RNA–Protein interactions for RNA: ENST00000571739.5

TRAPPC1-203, Transcript of trafficking protein particle complex 1, humanhuman

TSL 3

Gene TRAPPC1, Length 648 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC1-203ENST00000571739 KANSL1Q7Z3B3 1105 aa8.7□□□□□ -1.02
TRAPPC1-203ENST00000571739 TMC3Q7Z5M5 1100 aa8.7□□□□□ -1.02
TRAPPC1-203ENST00000571739 PIP4P1Q86T03 277 aa8.7□□□□□ -1.02
TRAPPC1-203ENST00000571739 PRUNE1Q86TP1 453 aa8.7□□□□□ -1.02
TRAPPC1-203ENST00000571739 GATAD2AQ86YP4 633 aa8.7□□□□□ -1.02
TRAPPC1-203ENST00000571739 CDKL3Q8IVW4 592 aaPredicted RBP8.7□□□□□ -1.02
TRAPPC1-203ENST00000571739 KLHDC8BQ8IXV7 354 aa8.7□□□□□ -1.02
TRAPPC1-203ENST00000571739 NDUFAF2Q8N183 169 aa8.7□□□□□ -1.02
TRAPPC1-203ENST00000571739 RASGEF1CQ8N431 466 aa8.7□□□□□ -1.02
TRAPPC1-203ENST00000571739 FAM71DQ8N9W8 422 aa8.7□□□□□ -1.02
TRAPPC1-203ENST00000571739 GLIS1Q8NBF1 620 aa8.7□□□□□ -1.02
TRAPPC1-203ENST00000571739 DENND6BQ8NEG7 585 aa8.7□□□□□ -1.02
TRAPPC1-203ENST00000571739 FAM174AQ8TBP5 190 aa8.7□□□□□ -1.02
TRAPPC1-203ENST00000571739 SAP25Q8TEE9 199 aa8.7□□□□□ -1.02
TRAPPC1-203ENST00000571739 SKA1Q96BD8 255 aa8.7□□□□□ -1.02
TRAPPC1-203ENST00000571739 MS4A14Q96JA4 679 aa8.7□□□□□ -1.02
TRAPPC1-203ENST00000571739 CAMK1GQ96NX5 476 aa8.7□□□□□ -1.02
TRAPPC1-203ENST00000571739 WDR24Q96S15 920 aa8.7□□□□□ -1.02
TRAPPC1-203ENST00000571739 APOOQ9BUR5 198 aa8.7□□□□□ -1.02
TRAPPC1-203ENST00000571739 LGR4Q9BXB1 951 aa8.7□□□□□ -1.02
TRAPPC1-203ENST00000571739 ABCG8Q9H221 673 aa8.7□□□□□ -1.02
TRAPPC1-203ENST00000571739 GDF3Q9NR23 364 aa8.7□□□□□ -1.02
TRAPPC1-203ENST00000571739 RSPH14Q9UHP6 348 aa8.7□□□□□ -1.02
TRAPPC1-203ENST00000571739 CDV3Q9UKY7 258 aaKnown RBP8.7□□□□□ -1.02
TRAPPC1-203ENST00000571739 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP8.7□□□□□ -1.022e-6■■■□□ 16.4
TRAPPC1-203ENST00000571739 CABIN1Q9Y6J0 2220 aa8.7□□□□□ -1.02
TRAPPC1-203ENST00000571739 GVINP1Q7Z2Y8 2422 aa8.7□□□□□ -1.02
TRAPPC1-203ENST00000571739 PIEZO1Q92508 2521 aa8.7□□□□□ -1.02
TRAPPC1-203ENST00000571739 CAPN8A6NHC0 703 aa8.69□□□□□ -1.02
TRAPPC1-203ENST00000571739 K7ESM1 405 aa8.69□□□□□ -1.02
TRAPPC1-203ENST00000571739 GIPC1O14908 333 aa8.69□□□□□ -1.02
