RNA–Protein interactions for RNA: ENST00000568569.1

GTF3C1-209, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 5

Gene GTF3C1, Length 540 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-209ENST00000568569 NKAIN2Q5VXU1 208 aa11.81□□□□□ -0.52
GTF3C1-209ENST00000568569 ANKS6Q68DC2 871 aa11.81□□□□□ -0.52
GTF3C1-209ENST00000568569 DPY19L2P1Q6NXN4 242 aa11.81□□□□□ -0.52
GTF3C1-209ENST00000568569 SLC30A9Q6PML9 568 aa11.81□□□□□ -0.52
GTF3C1-209ENST00000568569 DPPA4Q7L190 304 aa11.81□□□□□ -0.52
GTF3C1-209ENST00000568569 PHLDB2Q86SQ0 1253 aa11.81□□□□□ -0.52
GTF3C1-209ENST00000568569 ZNF677Q86XU0 584 aa11.81□□□□□ -0.52
GTF3C1-209ENST00000568569 NRSN1Q8IZ57 195 aa11.81□□□□□ -0.52
GTF3C1-209ENST00000568569 NLGN4XQ8N0W4 816 aa11.81□□□□□ -0.52
GTF3C1-209ENST00000568569 UMODL1-AS1Q8N2C9 162 aa11.81□□□□□ -0.52
GTF3C1-209ENST00000568569 PYROXD2Q8N2H3 581 aa11.81□□□□□ -0.52
GTF3C1-209ENST00000568569 PAF1Q8N7H5 531 aa11.81□□□□□ -0.52
GTF3C1-209ENST00000568569 NLGN4YQ8NFZ3 816 aaPredicted RBP11.81□□□□□ -0.52
GTF3C1-209ENST00000568569 JOSD2Q8TAC2 188 aa11.81□□□□□ -0.52
GTF3C1-209ENST00000568569 PATE1Q8WXA2 126 aa11.81□□□□□ -0.52
GTF3C1-209ENST00000568569 MIB2Q96AX9 1013 aa11.81□□□□□ -0.52
GTF3C1-209ENST00000568569 ECHDC3Q96DC8 303 aa11.81□□□□□ -0.52
GTF3C1-209ENST00000568569 ABHD17AQ96GS6 310 aa11.81□□□□□ -0.52
GTF3C1-209ENST00000568569 NDST4Q9H3R1 872 aa11.81□□□□□ -0.52
GTF3C1-209ENST00000568569 PHPT1Q9NRX4 125 aaPredicted RBP11.81□□□□□ -0.52
GTF3C1-209ENST00000568569 DONSONQ9NYP3 566 aa11.81□□□□□ -0.52
GTF3C1-209ENST00000568569 RP1L1Q8IWN7 2480 aaPredicted RBP11.81□□□□□ -0.52
GTF3C1-209ENST00000568569 CREBBPQ92793 2442 aa11.8□□□□□ -0.52
GTF3C1-209ENST00000568569 IGHV1OR21-1A0A087WYE8 117 aa11.8□□□□□ -0.52
GTF3C1-209ENST00000568569 PRR19A6NJB7 356 aa11.8□□□□□ -0.52
GTF3C1-209ENST00000568569 F8VZ95 297 aa11.8□□□□□ -0.52
GTF3C1-209ENST00000568569 J3KR12 359 aa11.8□□□□□ -0.52
GTF3C1-209ENST00000568569 PPM1DO15297 605 aa11.8□□□□□ -0.52
GTF3C1-209ENST00000568569 FGF10O15520 208 aaPredicted RBP11.8□□□□□ -0.52
GTF3C1-209ENST00000568569 DUX1O43812 170 aa11.8□□□□□ -0.52
GTF3C1-209ENST00000568569 CREB3O43889 395 aa11.8□□□□□ -0.52
GTF3C1-209ENST00000568569 PRAMEF11O60813 436 aa11.8□□□□□ -0.52
GTF3C1-209ENST00000568569 KRT3P12035 628 aa11.8□□□□□ -0.52
GTF3C1-209ENST00000568569 UCHL3P15374 230 aa11.8□□□□□ -0.52
GTF3C1-209ENST00000568569 GM2AP17900 193 aa11.8□□□□□ -0.52
GTF3C1-209ENST00000568569 MPSTP25325 297 aa11.8□□□□□ -0.52
GTF3C1-209ENST00000568569 GNPDA1P46926 289 aa11.8□□□□□ -0.52
GTF3C1-209ENST00000568569 CSNK1DP48730 415 aa11.8□□□□□ -0.52
GTF3C1-209ENST00000568569 CD97P48960 835 aa11.8□□□□□ -0.52
GTF3C1-209ENST00000568569 GPLD1P80108 840 aa11.8□□□□□ -0.52
GTF3C1-209ENST00000568569 MC1RQ01726 317 aa11.8□□□□□ -0.52
GTF3C1-209ENST00000568569 BCL2L1Q07817 233 aa11.8□□□□□ -0.52
GTF3C1-209ENST00000568569 KLRB1Q12918 225 aa11.8□□□□□ -0.52
GTF3C1-209ENST00000568569 ACOX1Q15067 660 aa11.8□□□□□ -0.52
GTF3C1-209ENST00000568569 KLHDC7AQ5VTJ3 777 aa11.8□□□□□ -0.52
GTF3C1-209ENST00000568569 TMEM71Q6P5X7 295 aa11.8□□□□□ -0.52
GTF3C1-209ENST00000568569 SRLQ86TD4 932 aa11.8□□□□□ -0.52
GTF3C1-209ENST00000568569 HEATR4Q86WZ0 1026 aa11.8□□□□□ -0.52
GTF3C1-209ENST00000568569 NAGSQ8N159 534 aa11.8□□□□□ -0.52
GTF3C1-209ENST00000568569 PELI3Q8N2H9 469 aa11.8□□□□□ -0.52
GTF3C1-209ENST00000568569 STARD8Q92502 1023 aa11.8□□□□□ -0.52
GTF3C1-209ENST00000568569 RTP4Q96DX8 246 aa11.8□□□□□ -0.52
GTF3C1-209ENST00000568569 NUS1Q96E22 293 aa11.8□□□□□ -0.52
GTF3C1-209ENST00000568569 C11orf70Q9BRQ4 267 aa11.8□□□□□ -0.52
GTF3C1-209ENST00000568569 NAA15Q9BXJ9 866 aaKnown RBP11.8□□□□□ -0.52
GTF3C1-209ENST00000568569 LRRC19Q9H756 370 aa11.8□□□□□ -0.52
GTF3C1-209ENST00000568569 OCIAD1Q9NX40 245 aa11.8□□□□□ -0.52
GTF3C1-209ENST00000568569 KCNK4Q9NYG8 393 aa11.8□□□□□ -0.52
GTF3C1-209ENST00000568569 TMEM9Q9P0T7 183 aa11.8□□□□□ -0.52
GTF3C1-209ENST00000568569 SUFUQ9UMX1 484 aa11.8□□□□□ -0.52
GTF3C1-209ENST00000568569 ARHGEF17Q96PE2 2063 aaPredicted RBP11.8□□□□□ -0.52
GTF3C1-209ENST00000568569 ICE1Q9Y2F5 2266 aa11.79□□□□□ -0.52
GTF3C1-209ENST00000568569 LOC101059948A0A1B0GTJ6 334 aa11.79□□□□□ -0.52
GTF3C1-209ENST00000568569 MTSS1O43312 755 aa11.79□□□□□ -0.52
GTF3C1-209ENST00000568569 PALMO75781 387 aa11.79□□□□□ -0.52
GTF3C1-209ENST00000568569 CYP1A1P04798 512 aaPredicted RBP11.79□□□□□ -0.52
GTF3C1-209ENST00000568569 CEACAM5P06731 702 aa11.79□□□□□ -0.52
GTF3C1-209ENST00000568569 PRKCSHP14314 528 aaPredicted RBP11.79□□□□□ -0.52
GTF3C1-209ENST00000568569 GPD1P21695 349 aa11.79□□□□□ -0.52
GTF3C1-209ENST00000568569 ERCC5P28715 1186 aaPredicted RBP11.79□□□□□ -0.52
GTF3C1-209ENST00000568569 OAS2P29728 719 aaKnown RBP11.79□□□□□ -0.52
GTF3C1-209ENST00000568569 RGRP47804 291 aa11.79□□□□□ -0.52
GTF3C1-209ENST00000568569 NDST2P52849 883 aa11.79□□□□□ -0.52
GTF3C1-209ENST00000568569 ABHD18Q0P651 414 aa11.79□□□□□ -0.52
GTF3C1-209ENST00000568569 TPD52L1Q16890 204 aaPredicted RBP11.79□□□□□ -0.52
GTF3C1-209ENST00000568569 DEFB109BQ30KR1 87 aa11.79□□□□□ -0.52
GTF3C1-209ENST00000568569 VWA3BQ502W6 1294 aa11.79□□□□□ -0.52
GTF3C1-209ENST00000568569 CRTC2Q53ET0 693 aaPredicted RBP11.79□□□□□ -0.52
GTF3C1-209ENST00000568569 SCYL2Q6P3W7 929 aa11.79□□□□□ -0.52
GTF3C1-209ENST00000568569 CEACAM20Q6UY09 585 aa11.79□□□□□ -0.52
GTF3C1-209ENST00000568569 FAM114A1Q8IWE2 563 aa11.79□□□□□ -0.52
GTF3C1-209ENST00000568569 BMPERQ8N8U9 685 aa11.79□□□□□ -0.52
GTF3C1-209ENST00000568569 TSEN2Q8NCE0 465 aaKnown RBP11.79□□□□□ -0.52
GTF3C1-209ENST00000568569 AHCYL2Q96HN2 611 aaKnown RBP11.79□□□□□ -0.52
GTF3C1-209ENST00000568569 ZPBPQ9BS86 351 aa11.79□□□□□ -0.52
GTF3C1-209ENST00000568569 CINPQ9BW66 212 aaPredicted RBP11.79□□□□□ -0.52
GTF3C1-209ENST00000568569 TEX101Q9BY14 249 aa11.79□□□□□ -0.52
GTF3C1-209ENST00000568569 STK33Q9BYT3 514 aa11.79□□□□□ -0.52
GTF3C1-209ENST00000568569 FRMD8Q9BZ67 464 aaPredicted RBP11.79□□□□□ -0.52
GTF3C1-209ENST00000568569 TRIT1Q9H3H1 467 aaKnown RBP11.79□□□□□ -0.52
GTF3C1-209ENST00000568569 KCTD5Q9NXV2 234 aa11.79□□□□□ -0.52
GTF3C1-209ENST00000568569 PDP2Q9P2J9 529 aa11.79□□□□□ -0.52
GTF3C1-209ENST00000568569 NOCTQ9UK39 431 aaKnown RBP11.79□□□□□ -0.52
GTF3C1-209ENST00000568569 A8MX80 341 aa11.78□□□□□ -0.52
GTF3C1-209ENST00000568569 TRAFD1O14545 582 aaPredicted RBP11.78□□□□□ -0.52
GTF3C1-209ENST00000568569 FUCA1P04066 466 aa11.78□□□□□ -0.52
GTF3C1-209ENST00000568569 TCN2P20062 427 aa11.78□□□□□ -0.52
GTF3C1-209ENST00000568569 HTR7P34969 479 aa11.78□□□□□ -0.52
GTF3C1-209ENST00000568569 RFC1P35251 1148 aaPredicted RBP11.78□□□□□ -0.52
GTF3C1-209ENST00000568569 ADCY8P40145 1251 aa11.78□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms