RNA–Protein interactions for RNA: ENST00000573203.5

NDE1-207, Transcript of nudE neurodevelopment protein 1, humanhuman

TSL 3

Gene NDE1, Length 762 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1-207ENST00000573203 FAF2Q96CS3 445 aa9.12□□□□□ -0.95
NDE1-207ENST00000573203 HES6Q96HZ4 224 aa9.12□□□□□ -0.95
NDE1-207ENST00000573203 MAK16Q9BXY0 300 aaKnown RBP9.12□□□□□ -0.95
NDE1-207ENST00000573203 CAAP1Q9H8G2 361 aa9.12□□□□□ -0.95
NDE1-207ENST00000573203 NOD2Q9HC29 1040 aa9.12□□□□□ -0.95
NDE1-207ENST00000573203 MBNL1Q9NR56 388 aaKnown RBP9.12□□□□□ -0.95
NDE1-207ENST00000573203 HAUS2Q9NVX0 235 aa9.12□□□□□ -0.95
NDE1-207ENST00000573203 UCKL1Q9NWZ5 548 aa9.12□□□□□ -0.95
NDE1-207ENST00000573203 PCDHGC4Q9Y5F7 938 aa9.12□□□□□ -0.95
NDE1-207ENST00000573203 PCDHGA1Q9Y5H4 931 aa9.12□□□□□ -0.95
NDE1-207ENST00000573203 CCDC151A5D8V7 595 aa9.11□□□□□ -0.95
NDE1-207ENST00000573203 CFAP69A5D8W1 941 aa9.11□□□□□ -0.95
NDE1-207ENST00000573203 FAM221BA6H8Z2 402 aa9.11□□□□□ -0.95
NDE1-207ENST00000573203 A8MX80 341 aa9.11□□□□□ -0.95
NDE1-207ENST00000573203 MIF4GDA9UHW6 222 aaKnown RBP9.11□□□□□ -0.95
NDE1-207ENST00000573203 TRIM38O00635 465 aa9.11□□□□□ -0.95
NDE1-207ENST00000573203 SCAMP1O15126 338 aa9.11□□□□□ -0.95
NDE1-207ENST00000573203 MATN3O15232 486 aa9.11□□□□□ -0.95
NDE1-207ENST00000573203 HTRA2O43464 458 aaPredicted RBP9.11□□□□□ -0.95
NDE1-207ENST00000573203 SIGLEC6O43699 453 aa9.11□□□□□ -0.95
NDE1-207ENST00000573203 SPOPO43791 374 aa9.11□□□□□ -0.95
NDE1-207ENST00000573203 RFPL3O75679 317 aa9.11□□□□□ -0.95
NDE1-207ENST00000573203 S1PR4O95977 384 aa9.11□□□□□ -0.95
NDE1-207ENST00000573203 CPP00450 1065 aa9.11□□□□□ -0.95
NDE1-207ENST00000573203 KRT1P04264 644 aa9.11□□□□□ -0.95
NDE1-207ENST00000573203 PCCBP05166 539 aa9.11□□□□□ -0.95
NDE1-207ENST00000573203 C1SP09871 688 aa9.11□□□□□ -0.95
NDE1-207ENST00000573203 CDK4P11802 303 aa9.11□□□□□ -0.95
NDE1-207ENST00000573203 NME1P15531 152 aaKnown RBP9.11□□□□□ -0.95
NDE1-207ENST00000573203 CKMT2P17540 419 aa9.11□□□□□ -0.95
NDE1-207ENST00000573203 MX2P20592 715 aa9.11□□□□□ -0.95
NDE1-207ENST00000573203 CCNCP24863 283 aa9.11□□□□□ -0.95
NDE1-207ENST00000573203 SLC1A1P43005 524 aa9.11□□□□□ -0.95
NDE1-207ENST00000573203 ACADVLP49748 655 aa9.11□□□□□ -0.95
NDE1-207ENST00000573203 DAB2P98082 770 aa9.11□□□□□ -0.95
NDE1-207ENST00000573203 GBE1Q04446 702 aa9.11□□□□□ -0.95
NDE1-207ENST00000573203 EIF2B5Q13144 721 aaKnown RBP9.11□□□□□ -0.95
NDE1-207ENST00000573203 ZNF211Q13398 564 aaPredicted RBP9.11□□□□□ -0.95
NDE1-207ENST00000573203 NAA30Q147X3 362 aaPredicted RBP9.11□□□□□ -0.95
NDE1-207ENST00000573203 AGERQ15109 404 aa9.11□□□□□ -0.95
NDE1-207ENST00000573203 WSCD2Q2TBF2 565 aa9.11□□□□□ -0.95
NDE1-207ENST00000573203 TPRG1LQ5T0D9 272 aa9.11□□□□□ -0.95
NDE1-207ENST00000573203 ARMC12Q5T9G4 340 aa9.11□□□□□ -0.95
NDE1-207ENST00000573203 LIPIQ6XZB0 460 aa9.11□□□□□ -0.95
NDE1-207ENST00000573203 CCNI2Q6ZMN8 369 aaPredicted RBP9.11□□□□□ -0.95
NDE1-207ENST00000573203 MACC1Q6ZN28 852 aa9.11□□□□□ -0.95
NDE1-207ENST00000573203 DPPA4Q7L190 304 aa9.11□□□□□ -0.95
NDE1-207ENST00000573203 TMPRSS7Q7RTY8 843 aa9.11□□□□□ -0.95
NDE1-207ENST00000573203 RHOT1Q8IXI2 618 aa9.11□□□□□ -0.95
NDE1-207ENST00000573203 RASGEF1CQ8N431 466 aa9.11□□□□□ -0.95
NDE1-207ENST00000573203 TEX26Q8N6G2 289 aa9.11□□□□□ -0.95
NDE1-207ENST00000573203 PQLC3Q8N755 202 aa9.11□□□□□ -0.95
NDE1-207ENST00000573203 CCNYQ8ND76 341 aa9.11□□□□□ -0.95
NDE1-207ENST00000573203 LRRN4CLQ8ND94 238 aa9.11□□□□□ -0.95
NDE1-207ENST00000573203 ZNF548Q8NEK5 533 aaPredicted RBP9.11□□□□□ -0.95
NDE1-207ENST00000573203 ACTRT1Q8TDG2 376 aa9.11□□□□□ -0.95
NDE1-207ENST00000573203 LMX1AQ8TE12 382 aa9.11□□□□□ -0.95
NDE1-207ENST00000573203 BTN2A2Q8WVV5 523 aa9.11□□□□□ -0.95
NDE1-207ENST00000573203 MAML1Q92585 1016 aa9.11□□□□□ -0.95
NDE1-207ENST00000573203 NSMCE3Q96MG7 304 aa9.11□□□□□ -0.95
NDE1-207ENST00000573203 TSGA13Q96PP4 275 aa9.11□□□□□ -0.95
NDE1-207ENST00000573203 RNF157Q96PX1 679 aa9.11□□□□□ -0.95
NDE1-207ENST00000573203 SEMA3CQ99985 751 aa9.11□□□□□ -0.95
NDE1-207ENST00000573203 DUSP23Q9BVJ7 150 aa9.11□□□□□ -0.95
NDE1-207ENST00000573203 SLC13A1Q9BZW2 595 aa9.11□□□□□ -0.95
NDE1-207ENST00000573203 POLR1EQ9GZS1 481 aaKnown RBP9.11□□□□□ -0.95
NDE1-207ENST00000573203 RBM22Q9NW64 420 aaKnown RBP eCLIP9.11□□□□□ -0.951e-7■■□□□ 13.6
NDE1-207ENST00000573203 DDX56Q9NY93 547 aaKnown RBP9.11□□□□□ -0.95
NDE1-207ENST00000573203 NLGN3Q9NZ94 848 aa9.11□□□□□ -0.95
NDE1-207ENST00000573203 B4GALT6Q9UBX8 382 aa9.11□□□□□ -0.95
NDE1-207ENST00000573203 APOBEC3BQ9UH17 382 aaKnown RBP9.11□□□□□ -0.95
NDE1-207ENST00000573203 PHTF1Q9UMS5 762 aa9.11□□□□□ -0.95
NDE1-207ENST00000573203 TTLL3Q9Y4R7 772 aa9.11□□□□□ -0.95
NDE1-207ENST00000573203 SPEGQ15772 3267 aa9.11□□□□□ -0.95
NDE1-207ENST00000573203 EPG5Q9HCE0 2579 aa9.1□□□□□ -0.95
NDE1-207ENST00000573203 TMEM8BA6NDV4 472 aa9.1□□□□□ -0.95
NDE1-207ENST00000573203 ZNF487B1APH4 448 aa9.1□□□□□ -0.95
NDE1-207ENST00000573203 APOL1O14791 398 aa9.1□□□□□ -0.95
NDE1-207ENST00000573203 AQP9O43315 295 aa9.1□□□□□ -0.95
NDE1-207ENST00000573203 RECQL5O94762 991 aaPredicted RBP9.1□□□□□ -0.95
NDE1-207ENST00000573203 CYP2A6P11509 494 aaPredicted RBP9.1□□□□□ -0.95
NDE1-207ENST00000573203 CCNB1P14635 433 aa9.1□□□□□ -0.95
NDE1-207ENST00000573203 ZFXP17010 805 aaPredicted RBP9.1□□□□□ -0.95
NDE1-207ENST00000573203 COMTP21964 271 aa9.1□□□□□ -0.95
NDE1-207ENST00000573203 ACP1P24666 158 aa9.1□□□□□ -0.95
NDE1-207ENST00000573203 HTR1BP28222 390 aa9.1□□□□□ -0.95
NDE1-207ENST00000573203 VIPR1P32241 457 aa9.1□□□□□ -0.95
NDE1-207ENST00000573203 PEX5P50542 639 aa9.1□□□□□ -0.95
NDE1-207ENST00000573203 PPARDQ03181 441 aa9.1□□□□□ -0.95
NDE1-207ENST00000573203 TRAF2Q12933 501 aa9.1□□□□□ -0.95
NDE1-207ENST00000573203 RALGDSQ12967 914 aa9.1□□□□□ -0.95
NDE1-207ENST00000573203 MTM1Q13496 603 aa9.1□□□□□ -0.95
NDE1-207ENST00000573203 INPP5AQ14642 412 aa9.1□□□□□ -0.95
NDE1-207ENST00000573203 ACOX1Q15067 660 aa9.1□□□□□ -0.95
NDE1-207ENST00000573203 PPP2R5EQ16537 467 aa9.1□□□□□ -0.95
NDE1-207ENST00000573203 MSS51Q4VC12 460 aa9.1□□□□□ -0.95
NDE1-207ENST00000573203 PRRT3Q5FWE3 981 aa9.1□□□□□ -0.95
NDE1-207ENST00000573203 FAXCQ5TGI0 409 aa9.1□□□□□ -0.95
NDE1-207ENST00000573203 LRRC38Q5VT99 294 aa9.1□□□□□ -0.95
NDE1-207ENST00000573203 DENND2CQ68D51 928 aa9.1□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 71.5 ms