TRAPPC1-203ENST00000571739 FANCGO15287 622 aa8.69□□□□□ -1.02
TRAPPC1-203ENST00000571739 PCDHGA12O60330 932 aa8.69□□□□□ -1.02
TRAPPC1-203ENST00000571739 DFNA5O60443 496 aa8.69□□□□□ -1.02
TRAPPC1-203ENST00000571739 MAGEC1O60732 1142 aa8.69□□□□□ -1.02
TRAPPC1-203ENST00000571739 CBFA2T3O75081 653 aa8.69□□□□□ -1.02
TRAPPC1-203ENST00000571739 NDST3O95803 873 aa8.69□□□□□ -1.02
TRAPPC1-203ENST00000571739 CER1O95813 267 aa8.69□□□□□ -1.02
TRAPPC1-203ENST00000571739 SOD1P00441 154 aa8.69□□□□□ -1.02
TRAPPC1-203ENST00000571739 FUCA1P04066 466 aa8.69□□□□□ -1.02
TRAPPC1-203ENST00000571739 PCCBP05166 539 aa8.69□□□□□ -1.02
TRAPPC1-203ENST00000571739 PIRTP0C851 137 aa8.69□□□□□ -1.02
TRAPPC1-203ENST00000571739 GIMD1P0DJR0 217 aa8.69□□□□□ -1.02
TRAPPC1-203ENST00000571739 ETS1P14921 441 aa8.69□□□□□ -1.02
TRAPPC1-203ENST00000571739 ZNF30P17039 623 aa8.69□□□□□ -1.02
TRAPPC1-203ENST00000571739 SDHBP21912 280 aa8.69□□□□□ -1.02
TRAPPC1-203ENST00000571739 PSMB4P28070 264 aa8.69□□□□□ -1.02
TRAPPC1-203ENST00000571739 ADRA1AP35348 466 aa8.69□□□□□ -1.02
TRAPPC1-203ENST00000571739 RABIFP47224 123 aa8.69□□□□□ -1.02
TRAPPC1-203ENST00000571739 KCNJ1P48048 391 aa8.69□□□□□ -1.02
TRAPPC1-203ENST00000571739 STC1P52823 247 aa8.69□□□□□ -1.02
TRAPPC1-203ENST00000571739 YPEL5P62699 121 aa8.69□□□□□ -1.02
TRAPPC1-203ENST00000571739 MPP3Q13368 585 aa8.69□□□□□ -1.02
TRAPPC1-203ENST00000571739 SNX1Q13596 522 aa8.69□□□□□ -1.02
TRAPPC1-203ENST00000571739 ARHGEF7Q14155 803 aa8.69□□□□□ -1.02
TRAPPC1-203ENST00000571739 PARP6Q2NL67 630 aa8.69□□□□□ -1.02
TRAPPC1-203ENST00000571739 SIRPB2Q5JXA9 342 aa8.69□□□□□ -1.02
TRAPPC1-203ENST00000571739 KCTD16Q68DU8 428 aa8.69□□□□□ -1.02
TRAPPC1-203ENST00000571739 KCTD11Q693B1 232 aa8.69□□□□□ -1.02
TRAPPC1-203ENST00000571739 PTAR1Q7Z6K3 402 aaPredicted RBP8.69□□□□□ -1.02
TRAPPC1-203ENST00000571739 NLRP8Q86W28 1048 aa8.69□□□□□ -1.02
TRAPPC1-203ENST00000571739 DCP2Q8IU60 420 aaKnown RBP8.69□□□□□ -1.02
TRAPPC1-203ENST00000571739 SLC25A45Q8N413 288 aa8.69□□□□□ -1.02
TRAPPC1-203ENST00000571739 SLC25A41Q8N5S1 370 aa8.69□□□□□ -1.02
TRAPPC1-203ENST00000571739 PRELID2Q8N945 189 aa8.69□□□□□ -1.02
TRAPPC1-203ENST00000571739 COG1Q8WTW3 980 aa8.69□□□□□ -1.02
TRAPPC1-203ENST00000571739 SCAMP4Q969E2 229 aa8.69□□□□□ -1.02
TRAPPC1-203ENST00000571739 RTP4Q96DX8 246 aa8.69□□□□□ -1.02
TRAPPC1-203ENST00000571739 DTD2Q96FN9 168 aa8.69□□□□□ -1.02
TRAPPC1-203ENST00000571739 PBKQ96KB5 322 aa8.69□□□□□ -1.02
TRAPPC1-203ENST00000571739 SPATA13Q96N96 652 aa8.69□□□□□ -1.02
TRAPPC1-203ENST00000571739 AGAP2Q99490 1192 aa8.69□□□□□ -1.02
TRAPPC1-203ENST00000571739 ADGRE3Q9BY15 652 aa8.69□□□□□ -1.02
TRAPPC1-203ENST00000571739 GBA3Q9H227 469 aa8.69□□□□□ -1.02
TRAPPC1-203ENST00000571739 MAGEE1Q9HCI5 957 aa8.69□□□□□ -1.02
TRAPPC1-203ENST00000571739 CD84Q9UIB8 345 aa8.69□□□□□ -1.02
TRAPPC1-203ENST00000571739 SHOC2Q9UQ13 582 aa8.69□□□□□ -1.02
TRAPPC1-203ENST00000571739 DRG1Q9Y295 367 aaKnown RBP8.69□□□□□ -1.02
TRAPPC1-203ENST00000571739 BTBD3Q9Y2F9 522 aa8.69□□□□□ -1.02
TRAPPC1-203ENST00000571739 OR1A2Q9Y585 309 aa8.69□□□□□ -1.02
TRAPPC1-203ENST00000571739 PCDHGB2Q9Y5G2 931 aa8.69□□□□□ -1.02
TRAPPC1-203ENST00000571739 SPO11Q9Y5K1 396 aa8.69□□□□□ -1.02
TRAPPC1-203ENST00000571739 TDRD6O60522 2096 aaKnown RBP8.68□□□□□ -1.02
TRAPPC1-203ENST00000571739 C1orf232A0A0U1RR37 186 aa8.68□□□□□ -1.02
TRAPPC1-203ENST00000571739 TOR1BO14657 336 aa8.68□□□□□ -1.02
TRAPPC1-203ENST00000571739 ZNF185O15231 689 aa8.68□□□□□ -1.02
TRAPPC1-203ENST00000571739 KIF5CO60282 957 aa8.68□□□□□ -1.02
TRAPPC1-203ENST00000571739 SDC3O75056 442 aa8.68□□□□□ -1.02
TRAPPC1-203ENST00000571739 KCNK5O95279 499 aa8.68□□□□□ -1.02
TRAPPC1-203ENST00000571739 CSF2P04141 144 aa8.68□□□□□ -1.02
TRAPPC1-203ENST00000571739 ITGAVP06756 1048 aa8.68□□□□□ -1.02
TRAPPC1-203ENST00000571739 HOXC4P09017 264 aaPredicted RBP8.68□□□□□ -1.02
TRAPPC1-203ENST00000571739 ZSCAN5DPP0CG00 497 aa8.68□□□□□ -1.02
TRAPPC1-203ENST00000571739 CSRP1P21291 193 aaKnown RBP8.68□□□□□ -1.02
TRAPPC1-203ENST00000571739 CA4P22748 312 aa8.68□□□□□ -1.02
TRAPPC1-203ENST00000571739 NFKBIAP25963 317 aa8.68□□□□□ -1.02
TRAPPC1-203ENST00000571739 SPINT3P49223 89 aa8.68□□□□□ -1.02
TRAPPC1-203ENST00000571739 DPTQ07507 201 aa8.68□□□□□ -1.02
TRAPPC1-203ENST00000571739 MTM1Q13496 603 aa8.68□□□□□ -1.02
TRAPPC1-203ENST00000571739 SPARCL1Q14515 664 aa8.68□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms