RNA–Protein interactions for RNA: ENST00000576222.1

PCDHGB3-201, Transcript of protocadherin gamma subfamily B, 3, humanhuman

TSL 1 (best) BASIC

Gene PCDHGB3, Length 4,727 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB3-201ENST00000576222 PCLAFQ15004 111 aa13.14□□□□□ -0.31
PCDHGB3-201ENST00000576222 SPATA19Q7Z5L4 167 aa13.14□□□□□ -0.31
PCDHGB3-201ENST00000576222 TOP1MTQ969P6 601 aa13.14□□□□□ -0.31
PCDHGB3-201ENST00000576222 OPTCQ9UBM4 332 aa13.14□□□□□ -0.31
PCDHGB3-201ENST00000576222 A0A0J9YVX5 310 aa13.14□□□□□ -0.31
PCDHGB3-201ENST00000576222 PIPSLA2A3N6 862 aa13.14□□□□□ -0.31
PCDHGB3-201ENST00000576222 FGF10O15520 208 aaPredicted RBP13.14□□□□□ -0.31
PCDHGB3-201ENST00000576222 GJB1P08034 283 aa13.14□□□□□ -0.31
PCDHGB3-201ENST00000576222 PTPN9P43378 593 aa13.14□□□□□ -0.31
PCDHGB3-201ENST00000576222 WNT3AP56704 352 aa13.14□□□□□ -0.31
PCDHGB3-201ENST00000576222 ARPC4P59998 168 aa13.14□□□□□ -0.31
PCDHGB3-201ENST00000576222 RPL38P63173 70 aaKnown RBP13.14□□□□□ -0.31
PCDHGB3-201ENST00000576222 CYP4F2P78329 520 aa13.14□□□□□ -0.31
PCDHGB3-201ENST00000576222 SLC25A11Q02978 314 aaKnown RBP13.14□□□□□ -0.31
PCDHGB3-201ENST00000576222 CYP4F3Q08477 520 aa13.14□□□□□ -0.31
PCDHGB3-201ENST00000576222 PYROXD2Q8N2H3 581 aa13.14□□□□□ -0.31
PCDHGB3-201ENST00000576222 MRPL45Q9BRJ2 306 aaKnown RBP13.14□□□□□ -0.31
PCDHGB3-201ENST00000576222 YTHDF1Q9BYJ9 559 aaKnown RBP13.14□□□□□ -0.31
PCDHGB3-201ENST00000576222 SPATC1LQ9H0A9 340 aa13.14□□□□□ -0.31
PCDHGB3-201ENST00000576222 MOV10Q9HCE1 1003 aaKnown RBP13.14□□□□□ -0.31
PCDHGB3-201ENST00000576222 ZFP14Q9HCL3 533 aa13.14□□□□□ -0.31
PCDHGB3-201ENST00000576222 SH3BP4Q9P0V3 963 aa13.14□□□□□ -0.31
PCDHGB3-201ENST00000576222 RPS6KA6Q9UK32 745 aa13.14□□□□□ -0.31
PCDHGB3-201ENST00000576222 KLHL20Q9Y2M5 609 aa13.14□□□□□ -0.31
PCDHGB3-201ENST00000576222 NR2E3Q9Y5X4 410 aa13.14□□□□□ -0.31
PCDHGB3-201ENST00000576222 LOC110117498-PIK3R3F6TDL0 507 aa13.13□□□□□ -0.31
PCDHGB3-201ENST00000576222 BCKDKO14874 412 aa13.13□□□□□ -0.31
PCDHGB3-201ENST00000576222 DENRO43583 198 aaKnown RBP13.13□□□□□ -0.31
PCDHGB3-201ENST00000576222 RGS10O43665 173 aa13.13□□□□□ -0.31
PCDHGB3-201ENST00000576222 EPN2O95208 641 aa13.13□□□□□ -0.31
PCDHGB3-201ENST00000576222 ZNF286BP0CG31 522 aa13.13□□□□□ -0.31
PCDHGB3-201ENST00000576222 FGF3P11487 239 aaPredicted RBP13.13□□□□□ -0.31
PCDHGB3-201ENST00000576222 NMBRP28336 390 aa13.13□□□□□ -0.31
PCDHGB3-201ENST00000576222 ALDH4A1P30038 563 aa13.13□□□□□ -0.31
PCDHGB3-201ENST00000576222 C11orf91Q3C1V1 193 aa13.13□□□□□ -0.31
PCDHGB3-201ENST00000576222 FKBP1CQ5VVH2 108 aa13.13□□□□□ -0.31
PCDHGB3-201ENST00000576222 CASP12Q6UXS9 341 aa13.13□□□□□ -0.31
PCDHGB3-201ENST00000576222 GLT6D1Q7Z4J2 308 aa13.13□□□□□ -0.31
PCDHGB3-201ENST00000576222 FLCNQ8NFG4 579 aa13.13□□□□□ -0.31
PCDHGB3-201ENST00000576222 ZNF696Q9H7X3 374 aa13.13□□□□□ -0.31
PCDHGB3-201ENST00000576222 PSME2Q9UL46 239 aa13.13□□□□□ -0.31
PCDHGB3-201ENST00000576222 PADI4Q9UM07 663 aa13.13□□□□□ -0.31
PCDHGB3-201ENST00000576222 SLC12A8A0AV02 714 aa13.13□□□□□ -0.31
PCDHGB3-201ENST00000576222 SH3PXD2BA1X283 911 aa13.13□□□□□ -0.31
PCDHGB3-201ENST00000576222 TFPTP0C1Z6 253 aa13.13□□□□□ -0.31
PCDHGB3-201ENST00000576222 POLR2JP52435 117 aaKnown RBP13.13□□□□□ -0.31
PCDHGB3-201ENST00000576222 TAS2R39P59534 338 aa13.13□□□□□ -0.31
PCDHGB3-201ENST00000576222 HECTD2Q5U5R9 776 aa13.13□□□□□ -0.31
PCDHGB3-201ENST00000576222 HEXDCQ8WVB3 486 aa13.13□□□□□ -0.31
PCDHGB3-201ENST00000576222 GLOD4Q9HC38 313 aa13.13□□□□□ -0.31
PCDHGB3-201ENST00000576222 SPATA2Q9UM82 520 aa13.13□□□□□ -0.31
PCDHGB3-201ENST00000576222 KIF1AQ12756 1690 aa13.13□□□□□ -0.31
PCDHGB3-201ENST00000576222 MYH13Q9UKX3 1938 aa13.13□□□□□ -0.31
PCDHGB3-201ENST00000576222 FAM220BPB1ANY3 271 aa13.13□□□□□ -0.31
PCDHGB3-201ENST00000576222 MYL12BO14950 172 aa13.13□□□□□ -0.31
PCDHGB3-201ENST00000576222 SLC11A2P49281 568 aa13.13□□□□□ -0.31
PCDHGB3-201ENST00000576222 ZNF460Q14592 562 aa13.13□□□□□ -0.31
PCDHGB3-201ENST00000576222 THOC7Q6I9Y2 204 aaKnown RBP13.13□□□□□ -0.31
PCDHGB3-201ENST00000576222 NIPAL1Q6NVV3 410 aa13.13□□□□□ -0.31
PCDHGB3-201ENST00000576222 OTOP3Q7RTS5 596 aa13.13□□□□□ -0.31
PCDHGB3-201ENST00000576222 CCDC185Q8N715 623 aa13.13□□□□□ -0.31
PCDHGB3-201ENST00000576222 MINDY2Q8NBR6 621 aa13.13□□□□□ -0.31
PCDHGB3-201ENST00000576222 FBXO32Q969P5 355 aa13.13□□□□□ -0.31
PCDHGB3-201ENST00000576222 H3BN98 237 aa13.13□□□□□ -0.31
PCDHGB3-201ENST00000576222 TMCC2O75069 709 aa13.13□□□□□ -0.31
PCDHGB3-201ENST00000576222 UGT2B11O75310 529 aa13.13□□□□□ -0.31
PCDHGB3-201ENST00000576222 ARL2P36404 184 aa13.13□□□□□ -0.31
PCDHGB3-201ENST00000576222 ITGA1P56199 1179 aa13.13□□□□□ -0.31
PCDHGB3-201ENST00000576222 PRKCQQ04759 706 aa13.13□□□□□ -0.31
PCDHGB3-201ENST00000576222 CHADLQ6NUI6 762 aa13.13□□□□□ -0.31
PCDHGB3-201ENST00000576222 KLHL35Q6PF15 583 aa13.13□□□□□ -0.31
PCDHGB3-201ENST00000576222 FBXO27Q8NI29 283 aa13.13□□□□□ -0.31
PCDHGB3-201ENST00000576222 ISOC1Q96CN7 298 aa13.13□□□□□ -0.31
PCDHGB3-201ENST00000576222 SIGLEC10Q96LC7 697 aa13.13□□□□□ -0.31
PCDHGB3-201ENST00000576222 TMEM9Q9P0T7 183 aa13.13□□□□□ -0.31
PCDHGB3-201ENST00000576222 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP13.13□□□□□ -0.31
PCDHGB3-201ENST00000576222 DHX15O43143 795 aaKnown RBP13.12□□□□□ -0.31
PCDHGB3-201ENST00000576222 HTRA2O43464 458 aaPredicted RBP13.12□□□□□ -0.31
PCDHGB3-201ENST00000576222 ZNF7P17097 686 aaPredicted RBP13.12□□□□□ -0.31
PCDHGB3-201ENST00000576222 OR1E1P30953 314 aa13.12□□□□□ -0.31
PCDHGB3-201ENST00000576222 CCT3P49368 545 aaKnown RBP13.12□□□□□ -0.31
PCDHGB3-201ENST00000576222 BCAP31P51572 246 aa13.12□□□□□ -0.31
PCDHGB3-201ENST00000576222 TBX4P57082 545 aa13.12□□□□□ -0.31
PCDHGB3-201ENST00000576222 ATP6V0D1P61421 351 aa13.12□□□□□ -0.31
PCDHGB3-201ENST00000576222 COPZ1P61923 177 aa13.12□□□□□ -0.31
PCDHGB3-201ENST00000576222 QPRTQ15274 297 aa13.12□□□□□ -0.31
PCDHGB3-201ENST00000576222 GALNT5Q7Z7M9 940 aa13.12□□□□□ -0.31
PCDHGB3-201ENST00000576222 MCOLN3Q8TDD5 553 aa13.12□□□□□ -0.31
PCDHGB3-201ENST00000576222 POP5Q969H6 163 aaKnown RBP13.12□□□□□ -0.31
PCDHGB3-201ENST00000576222 RNFT2Q96EX2 444 aa13.12□□□□□ -0.31
PCDHGB3-201ENST00000576222 POLR1EQ9GZS1 481 aaKnown RBP13.12□□□□□ -0.31
PCDHGB3-201ENST00000576222 GBA3Q9H227 469 aa13.12□□□□□ -0.31
PCDHGB3-201ENST00000576222 ZBTB26Q9HCK0 441 aa13.12□□□□□ -0.31
PCDHGB3-201ENST00000576222 RASSF1Q9NS23 344 aa13.12□□□□□ -0.31
PCDHGB3-201ENST00000576222 TIMM22Q9Y584 194 aa13.12□□□□□ -0.31
PCDHGB3-201ENST00000576222 FFAR3O14843 346 aa13.12□□□□□ -0.31
PCDHGB3-201ENST00000576222 GPR42O15529 346 aa13.12□□□□□ -0.31
PCDHGB3-201ENST00000576222 ABCB1P08183 1280 aaPredicted RBP13.12□□□□□ -0.31
PCDHGB3-201ENST00000576222 NNMTP40261 264 aa13.12□□□□□ -0.31
PCDHGB3-201ENST00000576222 GRIK4Q16099 956 aa13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms