RNA–Protein interactions for RNA: ENST00000576940.1

NPLOC4-220, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 5

Gene NPLOC4, Length 216 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-220ENST00000576940 CAPN5O15484 640 aaPredicted RBP10.12□□□□□ -0.79
NPLOC4-220ENST00000576940 ZW10O43264 779 aa10.12□□□□□ -0.79
NPLOC4-220ENST00000576940 CREB3O43889 395 aa10.12□□□□□ -0.79
NPLOC4-220ENST00000576940 ELFN1P0C7U0 828 aa10.12□□□□□ -0.79
NPLOC4-220ENST00000576940 CSF2RBP32927 897 aa10.12□□□□□ -0.79
NPLOC4-220ENST00000576940 TSPAN7P41732 249 aa10.12□□□□□ -0.79
NPLOC4-220ENST00000576940 GPR3P46089 330 aa10.12□□□□□ -0.79
NPLOC4-220ENST00000576940 MTIF2P46199 727 aaKnown RBP10.12□□□□□ -0.79
NPLOC4-220ENST00000576940 UQCRFS1P47985 274 aa10.12□□□□□ -0.79
NPLOC4-220ENST00000576940 CD97P48960 835 aa10.12□□□□□ -0.79
NPLOC4-220ENST00000576940 YBEYP58557 167 aaPredicted RBP10.12□□□□□ -0.79
NPLOC4-220ENST00000576940 NOMO3P69849 1222 aa10.12□□□□□ -0.79
NPLOC4-220ENST00000576940 CTBSQ01459 385 aa10.12□□□□□ -0.79
NPLOC4-220ENST00000576940 CDC20Q12834 499 aa10.12□□□□□ -0.79
NPLOC4-220ENST00000576940 KLRB1Q12918 225 aa10.12□□□□□ -0.79
NPLOC4-220ENST00000576940 ACOX1Q15067 660 aa10.12□□□□□ -0.79
NPLOC4-220ENST00000576940 CLPPQ16740 277 aaPredicted RBP10.12□□□□□ -0.79
NPLOC4-220ENST00000576940 TSR1Q2NL82 804 aaKnown RBP10.12□□□□□ -0.79
NPLOC4-220ENST00000576940 LACTB2Q53H82 288 aaPredicted RBP10.12□□□□□ -0.79
NPLOC4-220ENST00000576940 SNAP47Q5SQN1 464 aa10.12□□□□□ -0.79
NPLOC4-220ENST00000576940 AFMIDQ63HM1 303 aa10.12□□□□□ -0.79
NPLOC4-220ENST00000576940 TMEM71Q6P5X7 295 aa10.12□□□□□ -0.79
NPLOC4-220ENST00000576940 STRADAQ7RTN6 431 aa10.12□□□□□ -0.79
NPLOC4-220ENST00000576940 SLFN11Q7Z7L1 901 aa10.12□□□□□ -0.79
NPLOC4-220ENST00000576940 SRLQ86TD4 932 aa10.12□□□□□ -0.79
NPLOC4-220ENST00000576940 ATCAYQ86WG3 371 aa10.12□□□□□ -0.79
NPLOC4-220ENST00000576940 NLGN4XQ8N0W4 816 aa10.12□□□□□ -0.79
NPLOC4-220ENST00000576940 BMPERQ8N8U9 685 aa10.12□□□□□ -0.79
NPLOC4-220ENST00000576940 TSEN2Q8NCE0 465 aaKnown RBP10.12□□□□□ -0.79
NPLOC4-220ENST00000576940 CCDC112Q8NEF3 446 aa10.12□□□□□ -0.79
NPLOC4-220ENST00000576940 NLGN4YQ8NFZ3 816 aaPredicted RBP10.12□□□□□ -0.79
NPLOC4-220ENST00000576940 SLC30A5Q8TAD4 765 aa10.12□□□□□ -0.79
NPLOC4-220ENST00000576940 FAM172AQ8WUF8 416 aa10.12□□□□□ -0.79
NPLOC4-220ENST00000576940 RNF31Q96EP0 1072 aa10.12□□□□□ -0.79
NPLOC4-220ENST00000576940 NSMCE3Q96MG7 304 aa10.12□□□□□ -0.79
NPLOC4-220ENST00000576940 WDR26Q9H7D7 661 aa10.12□□□□□ -0.79
NPLOC4-220ENST00000576940 APMAPQ9HDC9 416 aa10.12□□□□□ -0.79
NPLOC4-220ENST00000576940 SUFUQ9UMX1 484 aa10.12□□□□□ -0.79
NPLOC4-220ENST00000576940 TP53TG5Q9Y2B4 290 aa10.12□□□□□ -0.79
NPLOC4-220ENST00000576940 FHOD1Q9Y613 1164 aa10.12□□□□□ -0.79
NPLOC4-220ENST00000576940 MRPS18BQ9Y676 258 aaKnown RBP10.12□□□□□ -0.79
NPLOC4-220ENST00000576940 CACNA1DQ01668 2161 aa10.12□□□□□ -0.79
NPLOC4-220ENST00000576940 CREBBPQ92793 2442 aa10.12□□□□□ -0.79
NPLOC4-220ENST00000576940 SPTBN1Q01082 2364 aaKnown RBP10.11□□□□□ -0.79
NPLOC4-220ENST00000576940 TTC24A2A3L6 582 aaPredicted RBP10.11□□□□□ -0.79
NPLOC4-220ENST00000576940 PDE2AO00408 941 aaPredicted RBP10.11□□□□□ -0.79
NPLOC4-220ENST00000576940 MAP4P27816 1152 aaKnown RBP10.11□□□□□ -0.79
NPLOC4-220ENST00000576940 RFC1P35251 1148 aaPredicted RBP10.11□□□□□ -0.79
NPLOC4-220ENST00000576940 ANP32AP39687 249 aaKnown RBP10.11□□□□□ -0.79
NPLOC4-220ENST00000576940 PTPN9P43378 593 aa10.11□□□□□ -0.79
NPLOC4-220ENST00000576940 PPM1FP49593 454 aaPredicted RBP10.11□□□□□ -0.79
NPLOC4-220ENST00000576940 ILF3Q12906 894 aaKnown RBP eCLIP10.11□□□□□ -0.79
NPLOC4-220ENST00000576940 SQSTM1Q13501 440 aa10.11□□□□□ -0.79
NPLOC4-220ENST00000576940 GRM3Q14832 879 aa10.11□□□□□ -0.79
NPLOC4-220ENST00000576940 DENND2CQ68D51 928 aa10.11□□□□□ -0.79
NPLOC4-220ENST00000576940 SCYL2Q6P3W7 929 aa10.11□□□□□ -0.79
NPLOC4-220ENST00000576940 KDELC2Q7Z4H8 507 aa10.11□□□□□ -0.79
NPLOC4-220ENST00000576940 PAF1Q8N7H5 531 aa10.11□□□□□ -0.79
NPLOC4-220ENST00000576940 TEX19Q8NA77 164 aa10.11□□□□□ -0.79
NPLOC4-220ENST00000576940 MSANTD4Q8NCY6 345 aa10.11□□□□□ -0.79
NPLOC4-220ENST00000576940 KIAA1143Q96AT1 154 aaPredicted RBP10.11□□□□□ -0.79
NPLOC4-220ENST00000576940 CELF6Q96J87 481 aaKnown RBP10.11□□□□□ -0.79
NPLOC4-220ENST00000576940 C11orf70Q9BRQ4 267 aa10.11□□□□□ -0.79
NPLOC4-220ENST00000576940 PDFQ9HBH1 243 aa10.11□□□□□ -0.79
NPLOC4-220ENST00000576940 TRNAU1APQ9NX07 287 aaKnown RBP10.11□□□□□ -0.79
NPLOC4-220ENST00000576940 KCNK4Q9NYG8 393 aa10.11□□□□□ -0.79
NPLOC4-220ENST00000576940 DACH1Q9UI36 760 aa10.11□□□□□ -0.79
NPLOC4-220ENST00000576940 RWDD2AQ9UIY3 292 aa10.11□□□□□ -0.79
NPLOC4-220ENST00000576940 UNC79Q9P2D8 2635 aa10.11□□□□□ -0.79
NPLOC4-220ENST00000576940 WASH4PA8MWX3 477 aa10.1□□□□□ -0.79
NPLOC4-220ENST00000576940 AGFG2O95081 481 aa10.1□□□□□ -0.79
NPLOC4-220ENST00000576940 LSM8O95777 96 aaKnown RBP10.1□□□□□ -0.79
NPLOC4-220ENST00000576940 MYCLP1P12525 358 aaPredicted RBP10.1□□□□□ -0.79
NPLOC4-220ENST00000576940 TCN2P20062 427 aa10.1□□□□□ -0.79
NPLOC4-220ENST00000576940 GNLYP22749 145 aa10.1□□□□□ -0.79
NPLOC4-220ENST00000576940 MMP8P22894 467 aa10.1□□□□□ -0.79
NPLOC4-220ENST00000576940 F8A1P23610 371 aa10.1□□□□□ -0.79
NPLOC4-220ENST00000576940 SERPINA4P29622 427 aa10.1□□□□□ -0.79
NPLOC4-220ENST00000576940 ADCY8P40145 1251 aa10.1□□□□□ -0.79
NPLOC4-220ENST00000576940 RAB15P59190 212 aa10.1□□□□□ -0.79
NPLOC4-220ENST00000576940 POLR2LP62875 67 aaKnown RBP10.1□□□□□ -0.79
NPLOC4-220ENST00000576940 MC2RQ01718 297 aa10.1□□□□□ -0.79
NPLOC4-220ENST00000576940 BCL2L1Q07817 233 aa10.1□□□□□ -0.79
NPLOC4-220ENST00000576940 SEPT6Q14141 434 aa10.1□□□□□ -0.79
NPLOC4-220ENST00000576940 PARP15Q460N3 678 aa10.1□□□□□ -0.79
NPLOC4-220ENST00000576940 KLHDC7AQ5VTJ3 777 aa10.1□□□□□ -0.79
NPLOC4-220ENST00000576940 SMYD5Q6GMV2 418 aa10.1□□□□□ -0.79
NPLOC4-220ENST00000576940 WDR59Q6PJI9 974 aa10.1□□□□□ -0.79
NPLOC4-220ENST00000576940 DPPA4Q7L190 304 aa10.1□□□□□ -0.79
NPLOC4-220ENST00000576940 HEATR4Q86WZ0 1026 aa10.1□□□□□ -0.79
NPLOC4-220ENST00000576940 UMODL1-AS1Q8N2C9 162 aa10.1□□□□□ -0.79
NPLOC4-220ENST00000576940 SLC20A1Q8WUM9 679 aa10.1□□□□□ -0.79
NPLOC4-220ENST00000576940 STARD8Q92502 1023 aa10.1□□□□□ -0.79
NPLOC4-220ENST00000576940 NTAN1Q96AB6 310 aa10.1□□□□□ -0.79
NPLOC4-220ENST00000576940 ECHDC3Q96DC8 303 aa10.1□□□□□ -0.79
NPLOC4-220ENST00000576940 COQ10AQ96MF6 247 aa10.1□□□□□ -0.79
NPLOC4-220ENST00000576940 TUBGCP5Q96RT8 1024 aa10.1□□□□□ -0.79
NPLOC4-220ENST00000576940 NAA15Q9BXJ9 866 aaKnown RBP10.1□□□□□ -0.79
NPLOC4-220ENST00000576940 TEX101Q9BY14 249 aa10.1□□□□□ -0.79
NPLOC4-220ENST00000576940 FRMD8Q9BZ67 464 aaPredicted RBP10.1□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms