RNA–Protein interactions for RNA: ENST00000567003.1

PALB2-205, Transcript of partner and localizer of BRCA2, humanhuman

TSL 3

Gene PALB2, Length 789 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PALB2-205ENST00000567003 VPS16Q9H269 839 aa15.51■□□□□ 0.07
PALB2-205ENST00000567003 FAM207AQ9NSI2 230 aaPredicted RBP15.51■□□□□ 0.07
PALB2-205ENST00000567003 AKAP7Q9P0M2 348 aaPredicted RBP15.51■□□□□ 0.07
PALB2-205ENST00000567003 TAAR2Q9P1P5 351 aa15.51■□□□□ 0.07
PALB2-205ENST00000567003 PLEKHM1Q9Y4G2 1056 aa15.51■□□□□ 0.07
PALB2-205ENST00000567003 B3GALT1Q9Y5Z6 326 aa15.51■□□□□ 0.07
PALB2-205ENST00000567003 USP9YO00507 2555 aaPredicted RBP15.51■□□□□ 0.07
PALB2-205ENST00000567003 HOXC4P09017 264 aaPredicted RBP15.5■□□□□ 0.07
PALB2-205ENST00000567003 UGT1A3P35503 534 aa15.5■□□□□ 0.07
PALB2-205ENST00000567003 SOX5P35711 763 aa15.5■□□□□ 0.07
PALB2-205ENST00000567003 POLD2P49005 469 aa15.5■□□□□ 0.07
PALB2-205ENST00000567003 ATP1A2P50993 1020 aa15.5■□□□□ 0.07
PALB2-205ENST00000567003 GSCP56915 257 aaPredicted RBP15.5■□□□□ 0.07
PALB2-205ENST00000567003 OGDHQ02218 1023 aa15.5■□□□□ 0.07
PALB2-205ENST00000567003 BCL2L1Q07817 233 aa15.5■□□□□ 0.07
PALB2-205ENST00000567003 BECN1Q14457 450 aa15.5■□□□□ 0.07
PALB2-205ENST00000567003 CA9Q16790 459 aa15.5■□□□□ 0.07
PALB2-205ENST00000567003 AFMIDQ63HM1 303 aa15.5■□□□□ 0.07
PALB2-205ENST00000567003 DENND2CQ68D51 928 aa15.5■□□□□ 0.07
PALB2-205ENST00000567003 DNAJC24Q6P3W2 148 aa15.5■□□□□ 0.07
PALB2-205ENST00000567003 HEATR4Q86WZ0 1026 aa15.5■□□□□ 0.07
PALB2-205ENST00000567003 IL22RA1Q8N6P7 574 aa15.5■□□□□ 0.07
PALB2-205ENST00000567003 GPBAR1Q8TDU6 330 aa15.5■□□□□ 0.07
PALB2-205ENST00000567003 ART4Q93070 314 aa15.5■□□□□ 0.07
PALB2-205ENST00000567003 ECHDC3Q96DC8 303 aa15.5■□□□□ 0.07
PALB2-205ENST00000567003 TAAR9Q96RI9 348 aa15.5■□□□□ 0.07
PALB2-205ENST00000567003 B4GALT6Q9UBX8 382 aa15.5■□□□□ 0.07
PALB2-205ENST00000567003 USP9XQ93008 2570 aaPredicted RBP15.5■□□□□ 0.07
PALB2-205ENST00000567003 SPTAN1Q13813 2472 aaKnown RBP15.5■□□□□ 0.07
PALB2-205ENST00000567003 TCRBV5S1A1TA0A578 114 aa15.49■□□□□ 0.07
PALB2-205ENST00000567003 CFAP69A5D8W1 941 aa15.49■□□□□ 0.07
PALB2-205ENST00000567003 SIGLEC16A6NMB1 481 aa15.49■□□□□ 0.07
PALB2-205ENST00000567003 HGSO14964 777 aaPredicted RBP15.49■□□□□ 0.07
PALB2-205ENST00000567003 PPM1DO15297 605 aa15.49■□□□□ 0.07
PALB2-205ENST00000567003 FGF10O15520 208 aaPredicted RBP15.49■□□□□ 0.07
PALB2-205ENST00000567003 DUX1O43812 170 aa15.49■□□□□ 0.07
PALB2-205ENST00000567003 PALMO75781 387 aa15.49■□□□□ 0.07
PALB2-205ENST00000567003 CEACAM5P06731 702 aa15.49■□□□□ 0.07
PALB2-205ENST00000567003 MYCLP1P12525 358 aaPredicted RBP15.49■□□□□ 0.07
PALB2-205ENST00000567003 ZNF143P52747 638 aaPredicted RBP15.49■□□□□ 0.07
PALB2-205ENST00000567003 NR1D2Q14995 579 aa15.49■□□□□ 0.07
PALB2-205ENST00000567003 PTPRRQ15256 657 aa15.49■□□□□ 0.07
PALB2-205ENST00000567003 CNGA3Q16281 694 aa15.49■□□□□ 0.07
PALB2-205ENST00000567003 TCP11X2Q5H9J9 407 aa15.49■□□□□ 0.07
PALB2-205ENST00000567003 TRIM72Q6ZMU5 477 aa15.49■□□□□ 0.07
PALB2-205ENST00000567003 MON1BQ7L1V2 547 aa15.49■□□□□ 0.07
PALB2-205ENST00000567003 ZNF761Q86XN6 746 aaPredicted RBP15.49■□□□□ 0.07
PALB2-205ENST00000567003 PHF13Q86YI8 300 aaPredicted RBP15.49■□□□□ 0.07
PALB2-205ENST00000567003 TP53INP2Q8IXH6 220 aa15.49■□□□□ 0.07
PALB2-205ENST00000567003 NUS1Q96E22 293 aa15.49■□□□□ 0.07
PALB2-205ENST00000567003 COQ10AQ96MF6 247 aa15.49■□□□□ 0.07
PALB2-205ENST00000567003 CINPQ9BW66 212 aaPredicted RBP15.49■□□□□ 0.07
PALB2-205ENST00000567003 GSDMCQ9BYG8 508 aa15.49■□□□□ 0.07
PALB2-205ENST00000567003 ADNPQ9H2P0 1102 aa15.49■□□□□ 0.07
PALB2-205ENST00000567003 ZNF71Q9NQZ8 489 aaPredicted RBP15.49■□□□□ 0.07
PALB2-205ENST00000567003 SEPT11Q9NVA2 429 aaKnown RBP15.49■□□□□ 0.07
PALB2-205ENST00000567003 OCIAD1Q9NX40 245 aa15.49■□□□□ 0.07
PALB2-205ENST00000567003 SUFUQ9UMX1 484 aa15.49■□□□□ 0.07
PALB2-205ENST00000567003 GOLGA6CA6NDK9 693 aa15.48■□□□□ 0.07
PALB2-205ENST00000567003 GOLGA6BA6NDN3 693 aa15.48■□□□□ 0.07
PALB2-205ENST00000567003 ARHGAP42A6NI28 874 aa15.48■□□□□ 0.07
PALB2-205ENST00000567003 DFFAO00273 331 aa15.48■□□□□ 0.07
PALB2-205ENST00000567003 TRAFD1O14545 582 aaPredicted RBP15.48■□□□□ 0.07
PALB2-205ENST00000567003 RAD1O60671 282 aa15.48■□□□□ 0.07
PALB2-205ENST00000567003 CALB1P05937 261 aa15.48■□□□□ 0.07
PALB2-205ENST00000567003 GOLGA6DP0CG33 693 aa15.48■□□□□ 0.07
PALB2-205ENST00000567003 PRKAR1AP10644 381 aa15.48■□□□□ 0.07
PALB2-205ENST00000567003 STAT1P42224 750 aa15.48■□□□□ 0.07
PALB2-205ENST00000567003 CSNK1DP48730 415 aa15.48■□□□□ 0.07
PALB2-205ENST00000567003 SCNN1BP51168 640 aa15.48■□□□□ 0.07
PALB2-205ENST00000567003 NDST2P52849 883 aa15.48■□□□□ 0.07
PALB2-205ENST00000567003 LIMK2P53671 638 aa15.48■□□□□ 0.07
PALB2-205ENST00000567003 ILF3Q12906 894 aaKnown RBP eCLIP15.48■□□□□ 0.076e-11■■■■□ 20.3
PALB2-205ENST00000567003 BIRC2Q13490 618 aa15.48■□□□□ 0.07
PALB2-205ENST00000567003 UBAP2LQ14157 1087 aaKnown RBP15.48■□□□□ 0.07
PALB2-205ENST00000567003 TSR1Q2NL82 804 aaKnown RBP15.48■□□□□ 0.07
PALB2-205ENST00000567003 DOK6Q6PKX4 331 aa15.48■□□□□ 0.07
PALB2-205ENST00000567003 ARHGAP12Q8IWW6 846 aa15.48■□□□□ 0.07
PALB2-205ENST00000567003 CACNA2D3Q8IZS8 1091 aa15.48■□□□□ 0.07
PALB2-205ENST00000567003 NAGSQ8N159 534 aa15.48■□□□□ 0.07
PALB2-205ENST00000567003 NPWQ8N729 165 aa15.48■□□□□ 0.07
PALB2-205ENST00000567003 FRMD8Q9BZ67 464 aaPredicted RBP15.48■□□□□ 0.07
PALB2-205ENST00000567003 B3GNT4Q9C0J1 378 aa15.48■□□□□ 0.07
PALB2-205ENST00000567003 SP110Q9HB58 689 aa15.48■□□□□ 0.07
PALB2-205ENST00000567003 SLC39A1Q9NY26 324 aa15.48■□□□□ 0.07
PALB2-205ENST00000567003 GOLGA6AQ9NYA3 693 aa15.48■□□□□ 0.07
PALB2-205ENST00000567003 PCDHGA3Q9Y5H0 932 aa15.48■□□□□ 0.07
PALB2-205ENST00000567003 IGHV1OR21-1A0A087WYE8 117 aa15.47■□□□□ 0.07
PALB2-205ENST00000567003 A0A0U1RQS6 177 aa15.47■□□□□ 0.07
PALB2-205ENST00000567003 EFCAB7A8K855 629 aa15.47■□□□□ 0.07
PALB2-205ENST00000567003 EEF2KO00418 725 aaKnown RBP15.47■□□□□ 0.07
PALB2-205ENST00000567003 NKX2-8O15522 239 aa15.47■□□□□ 0.07
PALB2-205ENST00000567003 THRAP10827 490 aa15.47■□□□□ 0.07
PALB2-205ENST00000567003 ETV3P41162 512 aa15.47■□□□□ 0.07
PALB2-205ENST00000567003 UBE2HP62256 183 aa15.47■□□□□ 0.07
PALB2-205ENST00000567003 CTBSQ01459 385 aa15.47■□□□□ 0.07
PALB2-205ENST00000567003 PPP1R15BQ5SWA1 713 aa15.47■□□□□ 0.07
PALB2-205ENST00000567003 ANKS6Q68DC2 871 aa15.47■□□□□ 0.07
PALB2-205ENST00000567003 HSD11B1LQ7Z5J1 315 aa15.47■□□□□ 0.07
PALB2-205ENST00000567003 FAM129CQ86XR2 697 aa15.47■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms