RNA–Protein interactions for RNA: ENST00000569240.5

CNOT1-216, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CNOT1, Length 7,660 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-216ENST00000569240 PHF10Q8WUB8 498 aaKnown RBP7.12□□□□□ -1.27
CNOT1-216ENST00000569240 BTN2A2Q8WVV5 523 aa7.12□□□□□ -1.27
CNOT1-216ENST00000569240 PRICKLE1Q96MT3 831 aaPredicted RBP7.12□□□□□ -1.27
CNOT1-216ENST00000569240 ACTR8Q9H981 624 aa7.12□□□□□ -1.27
CNOT1-216ENST00000569240 RAD18Q9NS91 495 aa7.12□□□□□ -1.27
CNOT1-216ENST00000569240 RCCD1A6NED2 376 aa7.12□□□□□ -1.27
CNOT1-216ENST00000569240 USP17L10C9JJH3 530 aa7.12□□□□□ -1.27
CNOT1-216ENST00000569240 KCNA6P17658 529 aa7.12□□□□□ -1.27
CNOT1-216ENST00000569240 SLC16A2P36021 539 aa7.12□□□□□ -1.27
CNOT1-216ENST00000569240 NUDT1P36639 197 aa7.12□□□□□ -1.27
CNOT1-216ENST00000569240 GMPSP49915 693 aaPredicted RBP7.12□□□□□ -1.27
CNOT1-216ENST00000569240 RPS7P62081 194 aaKnown RBP7.12□□□□□ -1.27
CNOT1-216ENST00000569240 SLC1A5Q15758 541 aa7.12□□□□□ -1.27
CNOT1-216ENST00000569240 PLA2G4EQ3MJ16 856 aa7.12□□□□□ -1.27
CNOT1-216ENST00000569240 VANGL1Q8TAA9 524 aaPredicted RBP7.12□□□□□ -1.27
CNOT1-216ENST00000569240 CHPT1Q8WUD6 406 aa7.12□□□□□ -1.27
CNOT1-216ENST00000569240 C7orf43Q8WVR3 580 aa7.12□□□□□ -1.27
CNOT1-216ENST00000569240 DNAJB3Q8WWF6 145 aa7.12□□□□□ -1.27
CNOT1-216ENST00000569240 RAVER2Q9HCJ3 691 aaKnown RBP7.12□□□□□ -1.27
CNOT1-216ENST00000569240 GRHL1Q9NZI5 618 aa7.12□□□□□ -1.27
CNOT1-216ENST00000569240 GINS2Q9Y248 185 aa7.12□□□□□ -1.27
CNOT1-216ENST00000569240 NCKAP1Q9Y2A7 1128 aa7.12□□□□□ -1.27
CNOT1-216ENST00000569240 PCDHGB3Q9Y5G1 929 aa7.12□□□□□ -1.27
CNOT1-216ENST00000569240 QSOX1O00391 747 aa7.12□□□□□ -1.27
CNOT1-216ENST00000569240 SERPINB7O75635 380 aa7.12□□□□□ -1.27
CNOT1-216ENST00000569240 ZNF7P17097 686 aaPredicted RBP7.12□□□□□ -1.27
CNOT1-216ENST00000569240 DLG2Q15700 870 aa7.12□□□□□ -1.27
CNOT1-216ENST00000569240 HGSNATQ68CP4 663 aa7.12□□□□□ -1.27
CNOT1-216ENST00000569240 GLYATQ6IB77 296 aa7.12□□□□□ -1.27
CNOT1-216ENST00000569240 PNCKQ6P2M8 343 aa7.12□□□□□ -1.27
CNOT1-216ENST00000569240 TIFABQ6ZNK6 161 aa7.12□□□□□ -1.27
CNOT1-216ENST00000569240 FAM220AQ7Z4H9 259 aa7.12□□□□□ -1.27
CNOT1-216ENST00000569240 MILR1Q7Z6M3 343 aa7.12□□□□□ -1.27
CNOT1-216ENST00000569240 IZUMO1Q8IYV9 350 aa7.12□□□□□ -1.27
CNOT1-216ENST00000569240 NATD1Q8N6N6 113 aa7.12□□□□□ -1.27
CNOT1-216ENST00000569240 SAE1Q9UBE0 346 aaPredicted RBP7.12□□□□□ -1.27
CNOT1-216ENST00000569240 MALT1Q9UDY8 824 aa7.12□□□□□ -1.27
CNOT1-216ENST00000569240 TMEM5Q9Y2B1 443 aa7.12□□□□□ -1.27
CNOT1-216ENST00000569240 CSADQ9Y600 493 aa7.12□□□□□ -1.27
CNOT1-216ENST00000569240 MYPNQ86TC9 1320 aa7.12□□□□□ -1.27
CNOT1-216ENST00000569240 HECW2Q9P2P5 1572 aa7.12□□□□□ -1.27
CNOT1-216ENST00000569240 FADS2O95864 444 aaKnown RBP7.12□□□□□ -1.27
CNOT1-216ENST00000569240 CYP11A1P05108 521 aa7.12□□□□□ -1.27
CNOT1-216ENST00000569240 BMP6P22004 513 aa7.12□□□□□ -1.27
CNOT1-216ENST00000569240 SOAT1P35610 550 aa7.12□□□□□ -1.27
CNOT1-216ENST00000569240 PPATQ06203 517 aa7.12□□□□□ -1.27
CNOT1-216ENST00000569240 BNIP3Q12983 259 aa7.12□□□□□ -1.27
CNOT1-216ENST00000569240 IL18Q14116 193 aa7.12□□□□□ -1.27
CNOT1-216ENST00000569240 COQ5Q5HYK3 327 aa7.12□□□□□ -1.27
CNOT1-216ENST00000569240 RNF219Q5W0B1 726 aaPredicted RBP7.12□□□□□ -1.27
CNOT1-216ENST00000569240 NEPROQ6NW34 567 aa7.12□□□□□ -1.27
CNOT1-216ENST00000569240 MACC1Q6ZN28 852 aa7.12□□□□□ -1.27
CNOT1-216ENST00000569240 DDX51Q8N8A6 666 aaKnown RBP eCLIP7.12□□□□□ -1.27
CNOT1-216ENST00000569240 SGCDQ92629 289 aa7.12□□□□□ -1.27
CNOT1-216ENST00000569240 HOXC10Q9NYD6 342 aa7.12□□□□□ -1.27
CNOT1-216ENST00000569240 MAT2BQ9NZL9 334 aa7.12□□□□□ -1.27
CNOT1-216ENST00000569240 QRICH2Q9H0J4 1663 aa7.12□□□□□ -1.27
CNOT1-216ENST00000569240 FGF10O15520 208 aaPredicted RBP7.12□□□□□ -1.27
CNOT1-216ENST00000569240 SGTAO43765 313 aa7.12□□□□□ -1.27
CNOT1-216ENST00000569240 CDC40O60508 579 aaKnown RBP eCLIP7.12□□□□□ -1.27
CNOT1-216ENST00000569240 HCN1O60741 890 aa7.12□□□□□ -1.27
CNOT1-216ENST00000569240 OR2B3O76000 313 aa7.12□□□□□ -1.27
CNOT1-216ENST00000569240 CYP2A7P20853 494 aa7.12□□□□□ -1.27
CNOT1-216ENST00000569240 HUNKP57058 714 aa7.12□□□□□ -1.27
CNOT1-216ENST00000569240 GRIK2Q13002 908 aa7.12□□□□□ -1.27
CNOT1-216ENST00000569240 BRMS1LQ5PSV4 323 aa7.12□□□□□ -1.27
CNOT1-216ENST00000569240 AFTPHQ6ULP2 937 aa7.12□□□□□ -1.27
CNOT1-216ENST00000569240 SERPINB11Q96P15 392 aa7.12□□□□□ -1.27
CNOT1-216ENST00000569240 FAM83DQ9H4H8 585 aa7.12□□□□□ -1.27
CNOT1-216ENST00000569240 H0YGN5 161 aa7.11□□□□□ -1.27
CNOT1-216ENST00000569240 PCDHGA12O60330 932 aa7.11□□□□□ -1.27
CNOT1-216ENST00000569240 PLA2G6O60733 806 aa7.11□□□□□ -1.27
CNOT1-216ENST00000569240 TIPRLO75663 272 aa7.11□□□□□ -1.27
CNOT1-216ENST00000569240 ETV6P41212 452 aa7.11□□□□□ -1.27
CNOT1-216ENST00000569240 SLC18A2Q05940 514 aa7.11□□□□□ -1.27
CNOT1-216ENST00000569240 PTPN11Q06124 597 aaPredicted RBP7.11□□□□□ -1.27
CNOT1-216ENST00000569240 DCAF6Q58WW2 860 aa7.11□□□□□ -1.27
CNOT1-216ENST00000569240 GNASQ5JWF2 1037 aa7.11□□□□□ -1.27
CNOT1-216ENST00000569240 CYB5RLQ6IPT4 315 aa7.11□□□□□ -1.27
CNOT1-216ENST00000569240 DEF8Q6ZN54 512 aa7.11□□□□□ -1.27
CNOT1-216ENST00000569240 FAM109AQ8N4B1 249 aa7.11□□□□□ -1.27
CNOT1-216ENST00000569240 DYNLL2Q96FJ2 89 aa7.11□□□□□ -1.27
CNOT1-216ENST00000569240 ZSWIM3Q96MP5 696 aa7.11□□□□□ -1.27
CNOT1-216ENST00000569240 CUEDC1Q9NWM3 386 aaPredicted RBP7.11□□□□□ -1.27
CNOT1-216ENST00000569240 SNX8Q9Y5X2 465 aa7.11□□□□□ -1.27
CNOT1-216ENST00000569240 NFS1Q9Y697 457 aa7.11□□□□□ -1.27
CNOT1-216ENST00000569240 AP1M2Q9Y6Q5 423 aa7.11□□□□□ -1.27
CNOT1-216ENST00000569240 LMTK2Q8IWU2 1503 aa7.11□□□□□ -1.27
CNOT1-216ENST00000569240 ELOVL7A1L3X0 281 aa7.11□□□□□ -1.27
CNOT1-216ENST00000569240 L7N2F9 121 aa7.11□□□□□ -1.27
CNOT1-216ENST00000569240 TFRCP02786 760 aaKnown RBP7.11□□□□□ -1.27
CNOT1-216ENST00000569240 RPS5P46782 204 aaKnown RBP7.11□□□□□ -1.27
CNOT1-216ENST00000569240 PRMT2P55345 433 aa7.11□□□□□ -1.27
CNOT1-216ENST00000569240 ADAM15Q13444 863 aa7.11□□□□□ -1.27
CNOT1-216ENST00000569240 TGFBIQ15582 683 aa7.11□□□□□ -1.27
CNOT1-216ENST00000569240 NFE2Q16621 373 aaPredicted RBP7.11□□□□□ -1.27
CNOT1-216ENST00000569240 Q6ZNX1 250 aa7.11□□□□□ -1.27
CNOT1-216ENST00000569240 ZNF655Q8N720 491 aaPredicted RBP7.11□□□□□ -1.27
CNOT1-216ENST00000569240 CDK5RAP1Q96SZ6 601 aaKnown RBP7.11□□□□□ -1.27
CNOT1-216ENST00000569240 PELOQ9BRX2 385 aaKnown RBP7.11□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms