RNA–Protein interactions for RNA: ENST00000569801.5

SNX29-208, Transcript of sorting nexin 29, humanhuman

TSL 4

Gene SNX29, Length 540 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX29-208ENST00000569801 INSIG1O15503 277 aa8.33□□□□□ -1.08
SNX29-208ENST00000569801 FFAR2O15552 330 aa8.33□□□□□ -1.08
SNX29-208ENST00000569801 ATMINO43313 823 aaPredicted RBP8.33□□□□□ -1.08
SNX29-208ENST00000569801 RASA4O43374 803 aa8.33□□□□□ -1.08
SNX29-208ENST00000569801 TSPAN6O43657 245 aa8.33□□□□□ -1.08
SNX29-208ENST00000569801 ZG16O60844 167 aa8.33□□□□□ -1.08
SNX29-208ENST00000569801 PIAS2O75928 621 aa8.33□□□□□ -1.08
SNX29-208ENST00000569801 POP4O95707 220 aaKnown RBP8.33□□□□□ -1.08
SNX29-208ENST00000569801 IGSF6O95976 241 aa8.33□□□□□ -1.08
SNX29-208ENST00000569801 CCDC172P0C7W6 258 aa8.33□□□□□ -1.08
SNX29-208ENST00000569801 ITIH2P19823 946 aa8.33□□□□□ -1.08
SNX29-208ENST00000569801 TNFAIP3P21580 790 aa8.33□□□□□ -1.08
SNX29-208ENST00000569801 AIF1P55008 147 aa8.33□□□□□ -1.08
SNX29-208ENST00000569801 YBEYP58557 167 aaPredicted RBP8.33□□□□□ -1.08
SNX29-208ENST00000569801 MAMLD1Q13495 774 aa8.33□□□□□ -1.08
SNX29-208ENST00000569801 FZD2Q14332 565 aa8.33□□□□□ -1.08
SNX29-208ENST00000569801 ASIC2Q16515 512 aa8.33□□□□□ -1.08
SNX29-208ENST00000569801 CA9Q16790 459 aa8.33□□□□□ -1.08
SNX29-208ENST00000569801 PARP15Q460N3 678 aa8.33□□□□□ -1.08
SNX29-208ENST00000569801 ZNF542PQ5EBM4 170 aa8.33□□□□□ -1.08
SNX29-208ENST00000569801 PLEKHA7Q6IQ23 1121 aa8.33□□□□□ -1.08
SNX29-208ENST00000569801 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP8.33□□□□□ -1.08
SNX29-208ENST00000569801 GDPD4Q6W3E5 623 aa8.33□□□□□ -1.08
SNX29-208ENST00000569801 TMC6Q7Z403 805 aa8.33□□□□□ -1.08
SNX29-208ENST00000569801 TMPRSS9Q7Z410 1059 aa8.33□□□□□ -1.08
SNX29-208ENST00000569801 COL27A1Q8IZC6 1860 aaPredicted RBP8.33□□□□□ -1.08
SNX29-208ENST00000569801 UMODL1-AS1Q8N2C9 162 aa8.33□□□□□ -1.08
SNX29-208ENST00000569801 ARFGAP1Q8N6T3 406 aa8.33□□□□□ -1.08
SNX29-208ENST00000569801 OR4C6Q8NH72 309 aa8.33□□□□□ -1.08
SNX29-208ENST00000569801 CASKIN2Q8WXE0 1202 aa8.33□□□□□ -1.08
SNX29-208ENST00000569801 EXOC2Q96KP1 924 aa8.33□□□□□ -1.08
SNX29-208ENST00000569801 GDAP1L1Q96MZ0 367 aa8.33□□□□□ -1.08
SNX29-208ENST00000569801 PEBP4Q96S96 227 aa8.33□□□□□ -1.08
SNX29-208ENST00000569801 OSBPL1AQ9BXW6 950 aa8.33□□□□□ -1.08
SNX29-208ENST00000569801 TTYH3Q9C0H2 523 aa8.33□□□□□ -1.08
SNX29-208ENST00000569801 NAT10Q9H0A0 1025 aaKnown RBP8.33□□□□□ -1.08
SNX29-208ENST00000569801 CXXC4Q9H2H0 198 aa8.33□□□□□ -1.08
SNX29-208ENST00000569801 LRRC19Q9H756 370 aa8.33□□□□□ -1.08
SNX29-208ENST00000569801 CATSPERBQ9H7T0 1116 aa8.33□□□□□ -1.08
SNX29-208ENST00000569801 PDFQ9HBH1 243 aa8.33□□□□□ -1.08
SNX29-208ENST00000569801 GPATCH2LQ9NWQ4 482 aa8.33□□□□□ -1.08
SNX29-208ENST00000569801 LHX3Q9UBR4 397 aa8.33□□□□□ -1.08
SNX29-208ENST00000569801 KLF15Q9UIH9 416 aa8.33□□□□□ -1.08
SNX29-208ENST00000569801 MYO6Q9UM54 1294 aa8.33□□□□□ -1.08
SNX29-208ENST00000569801 PCDHB11Q9Y5F2 797 aa8.33□□□□□ -1.08
SNX29-208ENST00000569801 ABCA4P78363 2273 aa8.32□□□□□ -1.08
SNX29-208ENST00000569801 LY6G6EA0A0G2JKS1 128 aa8.32□□□□□ -1.08
SNX29-208ENST00000569801 A0A1B0GTH6 734 aa8.32□□□□□ -1.08
SNX29-208ENST00000569801 DDX3XO00571 662 aaKnown RBP eCLIP8.32□□□□□ -1.08
SNX29-208ENST00000569801 FPGTO14772 594 aa8.32□□□□□ -1.08
SNX29-208ENST00000569801 FGF10O15520 208 aaPredicted RBP8.32□□□□□ -1.08
SNX29-208ENST00000569801 NEBLO76041 1014 aa8.32□□□□□ -1.08
SNX29-208ENST00000569801 HEXAP06865 529 aa8.32□□□□□ -1.08
SNX29-208ENST00000569801 NME1P15531 152 aaKnown RBP8.32□□□□□ -1.08
SNX29-208ENST00000569801 PSMA2P25787 234 aa8.32□□□□□ -1.08
SNX29-208ENST00000569801 IGFALSP35858 605 aa8.32□□□□□ -1.08
SNX29-208ENST00000569801 PRKCIP41743 596 aa8.32□□□□□ -1.08
SNX29-208ENST00000569801 RABIFP47224 123 aa8.32□□□□□ -1.08
SNX29-208ENST00000569801 TPI1P60174 286 aa8.32□□□□□ -1.08
SNX29-208ENST00000569801 PFN3P60673 137 aa8.32□□□□□ -1.08
SNX29-208ENST00000569801 RHOAP61586 193 aa8.32□□□□□ -1.08
SNX29-208ENST00000569801 SGCGQ13326 291 aa8.32□□□□□ -1.08
SNX29-208ENST00000569801 PDE1CQ14123 709 aaPredicted RBP8.32□□□□□ -1.08
SNX29-208ENST00000569801 NR6A1Q15406 480 aa8.32□□□□□ -1.08
SNX29-208ENST00000569801 CYTH1Q15438 398 aa8.32□□□□□ -1.08
SNX29-208ENST00000569801 INO80DQ53TQ3 878 aaPredicted RBP8.32□□□□□ -1.08
SNX29-208ENST00000569801 TCTN3Q6NUS6 607 aa8.32□□□□□ -1.08
SNX29-208ENST00000569801 CAVIN1Q6NZI2 390 aaKnown RBP8.32□□□□□ -1.08
SNX29-208ENST00000569801 CYP4V2Q6ZWL3 525 aaPredicted RBP8.32□□□□□ -1.08
SNX29-208ENST00000569801 ZNF571Q7Z3V5 609 aaPredicted RBP8.32□□□□□ -1.08
SNX29-208ENST00000569801 ZSCAN30Q86W11 494 aa8.32□□□□□ -1.08
SNX29-208ENST00000569801 PARGQ86W56 976 aa8.32□□□□□ -1.08
SNX29-208ENST00000569801 ZFAND4Q86XD8 727 aa8.32□□□□□ -1.08
SNX29-208ENST00000569801 DCP2Q8IU60 420 aaKnown RBP8.32□□□□□ -1.08
SNX29-208ENST00000569801 DENND6BQ8NEG7 585 aa8.32□□□□□ -1.08
SNX29-208ENST00000569801 DNAJB8Q8NHS0 232 aa8.32□□□□□ -1.08
SNX29-208ENST00000569801 APOBEC4Q8WW27 367 aaKnown RBP8.32□□□□□ -1.08
SNX29-208ENST00000569801 ASB12Q8WXK4 309 aa8.32□□□□□ -1.08
SNX29-208ENST00000569801 IFT43Q96FT9 208 aa8.32□□□□□ -1.08
SNX29-208ENST00000569801 APOLD1Q96LR9 279 aa8.32□□□□□ -1.08
SNX29-208ENST00000569801 NAP1L5Q96NT1 182 aaPredicted RBP8.32□□□□□ -1.08
SNX29-208ENST00000569801 LENG8Q96PV6 779 aaPredicted RBP8.32□□□□□ -1.08
SNX29-208ENST00000569801 KCTD15Q96SI1 283 aaPredicted RBP8.32□□□□□ -1.08
SNX29-208ENST00000569801 HAUS4Q9H6D7 363 aa8.32□□□□□ -1.08
SNX29-208ENST00000569801 PARVAQ9NVD7 372 aa8.32□□□□□ -1.08
SNX29-208ENST00000569801 DNAJC28Q9NX36 388 aa8.32□□□□□ -1.08
SNX29-208ENST00000569801 NLGN3Q9NZ94 848 aa8.32□□□□□ -1.08
SNX29-208ENST00000569801 MAP10Q9P2G4 905 aa8.32□□□□□ -1.08
SNX29-208ENST00000569801 UBA2Q9UBT2 640 aaPredicted RBP8.32□□□□□ -1.08
SNX29-208ENST00000569801 AP4E1Q9UPM8 1137 aa8.32□□□□□ -1.08
SNX29-208ENST00000569801 MFHAS1Q9Y4C4 1052 aa8.32□□□□□ -1.08
SNX29-208ENST00000569801 U3KQA8 63 aa8.32□□□□□ -1.08
SNX29-208ENST00000569801 SHANK1Q9Y566 2161 aa8.31□□□□□ -1.08
SNX29-208ENST00000569801 LRP4O75096 1905 aa8.31□□□□□ -1.08
SNX29-208ENST00000569801 SPTY2D1-AS1A0A0U1RR47 76 aa8.31□□□□□ -1.08
SNX29-208ENST00000569801 A0A1W2PQC6 194 aa8.31□□□□□ -1.08
SNX29-208ENST00000569801 TSPAN11A1L157 253 aa8.31□□□□□ -1.08
SNX29-208ENST00000569801 TMEM191CA6NGB0 347 aa8.31□□□□□ -1.08
SNX29-208ENST00000569801 J3KR12 359 aa8.31□□□□□ -1.08
SNX29-208ENST00000569801 K7ESM1 405 aa8.31□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms