ -0.62
CDK5RAP3-204ENST00000577664 GABRG2P18507 467 aa11.17□□□□□ -0.62
CDK5RAP3-204ENST00000577664 NFKBIAP25963 317 aa11.17□□□□□ -0.62
CDK5RAP3-204ENST00000577664 GRIA1P42261 906 aa11.17□□□□□ -0.62
CDK5RAP3-204ENST00000577664 WASP42768 502 aa11.17□□□□□ -0.62
CDK5RAP3-204ENST00000577664 TERF1P54274 439 aa11.17□□□□□ -0.62
CDK5RAP3-204ENST00000577664 PLTPP55058 493 aa11.17□□□□□ -0.62
CDK5RAP3-204ENST00000577664 CREB5Q02930 508 aa11.17□□□□□ -0.62
CDK5RAP3-204ENST00000577664 LAMB3Q13751 1172 aa11.17□□□□□ -0.62
CDK5RAP3-204ENST00000577664 KCTD19Q17RG1 926 aaPredicted RBP11.17□□□□□ -0.62
CDK5RAP3-204ENST00000577664 PLK5Q496M5 336 aa11.17□□□□□ -0.62
CDK5RAP3-204ENST00000577664 CEP128Q6ZU80 1094 aa11.17□□□□□ -0.62
CDK5RAP3-204ENST00000577664 CYS1Q717R9 158 aa11.17□□□□□ -0.62
CDK5RAP3-204ENST00000577664 ERN2Q76MJ5 926 aaKnown RBP11.17□□□□□ -0.62
CDK5RAP3-204ENST00000577664 RAB44Q7Z6P3 723 aaPredicted RBP11.17□□□□□ -0.62
CDK5RAP3-204ENST00000577664 CCNJLQ8IV13 435 aa11.17□□□□□ -0.62
CDK5RAP3-204ENST00000577664 MMAAQ8IVH4 418 aaKnown RBP11.17□□□□□ -0.62
CDK5RAP3-204ENST00000577664 ZNF843Q8N446 348 aa11.17□□□□□ -0.62
CDK5RAP3-204ENST00000577664 RYBPQ8N488 228 aaPredicted RBP11.17□□□□□ -0.62
CDK5RAP3-204ENST00000577664 IPMKQ8NFU5 416 aa11.17□□□□□ -0.62
CDK5RAP3-204ENST00000577664 DTX3LQ8TDB6 740 aa11.17□□□□□ -0.62
CDK5RAP3-204ENST00000577664 PTCD2Q8WV60 388 aaKnown RBP11.17□□□□□ -0.62
CDK5RAP3-204ENST00000577664 ARRDC3Q96B67 414 aa11.17□□□□□ -0.62
CDK5RAP3-204ENST00000577664 SIGLEC10Q96LC7 697 aa11.17□□□□□ -0.62
CDK5RAP3-204ENST00000577664 TRIM31Q9BZY9 425 aa11.17□□□□□ -0.62
CDK5RAP3-204ENST00000577664 IL22Q9GZX6 179 aa11.17□□□□□ -0.62
CDK5RAP3-204ENST00000577664 DPH5Q9H2P9 285 aa11.17□□□□□ -0.62
CDK5RAP3-204ENST00000577664 PABPC3Q9H361 631 aaKnown RBP11.17□□□□□ -0.62
CDK5RAP3-204ENST00000577664 CCDC86Q9H6F5 360 aaKnown RBP11.17□□□□□ -0.62
CDK5RAP3-204ENST00000577664 HACD3Q9P035 362 aa11.17□□□□□ -0.62
CDK5RAP3-204ENST00000577664 USP36Q9P275 1121 aaKnown RBP11.17□□□□□ -0.62
CDK5RAP3-204ENST00000577664 FZD4Q9ULV1 537 aa11.17□□□□□ -0.62
CDK5RAP3-204ENST00000577664 EML5Q05BV3 1969 aa11.16□□□□□ -0.62
CDK5RAP3-204ENST00000577664 ESYT3A0FGR9 886 aa11.16□□□□□ -0.62
CDK5RAP3-204ENST00000577664 SDR42E2A6NKP2 422 aa11.16□□□□□ -0.62
CDK5RAP3-204ENST00000577664 UPK3BL1B0FP48 263 aa11.16□□□□□ -0.62
CDK5RAP3-204ENST00000577664 UPK3BL2E5RIL1 263 aa11.16□□□□□ -0.62
CDK5RAP3-204ENST00000577664 BNIP3LO60238 219 aa11.16□□□□□ -0.62
CDK5RAP3-204ENST00000577664 IL1BP01584 269 aa11.16□□□□□ -0.62
CDK5RAP3-204ENST00000577664 ADRA1DP25100 572 aa11.16□□□□□ -0.62
CDK5RAP3-204ENST00000577664 HMGCLP35914 325 aa11.16□□□□□ -0.62
CDK5RAP3-204ENST00000577664 LMAN1P49257 510 aa11.16□□□□□ -0.62
CDK5RAP3-204ENST00000577664 NEK3P51956 506 aa11.16□□□□□ -0.62
CDK5RAP3-204ENST00000577664 SPARCL1Q14515 664 aa11.16□□□□□ -0.62
CDK5RAP3-204ENST00000577664 AGERQ15109 404 aa11.16□□□□□ -0.62
CDK5RAP3-204ENST00000577664 TMEM52BQ4KMG9 183 aa11.16□□□□□ -0.62
CDK5RAP3-204ENST00000577664 PIP5KL1Q5T9C9 394 aa11.16□□□□□ -0.62
CDK5RAP3-204ENST00000577664 NEK5Q6P3R8 708 aa11.16□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms