RNA–Protein interactions for RNA: ENST00000566560.5

KARS-207, Transcript of lysyl-tRNA synthetase, humanhuman

TSL 1 (best)

Gene KARS, Length 1,231 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KARS-207ENST00000566560 PPIL1Q9Y3C6 166 aa11.5□□□□□ -0.57
KARS-207ENST00000566560 HCN4Q9Y3Q4 1203 aa11.5□□□□□ -0.57
KARS-207ENST00000566560 ZNF711Q9Y462 761 aa11.5□□□□□ -0.57
KARS-207ENST00000566560 R4GN57 208 aa11.5□□□□□ -0.57
KARS-207ENST00000566560 ZNF106Q9H2Y7 1883 aaKnown RBP11.49□□□□□ -0.57
KARS-207ENST00000566560 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa11.49□□□□□ -0.57
KARS-207ENST00000566560 DNALI1O14645 258 aaPredicted RBP11.49□□□□□ -0.57
KARS-207ENST00000566560 MMP20O60882 483 aa11.49□□□□□ -0.57
KARS-207ENST00000566560 FSBPO95073 299 aa11.49□□□□□ -0.57
KARS-207ENST00000566560 ZNF30P17039 623 aa11.49□□□□□ -0.57
KARS-207ENST00000566560 MAT2AP31153 395 aaKnown RBP11.49□□□□□ -0.57
KARS-207ENST00000566560 MAGEA6P43360 314 aa11.49□□□□□ -0.57
KARS-207ENST00000566560 LIG3P49916 1009 aa11.49□□□□□ -0.57
KARS-207ENST00000566560 RPS21P63220 83 aaKnown RBP11.49□□□□□ -0.57
KARS-207ENST00000566560 CDK16Q00536 496 aa11.49□□□□□ -0.57
KARS-207ENST00000566560 CDH17Q12864 832 aa11.49□□□□□ -0.57
KARS-207ENST00000566560 SIM2Q14190 667 aaPredicted RBP11.49□□□□□ -0.57
KARS-207ENST00000566560 PTPRRQ15256 657 aa11.49□□□□□ -0.57
KARS-207ENST00000566560 TMEM52BQ4KMG9 183 aa11.49□□□□□ -0.57
KARS-207ENST00000566560 RNASEH2BQ5TBB1 312 aaKnown RBP11.49□□□□□ -0.57
KARS-207ENST00000566560 ANKRD22Q5VYY1 191 aa11.49□□□□□ -0.57
KARS-207ENST00000566560 DENND2CQ68D51 928 aa11.49□□□□□ -0.57
KARS-207ENST00000566560 CRTC1Q6UUV9 634 aa11.49□□□□□ -0.57
KARS-207ENST00000566560 RANBP10Q6VN20 620 aa11.49□□□□□ -0.57
KARS-207ENST00000566560 LYSMD3Q7Z3D4 306 aa11.49□□□□□ -0.57
KARS-207ENST00000566560 GLT6D1Q7Z4J2 308 aa11.49□□□□□ -0.57
KARS-207ENST00000566560 PPIL6Q8IXY8 311 aa11.49□□□□□ -0.57
KARS-207ENST00000566560 TMEFF1Q8IYR6 380 aa11.49□□□□□ -0.57
KARS-207ENST00000566560 MMGT1Q8N4V1 131 aa11.49□□□□□ -0.57
KARS-207ENST00000566560 DEFB119Q8N690 84 aa11.49□□□□□ -0.57
KARS-207ENST00000566560 DNAAF3Q8N9W5 541 aa11.49□□□□□ -0.57
KARS-207ENST00000566560 CADM4Q8NFZ8 388 aa11.49□□□□□ -0.57
KARS-207ENST00000566560 OR52K1Q8NGK4 314 aa11.49□□□□□ -0.57
KARS-207ENST00000566560 FOXJ1Q92949 421 aa11.49□□□□□ -0.57
KARS-207ENST00000566560 SNF8Q96H20 258 aa11.49□□□□□ -0.57
KARS-207ENST00000566560 SRPK1Q96SB4 655 aaKnown RBP11.49□□□□□ -0.57
KARS-207ENST00000566560 KCNH6Q9H252 994 aa11.49□□□□□ -0.57
KARS-207ENST00000566560 HACD3Q9P035 362 aa11.49□□□□□ -0.57
KARS-207ENST00000566560 TPX2Q9ULW0 747 aaKnown RBP11.49□□□□□ -0.57
KARS-207ENST00000566560 ZFR2Q9UPR6 939 aaKnown RBP11.49□□□□□ -0.57
KARS-207ENST00000566560 SHOC2Q9UQ13 582 aa11.49□□□□□ -0.57
KARS-207ENST00000566560 ZBTB32Q9Y2Y4 487 aaPredicted RBP11.49□□□□□ -0.57
KARS-207ENST00000566560 UTP11Q9Y3A2 253 aaKnown RBP11.49□□□□□ -0.57
KARS-207ENST00000566560 SPO11Q9Y5K1 396 aa11.49□□□□□ -0.57
KARS-207ENST00000566560 GON4LQ3T8J9 2241 aa11.49□□□□□ -0.57
KARS-207ENST00000566560 A0A0U1RQS6 177 aa11.48□□□□□ -0.57
KARS-207ENST00000566560 TCRBV7S3A2A0A539 114 aa11.48□□□□□ -0.57
KARS-207ENST00000566560 GOLGA8MH3BSY2 632 aa11.48□□□□□ -0.57
KARS-207ENST00000566560 PSMD11O00231 422 aa11.48□□□□□ -0.57
KARS-207ENST00000566560 NDC80O14777 642 aa11.48□□□□□ -0.57
KARS-207ENST00000566560 LZTS3O60299 673 aaPredicted RBP11.48□□□□□ -0.57
KARS-207ENST00000566560 TM7SF2O76062 418 aa11.48□□□□□ -0.57
KARS-207ENST00000566560 RHOBTB1O94844 696 aa11.48□□□□□ -0.57
KARS-207ENST00000566560 SEC31AO94979 1220 aaKnown RBP11.48□□□□□ -0.57
KARS-207ENST00000566560 IGHV4-34P06331 123 aa11.48□□□□□ -0.57
KARS-207ENST00000566560 C1SP09871 688 aa11.48□□□□□ -0.57
KARS-207ENST00000566560 GRIA1P42261 906 aa11.48□□□□□ -0.57
KARS-207ENST00000566560 DHPSP49366 369 aaPredicted RBP11.48□□□□□ -0.57
KARS-207ENST00000566560 CCR5P51681 352 aa11.48□□□□□ -0.57
KARS-207ENST00000566560 SARNPP82979 210 aaKnown RBP11.48□□□□□ -0.57
KARS-207ENST00000566560 SEPT6Q14141 434 aa11.48□□□□□ -0.57
KARS-207ENST00000566560 ACOX1Q15067 660 aa11.48□□□□□ -0.57
KARS-207ENST00000566560 ZNF284Q2VY69 593 aa11.48□□□□□ -0.57
KARS-207ENST00000566560 PLK5Q496M5 336 aa11.48□□□□□ -0.57
KARS-207ENST00000566560 SETMARQ53H47 684 aaPredicted RBP11.48□□□□□ -0.57
KARS-207ENST00000566560 LYSMD4Q5XG99 296 aa11.48□□□□□ -0.57
KARS-207ENST00000566560 DENND5AQ6IQ26 1287 aa11.48□□□□□ -0.57
KARS-207ENST00000566560 LIPIQ6XZB0 460 aa11.48□□□□□ -0.57
KARS-207ENST00000566560 ZNF534Q76KX8 674 aa11.48□□□□□ -0.57
KARS-207ENST00000566560 PCGF5Q86SE9 256 aa11.48□□□□□ -0.57
KARS-207ENST00000566560 HOOK3Q86VS8 718 aa11.48□□□□□ -0.57
KARS-207ENST00000566560 SLC41A1Q8IVJ1 513 aa11.48□□□□□ -0.57
KARS-207ENST00000566560 LRRN4CLQ8ND94 238 aa11.48□□□□□ -0.57
KARS-207ENST00000566560 BIRC7Q96CA5 298 aa11.48□□□□□ -0.57
KARS-207ENST00000566560 ERP44Q9BS26 406 aa11.48□□□□□ -0.57
KARS-207ENST00000566560 LRRC1Q9BTT6 524 aa11.48□□□□□ -0.57
KARS-207ENST00000566560 GPR63Q9BZJ6 419 aa11.48□□□□□ -0.57
KARS-207ENST00000566560 IRF2BPLQ9H1B7 796 aa11.48□□□□□ -0.57
KARS-207ENST00000566560 DUSP15Q9H1R2 295 aaPredicted RBP11.48□□□□□ -0.57
KARS-207ENST00000566560 EPC1Q9H2F5 836 aa11.48□□□□□ -0.57
KARS-207ENST00000566560 DPH5Q9H2P9 285 aa11.48□□□□□ -0.57
KARS-207ENST00000566560 TRABDQ9H4I3 376 aa11.48□□□□□ -0.57
KARS-207ENST00000566560 ZFYVE1Q9HBF4 777 aa11.48□□□□□ -0.57
KARS-207ENST00000566560 ARNT2Q9HBZ2 717 aa11.48□□□□□ -0.57
KARS-207ENST00000566560 MAGEE1Q9HCI5 957 aa11.48□□□□□ -0.57
KARS-207ENST00000566560 CASS4Q9NQ75 786 aa11.48□□□□□ -0.57
KARS-207ENST00000566560 PLA2G2EQ9NZK7 142 aa11.48□□□□□ -0.57
KARS-207ENST00000566560 COQ6Q9Y2Z9 468 aa11.48□□□□□ -0.57
KARS-207ENST00000566560 TP53BP1Q12888 1972 aaPredicted RBP11.48□□□□□ -0.57
KARS-207ENST00000566560 ATXN2Q99700 1313 aaKnown RBP11.47□□□□□ -0.57
KARS-207ENST00000566560 IGLON5A6NGN9 336 aa11.47□□□□□ -0.57
KARS-207ENST00000566560 METTL12A8MUP2 240 aa11.47□□□□□ -0.57
KARS-207ENST00000566560 C10orf142B7Z368 130 aa11.47□□□□□ -0.57
KARS-207ENST00000566560 LATO43561 262 aa11.47□□□□□ -0.57
KARS-207ENST00000566560 CLDN7O95471 211 aa11.47□□□□□ -0.57
KARS-207ENST00000566560 IVDP26440 423 aa11.47□□□□□ -0.57
KARS-207ENST00000566560 PTGER3P43115 390 aa11.47□□□□□ -0.57
KARS-207ENST00000566560 RPL21P46778 160 aaKnown RBP11.47□□□□□ -0.57
KARS-207ENST00000566560 STC1P52823 247 aa11.47□□□□□ -0.57
KARS-207ENST00000566560 ITGA8P53708 1063 aa11.47□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 64.5 ms