RNA–Protein interactions for RNA: ENST00000567250.5

SF3B3-208, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 3

Gene SF3B3, Length 1,084 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-208ENST00000567250 SEMG2Q02383 582 aa12.18□□□□□ -0.46
SF3B3-208ENST00000567250 CKAP4Q07065 602 aaKnown RBP12.18□□□□□ -0.46
SF3B3-208ENST00000567250 SEMA5AQ13591 1074 aa12.18□□□□□ -0.46
SF3B3-208ENST00000567250 PPP1R7Q15435 360 aa12.18□□□□□ -0.46
SF3B3-208ENST00000567250 AASDHQ4L235 1098 aaPredicted RBP12.18□□□□□ -0.46
SF3B3-208ENST00000567250 SIRPB2Q5JXA9 342 aa12.18□□□□□ -0.46
SF3B3-208ENST00000567250 FAM182AQ5T1J6 154 aa12.18□□□□□ -0.46
SF3B3-208ENST00000567250 DENND2CQ68D51 928 aa12.18□□□□□ -0.46
SF3B3-208ENST00000567250 CRTC1Q6UUV9 634 aa12.18□□□□□ -0.46
SF3B3-208ENST00000567250 GCNT7Q6ZNI0 430 aa12.18□□□□□ -0.46
SF3B3-208ENST00000567250 PRR23CQ6ZRP0 262 aa12.18□□□□□ -0.46
SF3B3-208ENST00000567250 PTAR1Q7Z6K3 402 aaPredicted RBP12.18□□□□□ -0.46
SF3B3-208ENST00000567250 DCP2Q8IU60 420 aaKnown RBP12.18□□□□□ -0.46
SF3B3-208ENST00000567250 OXR1Q8N573 874 aa12.18□□□□□ -0.46
SF3B3-208ENST00000567250 MFSD2AQ8NA29 543 aa12.18□□□□□ -0.46
SF3B3-208ENST00000567250 DTD2Q96FN9 168 aa12.18□□□□□ -0.46
SF3B3-208ENST00000567250 MYOCQ99972 504 aa12.18□□□□□ -0.46
SF3B3-208ENST00000567250 GORASP1Q9BQQ3 440 aa12.18□□□□□ -0.46
SF3B3-208ENST00000567250 GPR63Q9BZJ6 419 aa12.18□□□□□ -0.46
SF3B3-208ENST00000567250 CDH19Q9H159 772 aa12.18□□□□□ -0.46
SF3B3-208ENST00000567250 EBF2Q9HAK2 575 aa12.18□□□□□ -0.46
SF3B3-208ENST00000567250 ZFYVE1Q9HBF4 777 aa12.18□□□□□ -0.46
SF3B3-208ENST00000567250 CAPN10Q9HC96 672 aa12.18□□□□□ -0.46
SF3B3-208ENST00000567250 FZD3Q9NPG1 666 aa12.18□□□□□ -0.46
SF3B3-208ENST00000567250 EIF2B3Q9NR50 452 aaKnown RBP12.18□□□□□ -0.46
SF3B3-208ENST00000567250 COQ6Q9Y2Z9 468 aa12.18□□□□□ -0.46
SF3B3-208ENST00000567250 HS3ST3A1Q9Y663 406 aa12.18□□□□□ -0.46
SF3B3-208ENST00000567250 DMDP11532 3685 aa12.17□□□□□ -0.46
SF3B3-208ENST00000567250 USP34Q70CQ2 3546 aa12.17□□□□□ -0.46
SF3B3-208ENST00000567250 SDK1Q7Z5N4 2213 aa12.17□□□□□ -0.46
SF3B3-208ENST00000567250 AP3B1O00203 1094 aa12.17□□□□□ -0.46
SF3B3-208ENST00000567250 FANCGO15287 622 aa12.17□□□□□ -0.46
SF3B3-208ENST00000567250 PPFIA2O75334 1257 aa12.17□□□□□ -0.46
SF3B3-208ENST00000567250 CER1O95813 267 aa12.17□□□□□ -0.46
SF3B3-208ENST00000567250 KRT14P02533 472 aa12.17□□□□□ -0.46
SF3B3-208ENST00000567250 SLC4A1P02730 911 aa12.17□□□□□ -0.46
SF3B3-208ENST00000567250 APRTP07741 180 aa12.17□□□□□ -0.46
SF3B3-208ENST00000567250 TSHRP16473 764 aa12.17□□□□□ -0.46
SF3B3-208ENST00000567250 ADRA1AP35348 466 aa12.17□□□□□ -0.46
SF3B3-208ENST00000567250 IGFALSP35858 605 aa12.17□□□□□ -0.46
SF3B3-208ENST00000567250 STC1P52823 247 aa12.17□□□□□ -0.46
SF3B3-208ENST00000567250 THOP1P52888 689 aa12.17□□□□□ -0.46
SF3B3-208ENST00000567250 PDE1BQ01064 536 aa12.17□□□□□ -0.46
SF3B3-208ENST00000567250 CDH17Q12864 832 aa12.17□□□□□ -0.46
SF3B3-208ENST00000567250 GRIK2Q13002 908 aa12.17□□□□□ -0.46
SF3B3-208ENST00000567250 MTM1Q13496 603 aa12.17□□□□□ -0.46
SF3B3-208ENST00000567250 PTK2BQ14289 1009 aa12.17□□□□□ -0.46
SF3B3-208ENST00000567250 FGL2Q14314 439 aa12.17□□□□□ -0.46
SF3B3-208ENST00000567250 IRF4Q15306 451 aa12.17□□□□□ -0.46
SF3B3-208ENST00000567250 CCDC6Q16204 474 aa12.17□□□□□ -0.46
SF3B3-208ENST00000567250 FAXCQ5TGI0 409 aa12.17□□□□□ -0.46
SF3B3-208ENST00000567250 ZDHHC20Q5W0Z9 365 aa12.17□□□□□ -0.46
SF3B3-208ENST00000567250 KCTD11Q693B1 232 aa12.17□□□□□ -0.46
SF3B3-208ENST00000567250 ESRP1Q6NXG1 681 aaKnown RBP12.17□□□□□ -0.46
SF3B3-208ENST00000567250 TTC27Q6P3X3 843 aa12.17□□□□□ -0.46
SF3B3-208ENST00000567250 ZNF765Q7L2R6 523 aa12.17□□□□□ -0.46
SF3B3-208ENST00000567250 LYSMD3Q7Z3D4 306 aa12.17□□□□□ -0.46
SF3B3-208ENST00000567250 GLT6D1Q7Z4J2 308 aa12.17□□□□□ -0.46
SF3B3-208ENST00000567250 ABI3BPQ7Z7G0 1075 aa12.17□□□□□ -0.46
SF3B3-208ENST00000567250 TSPAN33Q86UF1 283 aa12.17□□□□□ -0.46
SF3B3-208ENST00000567250 NRSN1Q8IZ57 195 aa12.17□□□□□ -0.46
SF3B3-208ENST00000567250 SLC25A41Q8N5S1 370 aa12.17□□□□□ -0.46
SF3B3-208ENST00000567250 PDCD7Q8N8D1 485 aaKnown RBP12.17□□□□□ -0.46
SF3B3-208ENST00000567250 TP53I13Q8NBR0 393 aaPredicted RBP12.17□□□□□ -0.46
SF3B3-208ENST00000567250 BLOC1S5Q8TDH9 187 aa12.17□□□□□ -0.46
SF3B3-208ENST00000567250 ZNF592Q92610 1267 aa12.17□□□□□ -0.46
SF3B3-208ENST00000567250 SLCO2A1Q92959 643 aa12.17□□□□□ -0.46
SF3B3-208ENST00000567250 KLHDC7BQ96G42 594 aa12.17□□□□□ -0.46
SF3B3-208ENST00000567250 COQ10AQ96MF6 247 aa12.17□□□□□ -0.46
SF3B3-208ENST00000567250 KLF6Q99612 283 aaPredicted RBP12.17□□□□□ -0.46
SF3B3-208ENST00000567250 EDEM2Q9BV94 578 aa12.17□□□□□ -0.46
SF3B3-208ENST00000567250 DDX47Q9H0S4 455 aaKnown RBP12.17□□□□□ -0.46
SF3B3-208ENST00000567250 ETNK1Q9HBU6 452 aa12.17□□□□□ -0.46
SF3B3-208ENST00000567250 GDF3Q9NR23 364 aa12.17□□□□□ -0.46
SF3B3-208ENST00000567250 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP12.16□□□□□ -0.46
SF3B3-208ENST00000567250 LNP1A1A4G5 178 aa12.16□□□□□ -0.46
SF3B3-208ENST00000567250 PATE3B3GLJ2 98 aa12.16□□□□□ -0.46
SF3B3-208ENST00000567250 ARHGAP33O14559 1287 aa12.16□□□□□ -0.46
SF3B3-208ENST00000567250 YKT6O15498 198 aa12.16□□□□□ -0.46
SF3B3-208ENST00000567250 DFNA5O60443 496 aa12.16□□□□□ -0.46
SF3B3-208ENST00000567250 CLDN7O95471 211 aa12.16□□□□□ -0.46
SF3B3-208ENST00000567250 CRTAMO95727 393 aa12.16□□□□□ -0.46
SF3B3-208ENST00000567250 AGTP01019 485 aa12.16□□□□□ -0.46
SF3B3-208ENST00000567250 PCCBP05166 539 aa12.16□□□□□ -0.46
SF3B3-208ENST00000567250 C1SP09871 688 aa12.16□□□□□ -0.46
SF3B3-208ENST00000567250 THEGLP0DJG4 465 aa12.16□□□□□ -0.46
SF3B3-208ENST00000567250 ETS1P14921 441 aa12.16□□□□□ -0.46
SF3B3-208ENST00000567250 ENGP17813 658 aa12.16□□□□□ -0.46
SF3B3-208ENST00000567250 RPL22P35268 128 aaKnown RBP12.16□□□□□ -0.46
SF3B3-208ENST00000567250 HMGCLP35914 325 aa12.16□□□□□ -0.46
SF3B3-208ENST00000567250 ETV3P41162 512 aa12.16□□□□□ -0.46
SF3B3-208ENST00000567250 CHRNA4P43681 627 aa12.16□□□□□ -0.46
SF3B3-208ENST00000567250 CSNK1EP49674 416 aaKnown RBP12.16□□□□□ -0.46
SF3B3-208ENST00000567250 DCDC1P59894 354 aa12.16□□□□□ -0.46
SF3B3-208ENST00000567250 YPEL5P62699 121 aa12.16□□□□□ -0.46
SF3B3-208ENST00000567250 SARNPP82979 210 aaKnown RBP12.16□□□□□ -0.46
SF3B3-208ENST00000567250 CDK16Q00536 496 aa12.16□□□□□ -0.46
SF3B3-208ENST00000567250 DPTQ07507 201 aa12.16□□□□□ -0.46
SF3B3-208ENST00000567250 TUBB2AQ13885 445 aa12.16□□□□□ -0.46
SF3B3-208ENST00000567250 DHX34Q14147 1143 aaKnown RBP12.16□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms