RNA–Protein interactions for RNA: ENST00000566661.5

KLHDC4-217, Transcript of kelch domain containing 4, humanhuman

TSL 5

Gene KLHDC4, Length 2,232 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KLHDC4-217ENST00000566661 HMBSP08397 361 aa17.48■□□□□ 0.39
KLHDC4-217ENST00000566661 HAPLN1P10915 354 aaPredicted RBP17.48■□□□□ 0.39
KLHDC4-217ENST00000566661 PGGT1BP53609 377 aa17.48■□□□□ 0.39
KLHDC4-217ENST00000566661 MYBPC1Q00872 1141 aa17.48■□□□□ 0.39
KLHDC4-217ENST00000566661 RHDQ02161 417 aa17.48■□□□□ 0.39
KLHDC4-217ENST00000566661 NRG1Q02297 640 aaPredicted RBP17.48■□□□□ 0.39
KLHDC4-217ENST00000566661 ACAP2Q15057 778 aa17.48■□□□□ 0.39
KLHDC4-217ENST00000566661 MS4A13Q5J8X5 152 aa17.48■□□□□ 0.39
KLHDC4-217ENST00000566661 TFAP2DQ7Z6R9 452 aa17.48■□□□□ 0.39
KLHDC4-217ENST00000566661 RNF148Q8N7C7 305 aa17.48■□□□□ 0.39
KLHDC4-217ENST00000566661 CNBD2Q96M20 576 aa17.48■□□□□ 0.39
KLHDC4-217ENST00000566661 TTPALQ9BTX7 342 aa17.48■□□□□ 0.39
KLHDC4-217ENST00000566661 SLC25A23Q9BV35 468 aa17.48■□□□□ 0.39
KLHDC4-217ENST00000566661 AP4S1Q9Y587 144 aa17.48■□□□□ 0.39
KLHDC4-217ENST00000566661 A8MT66 165 aa17.47■□□□□ 0.39
KLHDC4-217ENST00000566661 PSMD12O00232 456 aaPredicted RBP17.47■□□□□ 0.39
KLHDC4-217ENST00000566661 TRIM24O15164 1050 aa17.47■□□□□ 0.39
KLHDC4-217ENST00000566661 HOXA2O43364 376 aa17.47■□□□□ 0.39
KLHDC4-217ENST00000566661 RNASEH2AO75792 299 aaKnown RBP17.47■□□□□ 0.39
KLHDC4-217ENST00000566661 PAPSS2O95340 614 aaPredicted RBP17.47■□□□□ 0.39
KLHDC4-217ENST00000566661 HLA-DQB2P05538 268 aa17.47■□□□□ 0.39
KLHDC4-217ENST00000566661 SLC2A3P11169 496 aa17.47■□□□□ 0.39
KLHDC4-217ENST00000566661 ZNF26P17031 533 aaPredicted RBP17.47■□□□□ 0.39
KLHDC4-217ENST00000566661 C10orf120Q5SQS8 335 aa17.47■□□□□ 0.39
KLHDC4-217ENST00000566661 FAM45BPQ6NSW5 357 aa17.47■□□□□ 0.39
KLHDC4-217ENST00000566661 LIN28BQ6ZN17 250 aaKnown RBP eCLIP17.47■□□□□ 0.39
KLHDC4-217ENST00000566661 GK5Q6ZS86 529 aa17.47■□□□□ 0.39
KLHDC4-217ENST00000566661 FAM45AQ8TCE6 357 aa17.47■□□□□ 0.39
KLHDC4-217ENST00000566661 FATE1Q969F0 183 aa17.47■□□□□ 0.39
KLHDC4-217ENST00000566661 SPAG4Q9NPE6 437 aa17.47■□□□□ 0.39
KLHDC4-217ENST00000566661 RBM22Q9NW64 420 aaKnown RBP eCLIP17.47■□□□□ 0.39
KLHDC4-217ENST00000566661 DMTF1Q9Y222 760 aa17.47■□□□□ 0.39
KLHDC4-217ENST00000566661 GREB1Q4ZG55 1949 aa17.47■□□□□ 0.39
KLHDC4-217ENST00000566661 CNTN5O94779 1100 aa17.47■□□□□ 0.39
KLHDC4-217ENST00000566661 ETS2P15036 469 aa17.47■□□□□ 0.39
KLHDC4-217ENST00000566661 MSX2P35548 267 aaPredicted RBP17.47■□□□□ 0.39
KLHDC4-217ENST00000566661 ACADVLP49748 655 aa17.47■□□□□ 0.39
KLHDC4-217ENST00000566661 RPS6KA3P51812 740 aa17.47■□□□□ 0.39
KLHDC4-217ENST00000566661 NR1H2P55055 460 aa17.47■□□□□ 0.39
KLHDC4-217ENST00000566661 PDAP1Q13442 181 aaKnown RBP17.47■□□□□ 0.39
KLHDC4-217ENST00000566661 FASTKQ14296 549 aaKnown RBP17.47■□□□□ 0.39
KLHDC4-217ENST00000566661 CSHL1Q14406 222 aa17.47■□□□□ 0.39
KLHDC4-217ENST00000566661 ALFQ53S48 1182 aa17.47■□□□□ 0.39
KLHDC4-217ENST00000566661 B3GNT6Q6ZMB0 384 aa17.47■□□□□ 0.39
KLHDC4-217ENST00000566661 CUZD1Q86UP6 607 aa17.47■□□□□ 0.39
KLHDC4-217ENST00000566661 SPATA6LQ8N4H0 392 aa17.47■□□□□ 0.39
KLHDC4-217ENST00000566661 UBXN10Q96LJ8 280 aa17.47■□□□□ 0.39
KLHDC4-217ENST00000566661 ZNF597Q96LX8 424 aa17.47■□□□□ 0.39
KLHDC4-217ENST00000566661 UHRF1Q96T88 793 aaPredicted RBP17.47■□□□□ 0.39
KLHDC4-217ENST00000566661 TMEM175Q9BSA9 504 aa17.47■□□□□ 0.39
KLHDC4-217ENST00000566661 MRPL9Q9BYD2 267 aaKnown RBP17.47■□□□□ 0.39
KLHDC4-217ENST00000566661 RNF208Q9H0X6 261 aa17.47■□□□□ 0.39
KLHDC4-217ENST00000566661 RBM38Q9H0Z9 239 aaKnown RBP17.47■□□□□ 0.39
KLHDC4-217ENST00000566661 TRPC7Q9HCX4 862 aa17.47■□□□□ 0.39
KLHDC4-217ENST00000566661 PRDM5Q9NQX1 630 aaPredicted RBP17.47■□□□□ 0.39
KLHDC4-217ENST00000566661 TLR8Q9NR97 1041 aaKnown RBP17.47■□□□□ 0.39
KLHDC4-217ENST00000566661 MARCH2Q9P0N8 246 aa17.47■□□□□ 0.39
KLHDC4-217ENST00000566661 THEGQ9P2T0 379 aa17.47■□□□□ 0.39
KLHDC4-217ENST00000566661 MYLKQ15746 1914 aa17.46■□□□□ 0.39
KLHDC4-217ENST00000566661 ARHGAP10A1A4S6 786 aa17.46■□□□□ 0.39
KLHDC4-217ENST00000566661 H7C4K7 107 aa17.46■□□□□ 0.39
KLHDC4-217ENST00000566661 VILLO15195 856 aa17.46■□□□□ 0.39
KLHDC4-217ENST00000566661 SNRPB2P08579 225 aaKnown RBP17.46■□□□□ 0.39
KLHDC4-217ENST00000566661 HNRNPLP14866 589 aaKnown RBP eCLIP17.46■□□□□ 0.39
KLHDC4-217ENST00000566661 RPL17P18621 184 aaKnown RBP17.46■□□□□ 0.39
KLHDC4-217ENST00000566661 ELAVL2Q12926 359 aaKnown RBP17.46■□□□□ 0.39
KLHDC4-217ENST00000566661 TRIP4Q15650 581 aaPredicted RBP17.46■□□□□ 0.39
KLHDC4-217ENST00000566661 TMEM259Q4ZIN3 620 aa17.46■□□□□ 0.39
KLHDC4-217ENST00000566661 REP15Q6BDI9 236 aa17.46■□□□□ 0.39
KLHDC4-217ENST00000566661 ANKS3Q6ZW76 656 aa17.46■□□□□ 0.39
KLHDC4-217ENST00000566661 EME1Q96AY2 570 aa17.46■□□□□ 0.39
KLHDC4-217ENST00000566661 OSBPL11Q9BXB4 747 aa17.46■□□□□ 0.39
KLHDC4-217ENST00000566661 SLC25A51Q9H1U9 297 aa17.46■□□□□ 0.39
KLHDC4-217ENST00000566661 SUDS3Q9H7L9 328 aaPredicted RBP17.46■□□□□ 0.39
KLHDC4-217ENST00000566661 CCSER2Q9H7U1 834 aa17.46■□□□□ 0.39
KLHDC4-217ENST00000566661 ATP13A1Q9HD20 1204 aa17.46■□□□□ 0.39
KLHDC4-217ENST00000566661 IPO11Q9UI26 975 aaKnown RBP17.46■□□□□ 0.39
KLHDC4-217ENST00000566661 OGDHLQ9ULD0 1010 aa17.46■□□□□ 0.39
KLHDC4-217ENST00000566661 TCRBV3S1A0A5B6 114 aa17.45■□□□□ 0.38
KLHDC4-217ENST00000566661 SLC12A8A0AV02 714 aa17.45■□□□□ 0.38
KLHDC4-217ENST00000566661 WASH4PA8MWX3 477 aa17.45■□□□□ 0.38
KLHDC4-217ENST00000566661 E7ENX8 843 aa17.45■□□□□ 0.38
KLHDC4-217ENST00000566661 PMPCBO75439 489 aa17.45■□□□□ 0.38
KLHDC4-217ENST00000566661 OR6B1O95007 311 aa17.45■□□□□ 0.38
KLHDC4-217ENST00000566661 CXCL10P02778 98 aa17.45■□□□□ 0.38
KLHDC4-217ENST00000566661 PSMC3P17980 439 aa17.45■□□□□ 0.38
KLHDC4-217ENST00000566661 TXNL4AP83876 142 aaKnown RBP17.45■□□□□ 0.38
KLHDC4-217ENST00000566661 LARP7Q4G0J3 582 aaKnown RBP eCLIP17.45■□□□□ 0.38
KLHDC4-217ENST00000566661 NADK2Q4G0N4 442 aa17.45■□□□□ 0.38
KLHDC4-217ENST00000566661 SAMD4BQ5PRF9 694 aaKnown RBP17.45■□□□□ 0.38
KLHDC4-217ENST00000566661 IL23RQ5VWK5 629 aa17.45■□□□□ 0.38
KLHDC4-217ENST00000566661 RAP1GAP2Q684P5 730 aa17.45■□□□□ 0.38
KLHDC4-217ENST00000566661 RBM44Q6ZP01 1051 aaKnown RBP17.45■□□□□ 0.38
KLHDC4-217ENST00000566661 CHERPQ8IWX8 916 aaKnown RBP17.45■□□□□ 0.38
KLHDC4-217ENST00000566661 HMGCLL1Q8TB92 370 aa17.45■□□□□ 0.38
KLHDC4-217ENST00000566661 IGSF8Q969P0 613 aa17.45■□□□□ 0.38
KLHDC4-217ENST00000566661 SGF29Q96ES7 293 aa17.45■□□□□ 0.38
KLHDC4-217ENST00000566661 SPATA17Q96L03 361 aa17.45■□□□□ 0.38
KLHDC4-217ENST00000566661 EFHD1Q9BUP0 239 aa17.45■□□□□ 0.38
KLHDC4-217ENST00000566661 VPS45Q9NRW7 570 aa17.45■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms