RNA–Protein interactions for RNA: ENST00000569971.5

UBR1-211, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

TSL 4

Gene UBR1, Length 721 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-211ENST00000569971 YWHAZP63104 245 aaKnown RBP3.86□□□□□ -1.79
UBR1-211ENST00000569971 LRMPQ12912 555 aa3.86□□□□□ -1.79
UBR1-211ENST00000569971 PGM5Q15124 567 aa3.86□□□□□ -1.79
UBR1-211ENST00000569971 SYTL3Q4VX76 610 aa3.86□□□□□ -1.79
UBR1-211ENST00000569971 FAM133BQ5BKY9 247 aaKnown RBP3.86□□□□□ -1.79
UBR1-211ENST00000569971 SPECC1Q5M775 1068 aa3.86□□□□□ -1.79
UBR1-211ENST00000569971 GKAP1Q5VSY0 366 aaPredicted RBP3.86□□□□□ -1.79
UBR1-211ENST00000569971 CPLX2Q6PUV4 134 aaKnown RBP3.86□□□□□ -1.79
UBR1-211ENST00000569971 TSSK4Q6SA08 328 aa3.86□□□□□ -1.79
UBR1-211ENST00000569971 CLEC17AQ6ZS10 378 aa3.86□□□□□ -1.79
UBR1-211ENST00000569971 ARHGEF25Q86VW2 580 aa3.86□□□□□ -1.79
UBR1-211ENST00000569971 WDR5BQ86VZ2 330 aa3.86□□□□□ -1.79
UBR1-211ENST00000569971 CCDC25Q86WR0 208 aa3.86□□□□□ -1.79
UBR1-211ENST00000569971 TDRPQ86YL5 185 aa3.86□□□□□ -1.79
UBR1-211ENST00000569971 ERC1Q8IUD2 1116 aa3.86□□□□□ -1.79
UBR1-211ENST00000569971 ARHGAP12Q8IWW6 846 aa3.86□□□□□ -1.79
UBR1-211ENST00000569971 DHX40Q8IX18 779 aaKnown RBP3.86□□□□□ -1.79
UBR1-211ENST00000569971 SCML4Q8N228 414 aa3.86□□□□□ -1.79
UBR1-211ENST00000569971 CCDC191Q8NCU4 936 aa3.86□□□□□ -1.79
UBR1-211ENST00000569971 RASSF8Q8NHQ8 419 aa3.86□□□□□ -1.79
UBR1-211ENST00000569971 ZNF398Q8TD17 642 aa3.86□□□□□ -1.79
UBR1-211ENST00000569971 HDAC7Q8WUI4 952 aa3.86□□□□□ -1.79
UBR1-211ENST00000569971 DNAAF4Q8WXU2 420 aa3.86□□□□□ -1.79
UBR1-211ENST00000569971 JAKMIP2Q96AA8 810 aa3.86□□□□□ -1.79
UBR1-211ENST00000569971 PABPC5Q96DU9 382 aaKnown RBP3.86□□□□□ -1.79
UBR1-211ENST00000569971 EFHD1Q9BUP0 239 aa3.86□□□□□ -1.79
UBR1-211ENST00000569971 AP1M1Q9BXS5 423 aa3.86□□□□□ -1.79
UBR1-211ENST00000569971 MAK16Q9BXY0 300 aaKnown RBP3.86□□□□□ -1.79
UBR1-211ENST00000569971 TXLNGYQ9BZA5 131 aa3.86□□□□□ -1.79
UBR1-211ENST00000569971 SH2D4AQ9H788 454 aa3.86□□□□□ -1.79
UBR1-211ENST00000569971 KIF9Q9HAQ2 790 aa3.86□□□□□ -1.79
UBR1-211ENST00000569971 PDE7BQ9NP56 450 aa3.86□□□□□ -1.79
UBR1-211ENST00000569971 ZCCHC17Q9NP64 241 aaKnown RBP3.86□□□□□ -1.79
UBR1-211ENST00000569971 HYPKQ9NX55 129 aa3.86□□□□□ -1.79
UBR1-211ENST00000569971 PLEKHB1Q9UF11 243 aaPredicted RBP3.86□□□□□ -1.79
UBR1-211ENST00000569971 CNOT8Q9UFF9 292 aaKnown RBP3.86□□□□□ -1.79
UBR1-211ENST00000569971 GIMAP2Q9UG22 337 aa3.86□□□□□ -1.79
UBR1-211ENST00000569971 DDX52Q9Y2R4 599 aaKnown RBP eCLIP3.86□□□□□ -1.79
UBR1-211ENST00000569971 CAMTA1Q9Y6Y1 1673 aa3.86□□□□□ -1.79
UBR1-211ENST00000569971 PASKQ96RG2 1323 aa3.86□□□□□ -1.79
UBR1-211ENST00000569971 PLEKHG2Q9H7P9 1386 aa3.86□□□□□ -1.79
UBR1-211ENST00000569971 TRPM3Q9HCF6 1732 aaPredicted RBP3.85□□□□□ -1.79
UBR1-211ENST00000569971 CBY3A6NI87 242 aa3.85□□□□□ -1.79
UBR1-211ENST00000569971 SH2B2O14492 632 aaPredicted RBP3.85□□□□□ -1.79
UBR1-211ENST00000569971 ENTPD3O75355 529 aa3.85□□□□□ -1.79
UBR1-211ENST00000569971 NEURL1O76050 574 aa3.85□□□□□ -1.79
UBR1-211ENST00000569971 WNT1P04628 370 aa3.85□□□□□ -1.79
UBR1-211ENST00000569971 PRR35P0CG20 571 aa3.85□□□□□ -1.79
UBR1-211ENST00000569971 NR2F1P10589 423 aa3.85□□□□□ -1.79
UBR1-211ENST00000569971 IRF1P10914 325 aa3.85□□□□□ -1.79
UBR1-211ENST00000569971 TFEBP19484 476 aa3.85□□□□□ -1.79
UBR1-211ENST00000569971 GPD1P21695 349 aa3.85□□□□□ -1.79
UBR1-211ENST00000569971 CHMLP26374 656 aa3.85□□□□□ -1.79
UBR1-211ENST00000569971 NNMTP40261 264 aa3.85□□□□□ -1.79
UBR1-211ENST00000569971 CLDN2P57739 230 aa3.85□□□□□ -1.79
UBR1-211ENST00000569971 SLC18A2Q05940 514 aa3.85□□□□□ -1.79
UBR1-211ENST00000569971 NIPAL4Q0D2K0 466 aa3.85□□□□□ -1.79
UBR1-211ENST00000569971 CSTF3Q12996 717 aaKnown RBP3.85□□□□□ -1.79
UBR1-211ENST00000569971 FGFBP1Q14512 234 aa3.85□□□□□ -1.79
UBR1-211ENST00000569971 HIST2H2ACQ16777 129 aaPredicted RBP3.85□□□□□ -1.79
UBR1-211ENST00000569971 ALG11Q2TAA5 492 aa3.85□□□□□ -1.79
UBR1-211ENST00000569971 CERKLQ49MI3 558 aaPredicted RBP3.85□□□□□ -1.79
UBR1-211ENST00000569971 TMEM119Q4V9L6 283 aa3.85□□□□□ -1.79
UBR1-211ENST00000569971 EARS2Q5JPH6 523 aaKnown RBP3.85□□□□□ -1.79
UBR1-211ENST00000569971 RAB41Q5JT25 222 aa3.85□□□□□ -1.79
UBR1-211ENST00000569971 PLEKHS1Q5SXH7 462 aa3.85□□□□□ -1.79
UBR1-211ENST00000569971 BEND3Q5T5X7 828 aa3.85□□□□□ -1.79
UBR1-211ENST00000569971 PRAMEF17Q5VTA0 474 aa3.85□□□□□ -1.79
UBR1-211ENST00000569971 SLC30A6Q6NXT4 461 aa3.85□□□□□ -1.79
UBR1-211ENST00000569971 FBXO42Q6P3S6 717 aa3.85□□□□□ -1.79
UBR1-211ENST00000569971 TMEM154Q6P9G4 183 aa3.85□□□□□ -1.79
UBR1-211ENST00000569971 SARM1Q6SZW1 724 aa3.85□□□□□ -1.79
UBR1-211ENST00000569971 CYB5R4Q7L1T6 521 aa3.85□□□□□ -1.79
UBR1-211ENST00000569971 PPP1R42Q7Z4L9 355 aa3.85□□□□□ -1.79
UBR1-211ENST00000569971 KRT77Q7Z794 578 aa3.85□□□□□ -1.79
UBR1-211ENST00000569971 KIAA2013Q8IYS2 634 aa3.85□□□□□ -1.79
UBR1-211ENST00000569971 CADM3Q8N126 398 aa3.85□□□□□ -1.79
UBR1-211ENST00000569971 PI4KAP1Q8N8J0 262 aa3.85□□□□□ -1.79
UBR1-211ENST00000569971 BOLLQ8N9W6 283 aaKnown RBP3.85□□□□□ -1.79
UBR1-211ENST00000569971 OR4N2Q8NGD1 307 aa3.85□□□□□ -1.79
UBR1-211ENST00000569971 NEK9Q8TD19 979 aa3.85□□□□□ -1.79
UBR1-211ENST00000569971 TMEM170AQ8WVE7 144 aa3.85□□□□□ -1.79
UBR1-211ENST00000569971 ANP32BQ92688 251 aaKnown RBP3.85□□□□□ -1.79
UBR1-211ENST00000569971 ATOH1Q92858 354 aaPredicted RBP3.85□□□□□ -1.79
UBR1-211ENST00000569971 MAP4K1Q92918 833 aa3.85□□□□□ -1.79
UBR1-211ENST00000569971 ZKSCAN4Q969J2 545 aaPredicted RBP3.85□□□□□ -1.79
UBR1-211ENST00000569971 LRRC59Q96AG4 307 aaKnown RBP3.85□□□□□ -1.79
UBR1-211ENST00000569971 MMABQ96EY8 250 aaPredicted RBP3.85□□□□□ -1.79
UBR1-211ENST00000569971 C1orf74Q96LT6 269 aa3.85□□□□□ -1.79
UBR1-211ENST00000569971 PLEKHA4Q9H4M7 779 aa3.85□□□□□ -1.79
UBR1-211ENST00000569971 ACTR5Q9H9F9 607 aaPredicted RBP3.85□□□□□ -1.79
UBR1-211ENST00000569971 MOV10Q9HCE1 1003 aaKnown RBP3.85□□□□□ -1.79
UBR1-211ENST00000569971 SLC6A13Q9NSD5 602 aa3.85□□□□□ -1.79
UBR1-211ENST00000569971 SPATS2LQ9NUQ6 558 aaKnown RBP3.85□□□□□ -1.79
UBR1-211ENST00000569971 BCCIPQ9P287 314 aaKnown RBP eCLIP3.85□□□□□ -1.79
UBR1-211ENST00000569971 SUCLA2Q9P2R7 463 aaPredicted RBP3.85□□□□□ -1.79
UBR1-211ENST00000569971 WNT6Q9Y6F9 365 aa3.85□□□□□ -1.79
UBR1-211ENST00000569971 TTC41PQ6P2S7 1318 aa3.85□□□□□ -1.79
UBR1-211ENST00000569971 DCCP43146 1447 aa3.85□□□□□ -1.79
UBR1-211ENST00000569971 C1orf167Q5SNV9 1468 aa3.85□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms