RNA–Protein interactions for RNA: ENST00000576958.1

PRPF8-215, Transcript of pre-mRNA processing factor 8, humanhuman

TSL 2

Gene PRPF8, Length 416 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF8-215ENST00000576958 HEATR4Q86WZ0 1026 aa12.05□□□□□ -0.48
PRPF8-215ENST00000576958 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP12.05□□□□□ -0.48
PRPF8-215ENST00000576958 PDCD6IPQ8WUM4 868 aaKnown RBP12.05□□□□□ -0.48
PRPF8-215ENST00000576958 BTBD6Q96KE9 485 aa12.05□□□□□ -0.48
PRPF8-215ENST00000576958 ZNF641Q96N77 438 aaPredicted RBP12.05□□□□□ -0.48
PRPF8-215ENST00000576958 ERGIC2Q96RQ1 377 aa12.05□□□□□ -0.48
PRPF8-215ENST00000576958 AGAP2Q99490 1192 aa12.05□□□□□ -0.48
PRPF8-215ENST00000576958 ATP13A3Q9H7F0 1226 aa12.05□□□□□ -0.48
PRPF8-215ENST00000576958 CARS2Q9HA77 564 aaKnown RBP12.05□□□□□ -0.48
PRPF8-215ENST00000576958 SP110Q9HB58 689 aa12.05□□□□□ -0.48
PRPF8-215ENST00000576958 TMEM51Q9NW97 253 aa12.05□□□□□ -0.48
PRPF8-215ENST00000576958 EIF2AK3Q9NZJ5 1116 aaKnown RBP12.05□□□□□ -0.48
PRPF8-215ENST00000576958 ZFC3H1O60293 1989 aaKnown RBP12.05□□□□□ -0.48
PRPF8-215ENST00000576958 RELNP78509 3460 aa12.05□□□□□ -0.48
PRPF8-215ENST00000576958 TRBV23OR9-2A0A075B6M9 112 aa12.04□□□□□ -0.48
PRPF8-215ENST00000576958 TMEM191CA6NGB0 347 aa12.04□□□□□ -0.48
PRPF8-215ENST00000576958 ARHGAP42A6NI28 874 aa12.04□□□□□ -0.48
PRPF8-215ENST00000576958 TMEM110-MUSTN1A8MSY1 372 aa12.04□□□□□ -0.48
PRPF8-215ENST00000576958 TOR1BO14657 336 aa12.04□□□□□ -0.48
PRPF8-215ENST00000576958 LRCH4O75427 683 aa12.04□□□□□ -0.48
PRPF8-215ENST00000576958 MAP3K6O95382 1288 aa12.04□□□□□ -0.48
PRPF8-215ENST00000576958 ECEL1O95672 775 aa12.04□□□□□ -0.48
PRPF8-215ENST00000576958 SOD1P00441 154 aa12.04□□□□□ -0.48
PRPF8-215ENST00000576958 JMJD7P0C870 316 aa12.04□□□□□ -0.48
PRPF8-215ENST00000576958 ITGB6P18564 788 aa12.04□□□□□ -0.48
PRPF8-215ENST00000576958 SERPINA4P29622 427 aa12.04□□□□□ -0.48
PRPF8-215ENST00000576958 ALDH4A1P30038 563 aa12.04□□□□□ -0.48
PRPF8-215ENST00000576958 CSF2RBP32927 897 aa12.04□□□□□ -0.48
PRPF8-215ENST00000576958 TRIM23P36406 574 aa12.04□□□□□ -0.48
PRPF8-215ENST00000576958 GNPDA1P46926 289 aa12.04□□□□□ -0.48
PRPF8-215ENST00000576958 BLKP51451 505 aa12.04□□□□□ -0.48
PRPF8-215ENST00000576958 MYL5Q02045 173 aa12.04□□□□□ -0.48
PRPF8-215ENST00000576958 CLCA4Q14CN2 919 aa12.04□□□□□ -0.48
PRPF8-215ENST00000576958 COLEC12Q5KU26 742 aa12.04□□□□□ -0.48
PRPF8-215ENST00000576958 ERMARDQ5T6L9 678 aa12.04□□□□□ -0.48
PRPF8-215ENST00000576958 SLC30A9Q6PML9 568 aa12.04□□□□□ -0.48
PRPF8-215ENST00000576958 LVRNQ6Q4G3 990 aa12.04□□□□□ -0.48
PRPF8-215ENST00000576958 SCG3Q8WXD2 468 aaKnown RBP12.04□□□□□ -0.48
PRPF8-215ENST00000576958 COL26A1Q96A83 441 aa12.04□□□□□ -0.48
PRPF8-215ENST00000576958 WBP1Q96G27 269 aa12.04□□□□□ -0.48
PRPF8-215ENST00000576958 TUBGCP5Q96RT8 1024 aa12.04□□□□□ -0.48
PRPF8-215ENST00000576958 HAUS4Q9H6D7 363 aa12.04□□□□□ -0.48
PRPF8-215ENST00000576958 WDR26Q9H7D7 661 aa12.04□□□□□ -0.48
PRPF8-215ENST00000576958 NOD2Q9HC29 1040 aa12.04□□□□□ -0.48
PRPF8-215ENST00000576958 MYO1AQ9UBC5 1043 aa12.04□□□□□ -0.48
PRPF8-215ENST00000576958 APPL1Q9UKG1 709 aa12.04□□□□□ -0.48
PRPF8-215ENST00000576958 SUFUQ9UMX1 484 aa12.04□□□□□ -0.48
PRPF8-215ENST00000576958 TMEM98Q9Y2Y6 226 aa12.04□□□□□ -0.48
PRPF8-215ENST00000576958 PCDHGA7Q9Y5G6 932 aa12.04□□□□□ -0.48
PRPF8-215ENST00000576958 PCDHGA4Q9Y5G9 962 aa12.04□□□□□ -0.48
PRPF8-215ENST00000576958 UBR5O95071 2799 aaPredicted RBP12.04□□□□□ -0.48
PRPF8-215ENST00000576958 GOLGA6CA6NDK9 693 aa12.03□□□□□ -0.48
PRPF8-215ENST00000576958 GOLGA6BA6NDN3 693 aa12.03□□□□□ -0.48
PRPF8-215ENST00000576958 CACNB4O00305 520 aaPredicted RBP12.03□□□□□ -0.48
PRPF8-215ENST00000576958 PPM1DO15297 605 aa12.03□□□□□ -0.48
PRPF8-215ENST00000576958 DAPK3O43293 454 aa12.03□□□□□ -0.48
PRPF8-215ENST00000576958 PDHA1P08559 390 aa12.03□□□□□ -0.48
PRPF8-215ENST00000576958 GOLGA6DP0CG33 693 aa12.03□□□□□ -0.48
PRPF8-215ENST00000576958 GLB1P16278 677 aa12.03□□□□□ -0.48
PRPF8-215ENST00000576958 CR2P20023 1033 aa12.03□□□□□ -0.48
PRPF8-215ENST00000576958 CSNK1DP48730 415 aa12.03□□□□□ -0.48
PRPF8-215ENST00000576958 MMRN1Q13201 1228 aa12.03□□□□□ -0.48
PRPF8-215ENST00000576958 LBRQ14739 615 aaKnown RBP12.03□□□□□ -0.48
PRPF8-215ENST00000576958 TBR1Q16650 682 aa12.03□□□□□ -0.48
PRPF8-215ENST00000576958 Q6ZVL8 140 aa12.03□□□□□ -0.48
PRPF8-215ENST00000576958 PAF1Q8N7H5 531 aa12.03□□□□□ -0.48
PRPF8-215ENST00000576958 HCAR2Q8TDS4 363 aa12.03□□□□□ -0.48
PRPF8-215ENST00000576958 HSPH1Q92598 858 aa12.03□□□□□ -0.48
PRPF8-215ENST00000576958 GRAMD1AQ96CP6 724 aa12.03□□□□□ -0.48
PRPF8-215ENST00000576958 NUS1Q96E22 293 aa12.03□□□□□ -0.48
PRPF8-215ENST00000576958 CCDC74BQ96LY2 380 aa12.03□□□□□ -0.48
PRPF8-215ENST00000576958 FRMD8Q9BZ67 464 aaPredicted RBP12.03□□□□□ -0.48
PRPF8-215ENST00000576958 ZWILCHQ9H900 591 aa12.03□□□□□ -0.48
PRPF8-215ENST00000576958 GOLGA6AQ9NYA3 693 aa12.03□□□□□ -0.48
PRPF8-215ENST00000576958 TAAR2Q9P1P5 351 aa12.03□□□□□ -0.48
PRPF8-215ENST00000576958 CNOT8Q9UFF9 292 aaKnown RBP12.03□□□□□ -0.48
PRPF8-215ENST00000576958 PRKAB1Q9Y478 270 aa12.03□□□□□ -0.48
PRPF8-215ENST00000576958 IGHV5-10-1A0A0J9YXX1 117 aa12.02□□□□□ -0.49
PRPF8-215ENST00000576958 ANKRD62A6NC57 917 aa12.02□□□□□ -0.49
PRPF8-215ENST00000576958 HTRA2O43464 458 aaPredicted RBP12.02□□□□□ -0.49
PRPF8-215ENST00000576958 HEXIM1O94992 359 aaKnown RBP12.02□□□□□ -0.49
PRPF8-215ENST00000576958 CPP00450 1065 aa12.02□□□□□ -0.49
PRPF8-215ENST00000576958 FTLP02792 175 aaPredicted RBP12.02□□□□□ -0.49
PRPF8-215ENST00000576958 CD48P09326 243 aa12.02□□□□□ -0.49
PRPF8-215ENST00000576958 LIPCP11150 499 aa12.02□□□□□ -0.49
PRPF8-215ENST00000576958 FGF3P11487 239 aaPredicted RBP12.02□□□□□ -0.49
PRPF8-215ENST00000576958 MYCLP1P12525 358 aaPredicted RBP12.02□□□□□ -0.49
PRPF8-215ENST00000576958 CCNB1P14635 433 aa12.02□□□□□ -0.49
PRPF8-215ENST00000576958 FERP16591 822 aa12.02□□□□□ -0.49
PRPF8-215ENST00000576958 CD1CP29017 333 aa12.02□□□□□ -0.49
PRPF8-215ENST00000576958 SUOXP51687 545 aa12.02□□□□□ -0.49
PRPF8-215ENST00000576958 CDK3Q00526 305 aa12.02□□□□□ -0.49
PRPF8-215ENST00000576958 CTBSQ01459 385 aa12.02□□□□□ -0.49
PRPF8-215ENST00000576958 IL10RBQ08334 325 aa12.02□□□□□ -0.49
PRPF8-215ENST00000576958 ARHGEF7Q14155 803 aa12.02□□□□□ -0.49
PRPF8-215ENST00000576958 MAP9Q49MG5 647 aa12.02□□□□□ -0.49
PRPF8-215ENST00000576958 CT47A1Q5JQC4 288 aaPredicted RBP12.02□□□□□ -0.49
PRPF8-215ENST00000576958 MARK2Q7KZI7 788 aaKnown RBP12.02□□□□□ -0.49
PRPF8-215ENST00000576958 C17orf82Q86X59 251 aaPredicted RBP12.02□□□□□ -0.49
PRPF8-215ENST00000576958 DTX1Q86Y01 620 aa12.02□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms