RNA–Protein interactions for RNA: ENST00000568770.5

CDH13-211, Transcript of cadherin 13, humanhuman

TSL 4

Gene CDH13, Length 589 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13-211ENST00000568770 TBC1D3LB9A6J9 549 aa5.8□□□□□ -1.48
CDH13-211ENST00000568770 EIF3DO15371 548 aaKnown RBP eCLIP5.8□□□□□ -1.48
CDH13-211ENST00000568770 GPR39O43194 453 aa5.8□□□□□ -1.48
CDH13-211ENST00000568770 STX6O43752 255 aa5.8□□□□□ -1.48
CDH13-211ENST00000568770 RNASEH1O60930 286 aaKnown RBP5.8□□□□□ -1.48
CDH13-211ENST00000568770 CSO75390 466 aaKnown RBP5.8□□□□□ -1.48
CDH13-211ENST00000568770 TBC1D3HP0C7X1 549 aa5.8□□□□□ -1.48
CDH13-211ENST00000568770 P4HA1P13674 534 aa5.8□□□□□ -1.48
CDH13-211ENST00000568770 POLR2EP19388 210 aaKnown RBP5.8□□□□□ -1.48
CDH13-211ENST00000568770 CDK11BP21127 795 aaKnown RBP5.8□□□□□ -1.48
CDH13-211ENST00000568770 SLC8A1P32418 973 aa5.8□□□□□ -1.48
CDH13-211ENST00000568770 CD70P32970 193 aa5.8□□□□□ -1.48
CDH13-211ENST00000568770 CCR5P51681 352 aa5.8□□□□□ -1.48
CDH13-211ENST00000568770 ADPRHP54922 357 aa5.8□□□□□ -1.48
CDH13-211ENST00000568770 TMPRSS15P98073 1019 aa5.8□□□□□ -1.48
CDH13-211ENST00000568770 SGSM1Q2NKQ1 1148 aa5.8□□□□□ -1.48
CDH13-211ENST00000568770 HNRNPA1L2Q32P51 320 aaKnown RBP5.8□□□□□ -1.48
CDH13-211ENST00000568770 TBC1D3GQ6DHY5 549 aa5.8□□□□□ -1.48
CDH13-211ENST00000568770 TBC1D3CQ6IPX1 549 aa5.8□□□□□ -1.48
CDH13-211ENST00000568770 SPOPLQ6IQ16 392 aa5.8□□□□□ -1.48
CDH13-211ENST00000568770 C1QL4Q86Z23 238 aa5.8□□□□□ -1.48
CDH13-211ENST00000568770 MMAAQ8IVH4 418 aaKnown RBP5.8□□□□□ -1.48
CDH13-211ENST00000568770 NELFCDQ8IXH7 590 aa5.8□□□□□ -1.48
CDH13-211ENST00000568770 CMIPQ8IY22 773 aa5.8□□□□□ -1.48
CDH13-211ENST00000568770 TBC1D3Q8IZP1 549 aaPredicted RBP5.8□□□□□ -1.48
CDH13-211ENST00000568770 AADATQ8N5Z0 425 aa5.8□□□□□ -1.48
CDH13-211ENST00000568770 PDILTQ8N807 584 aa5.8□□□□□ -1.48
CDH13-211ENST00000568770 DDX51Q8N8A6 666 aaKnown RBP eCLIP5.8□□□□□ -1.48
CDH13-211ENST00000568770 CLRN3Q8NCR9 226 aa5.8□□□□□ -1.48
CDH13-211ENST00000568770 OR14C36Q8NHC7 312 aa5.8□□□□□ -1.48
CDH13-211ENST00000568770 WFDC5Q8TCV5 224 aa5.8□□□□□ -1.48
CDH13-211ENST00000568770 TMA16Q96EY4 203 aaKnown RBP5.8□□□□□ -1.48
CDH13-211ENST00000568770 VCPIP1Q96JH7 1222 aa5.8□□□□□ -1.48
CDH13-211ENST00000568770 KRTAP4-8Q9BYQ9 185 aa5.8□□□□□ -1.48
CDH13-211ENST00000568770 TRIM8Q9BZR9 551 aa5.8□□□□□ -1.48
CDH13-211ENST00000568770 PCDH18Q9HCL0 1135 aa5.8□□□□□ -1.48
CDH13-211ENST00000568770 THSD1Q9NS62 852 aa5.8□□□□□ -1.48
CDH13-211ENST00000568770 KCND1Q9NSA2 647 aa5.8□□□□□ -1.48
CDH13-211ENST00000568770 FZD4Q9ULV1 537 aa5.8□□□□□ -1.48
CDH13-211ENST00000568770 SATB2Q9UPW6 733 aa5.8□□□□□ -1.48
CDH13-211ENST00000568770 SRPRBQ9Y5M8 271 aaKnown RBP5.8□□□□□ -1.48
CDH13-211ENST00000568770 CELSR2Q9HCU4 2923 aa5.8□□□□□ -1.48
CDH13-211ENST00000568770 ZFC3H1O60293 1989 aaKnown RBP5.8□□□□□ -1.48
CDH13-211ENST00000568770 A0A1B0GVM2 712 aa5.79□□□□□ -1.48
CDH13-211ENST00000568770 A0A1W2PNU3 283 aaPredicted RBP5.79□□□□□ -1.48
CDH13-211ENST00000568770 TTC34A8MYJ7 566 aa5.79□□□□□ -1.48
CDH13-211ENST00000568770 DDX3XO00571 662 aaKnown RBP eCLIP5.79□□□□□ -1.48
CDH13-211ENST00000568770 FFAR2O15552 330 aa5.79□□□□□ -1.48
CDH13-211ENST00000568770 LATO43561 262 aa5.79□□□□□ -1.48
CDH13-211ENST00000568770 NUAK1O60285 661 aa5.79□□□□□ -1.48
CDH13-211ENST00000568770 EXOC3O60645 756 aa5.79□□□□□ -1.48
CDH13-211ENST00000568770 MAGEC1O60732 1142 aa5.79□□□□□ -1.48
CDH13-211ENST00000568770 EIF5BO60841 1220 aaKnown RBP5.79□□□□□ -1.48
CDH13-211ENST00000568770 ASS1P00966 412 aaKnown RBP5.79□□□□□ -1.48
CDH13-211ENST00000568770 CKMT1AP12532 417 aa5.79□□□□□ -1.48
CDH13-211ENST00000568770 MYF5P13349 255 aa5.79□□□□□ -1.48
CDH13-211ENST00000568770 GOT1P17174 413 aa5.79□□□□□ -1.48
CDH13-211ENST00000568770 TRIM21P19474 475 aaKnown RBP5.79□□□□□ -1.48
CDH13-211ENST00000568770 DGKAP23743 735 aa5.79□□□□□ -1.48
CDH13-211ENST00000568770 MAT2AP31153 395 aaKnown RBP5.79□□□□□ -1.48
CDH13-211ENST00000568770 PSMD8P48556 350 aa5.79□□□□□ -1.48
CDH13-211ENST00000568770 HARS2P49590 506 aaKnown RBP5.79□□□□□ -1.48
CDH13-211ENST00000568770 AP3M2P53677 418 aa5.79□□□□□ -1.48
CDH13-211ENST00000568770 ST8SIA6P61647 398 aa5.79□□□□□ -1.48
CDH13-211ENST00000568770 YWHAGP61981 247 aaKnown RBP eCLIP5.79□□□□□ -1.48
CDH13-211ENST00000568770 PPP2CBP62714 309 aa5.79□□□□□ -1.48
CDH13-211ENST00000568770 PPP2CAP67775 309 aa5.79□□□□□ -1.48
CDH13-211ENST00000568770 IL13RA1P78552 427 aa5.79□□□□□ -1.48
CDH13-211ENST00000568770 ALDH6A1Q02252 535 aaKnown RBP5.79□□□□□ -1.48
CDH13-211ENST00000568770 CEBPZQ03701 1054 aaKnown RBP5.79□□□□□ -1.48
CDH13-211ENST00000568770 INCA1Q0VD86 236 aa5.79□□□□□ -1.48
CDH13-211ENST00000568770 HS1BP3Q53T59 392 aa5.79□□□□□ -1.48
CDH13-211ENST00000568770 C3orf38Q5JPI3 329 aa5.79□□□□□ -1.48
CDH13-211ENST00000568770 C9orf64Q5T6V5 341 aa5.79□□□□□ -1.48
CDH13-211ENST00000568770 NAPEPLDQ6IQ20 393 aa5.79□□□□□ -1.48
CDH13-211ENST00000568770 ARHGAP18Q8N392 663 aa5.79□□□□□ -1.48
CDH13-211ENST00000568770 EXD3Q8N9H8 876 aa5.79□□□□□ -1.48
CDH13-211ENST00000568770 PARD3BQ8TEW8 1205 aa5.79□□□□□ -1.48
CDH13-211ENST00000568770 NDRG1Q92597 394 aaKnown RBP5.79□□□□□ -1.48
CDH13-211ENST00000568770 SLC46A1Q96NT5 459 aa5.79□□□□□ -1.48
CDH13-211ENST00000568770 DUSP16Q9BY84 665 aa5.79□□□□□ -1.48
CDH13-211ENST00000568770 ABCG4Q9H172 646 aa5.79□□□□□ -1.48
CDH13-211ENST00000568770 STOML2Q9UJZ1 356 aa5.79□□□□□ -1.48
CDH13-211ENST00000568770 NBASA2RRP1 2371 aa5.79□□□□□ -1.48
CDH13-211ENST00000568770 UBE4BO95155 1302 aa5.78□□□□□ -1.48
CDH13-211ENST00000568770 LY6G6EA0A0G2JKS1 128 aa5.78□□□□□ -1.48
CDH13-211ENST00000568770 GOLGA6L7A0A1B0GV03 622 aa5.78□□□□□ -1.48
CDH13-211ENST00000568770 TARSL2A2RTX5 802 aaKnown RBP5.78□□□□□ -1.48
CDH13-211ENST00000568770 PMS2P1A4D2B8 440 aa5.78□□□□□ -1.48
CDH13-211ENST00000568770 SH3D21A4FU49 640 aa5.78□□□□□ -1.48
CDH13-211ENST00000568770 MSI1O43347 362 aaKnown RBP5.78□□□□□ -1.48
CDH13-211ENST00000568770 SUV39H1O43463 412 aa5.78□□□□□ -1.48
CDH13-211ENST00000568770 TBL1XO60907 577 aa5.78□□□□□ -1.48
CDH13-211ENST00000568770 PRKD3O94806 890 aa5.78□□□□□ -1.48
CDH13-211ENST00000568770 ZBED1O96006 694 aa5.78□□□□□ -1.48
CDH13-211ENST00000568770 KNG1P01042 644 aa5.78□□□□□ -1.48
CDH13-211ENST00000568770 PRLP01236 227 aa5.78□□□□□ -1.48
CDH13-211ENST00000568770 IL1BP01584 269 aa5.78□□□□□ -1.48
CDH13-211ENST00000568770 RPN1P04843 607 aaKnown RBP5.78□□□□□ -1.48
CDH13-211ENST00000568770 CENPBP07199 599 aaPredicted RBP5.78□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms