RNA–Protein interactions for RNA: ENST00000566549.5

MSLN-207, Transcript of mesothelin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MSLN, Length 2,418 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSLN-207ENST00000566549 GSTO2Q9H4Y5 243 aa18.73■□□□□ 0.59
MSLN-207ENST00000566549 BATF3Q9NR55 127 aa18.73■□□□□ 0.59
MSLN-207ENST00000566549 FAM50BQ9Y247 325 aa18.73■□□□□ 0.59
MSLN-207ENST00000566549 ATP6AP2A0A1C7CYW4 349 aa18.72■□□□□ 0.59
MSLN-207ENST00000566549 LRRC14BA6NHZ5 514 aa18.72■□□□□ 0.59
MSLN-207ENST00000566549 ATP6AP2O75787 350 aa18.72■□□□□ 0.59
MSLN-207ENST00000566549 HMGA1P17096 107 aaKnown RBP18.72■□□□□ 0.59
MSLN-207ENST00000566549 FDXRP22570 491 aa18.72■□□□□ 0.59
MSLN-207ENST00000566549 ACVR1Q04771 509 aa18.72■□□□□ 0.59
MSLN-207ENST00000566549 FBXO48Q5FWF7 155 aa18.72■□□□□ 0.59
MSLN-207ENST00000566549 ACBD5Q5T8D3 534 aaPredicted RBP18.72■□□□□ 0.59
MSLN-207ENST00000566549 GALNT7Q86SF2 657 aa18.72■□□□□ 0.59
MSLN-207ENST00000566549 CEP70Q8NHQ1 597 aa18.72■□□□□ 0.59
MSLN-207ENST00000566549 TMA16Q96EY4 203 aaKnown RBP18.72■□□□□ 0.59
MSLN-207ENST00000566549 CDKN2AIPNLQ96HQ2 116 aa18.72■□□□□ 0.59
MSLN-207ENST00000566549 MAELQ96JY0 434 aaKnown RBP18.72■□□□□ 0.59
MSLN-207ENST00000566549 ZNF599Q96NL3 588 aa18.72■□□□□ 0.59
MSLN-207ENST00000566549 PSKH2Q96QS6 385 aa18.72■□□□□ 0.59
MSLN-207ENST00000566549 CLSTN3Q9BQT9 956 aa18.72■□□□□ 0.59
MSLN-207ENST00000566549 MUC3BQ9H195 1237 aa18.72■□□□□ 0.59
MSLN-207ENST00000566549 HIPK3Q9H422 1215 aa18.72■□□□□ 0.59
MSLN-207ENST00000566549 EML4Q9HC35 981 aaKnown RBP18.72■□□□□ 0.59
MSLN-207ENST00000566549 SCUBE2Q9NQ36 999 aa18.72■□□□□ 0.59
MSLN-207ENST00000566549 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP18.72■□□□□ 0.59
MSLN-207ENST00000566549 H3BMM5 538 aa18.72■□□□□ 0.59
MSLN-207ENST00000566549 PITPNM1O00562 1244 aa18.72■□□□□ 0.59
MSLN-207ENST00000566549 SIX3O95343 332 aaPredicted RBP18.72■□□□□ 0.59
MSLN-207ENST00000566549 WISP3O95389 354 aaPredicted RBP18.72■□□□□ 0.59
MSLN-207ENST00000566549 CD1DP15813 335 aa18.72■□□□□ 0.59
MSLN-207ENST00000566549 FMO4P31512 558 aa18.72■□□□□ 0.59
MSLN-207ENST00000566549 CDKN1CP49918 316 aaPredicted RBP18.72■□□□□ 0.59
MSLN-207ENST00000566549 ZNF177Q13360 481 aaPredicted RBP18.72■□□□□ 0.59
MSLN-207ENST00000566549 SPOUT1Q5T280 376 aaKnown RBP18.72■□□□□ 0.59
MSLN-207ENST00000566549 FAM117BQ6P1L5 589 aa18.72■□□□□ 0.59
MSLN-207ENST00000566549 SDCCAG8Q86SQ7 713 aaPredicted RBP18.72■□□□□ 0.59
MSLN-207ENST00000566549 MDGA1Q8NFP4 955 aa18.72■□□□□ 0.59
MSLN-207ENST00000566549 CDK5RAP1Q96SZ6 601 aaKnown RBP18.72■□□□□ 0.59
MSLN-207ENST00000566549 ADAMTS6Q9UKP5 1117 aa18.72■□□□□ 0.59
MSLN-207ENST00000566549 AGO1Q9UL18 857 aaKnown RBP18.72■□□□□ 0.59
MSLN-207ENST00000566549 LRCH1Q9Y2L9 728 aa18.72■□□□□ 0.59
MSLN-207ENST00000566549 CCDC189A1A4V9 331 aa18.71■□□□□ 0.59
MSLN-207ENST00000566549 UBXN8O00124 270 aa18.71■□□□□ 0.59
MSLN-207ENST00000566549 PPP6CO00743 305 aa18.71■□□□□ 0.59
MSLN-207ENST00000566549 INSIG1O15503 277 aa18.71■□□□□ 0.59
MSLN-207ENST00000566549 EPOP01588 193 aa18.71■□□□□ 0.59
MSLN-207ENST00000566549 STC1P52823 247 aa18.71■□□□□ 0.59
MSLN-207ENST00000566549 THOP1P52888 689 aa18.71■□□□□ 0.59
MSLN-207ENST00000566549 PDAP1Q13442 181 aaKnown RBP18.71■□□□□ 0.59
MSLN-207ENST00000566549 C5orf22Q49AR2 442 aa18.71■□□□□ 0.59
MSLN-207ENST00000566549 RNF219Q5W0B1 726 aaPredicted RBP18.71■□□□□ 0.59
MSLN-207ENST00000566549 LPCAT4Q643R3 524 aa18.71■□□□□ 0.59
MSLN-207ENST00000566549 C16orf89Q6UX73 402 aa18.71■□□□□ 0.59
MSLN-207ENST00000566549 DHDDSQ86SQ9 333 aa18.71■□□□□ 0.59
MSLN-207ENST00000566549 SLC22A9Q8IVM8 553 aa18.71■□□□□ 0.59
MSLN-207ENST00000566549 EFHBQ8N7U6 833 aa18.71■□□□□ 0.59
MSLN-207ENST00000566549 TRPM5Q9NZQ8 1165 aa18.71■□□□□ 0.59
MSLN-207ENST00000566549 KDELR3O43731 214 aa18.71■□□□□ 0.59
MSLN-207ENST00000566549 SNAP91O60641 907 aa18.71■□□□□ 0.59
MSLN-207ENST00000566549 CLDN11O75508 207 aa18.71■□□□□ 0.59
MSLN-207ENST00000566549 RAG1P15918 1043 aa18.71■□□□□ 0.59
MSLN-207ENST00000566549 HDCP19113 662 aa18.71■□□□□ 0.59
MSLN-207ENST00000566549 IMPDH1P20839 514 aa18.71■□□□□ 0.59
MSLN-207ENST00000566549 DPP6P42658 865 aa18.71■□□□□ 0.59
MSLN-207ENST00000566549 ART3Q13508 389 aa18.71■□□□□ 0.59
MSLN-207ENST00000566549 OR4D1Q15615 310 aa18.71■□□□□ 0.59
MSLN-207ENST00000566549 CMPK2Q5EBM0 449 aa18.71■□□□□ 0.59
MSLN-207ENST00000566549 ZNF678Q5SXM1 525 aa18.71■□□□□ 0.59
MSLN-207ENST00000566549 ARMC3Q5W041 872 aa18.71■□□□□ 0.59
MSLN-207ENST00000566549 PTGR2Q8N8N7 351 aaPredicted RBP18.71■□□□□ 0.59
MSLN-207ENST00000566549 ZNF296Q8WUU4 475 aaPredicted RBP18.71■□□□□ 0.59
MSLN-207ENST00000566549 DEFB118Q96PH6 123 aa18.71■□□□□ 0.59
MSLN-207ENST00000566549 BPIFA1Q9NP55 256 aa18.71■□□□□ 0.59
MSLN-207ENST00000566549 POLR3BQ9NW08 1133 aaPredicted RBP18.71■□□□□ 0.59
MSLN-207ENST00000566549 GREB1Q4ZG55 1949 aa18.7■□□□□ 0.58
MSLN-207ENST00000566549 ZNF37AP17032 561 aaPredicted RBP18.7■□□□□ 0.58
MSLN-207ENST00000566549 TCN1P20061 433 aaPredicted RBP18.7■□□□□ 0.58
MSLN-207ENST00000566549 DSG1Q02413 1049 aa18.7■□□□□ 0.58
MSLN-207ENST00000566549 KLC1Q07866 573 aa18.7■□□□□ 0.58
MSLN-207ENST00000566549 CYTH1Q15438 398 aa18.7■□□□□ 0.58
MSLN-207ENST00000566549 PFKFB4Q16877 469 aa18.7■□□□□ 0.58
MSLN-207ENST00000566549 ALG1LQ6GMV1 187 aa18.7■□□□□ 0.58
MSLN-207ENST00000566549 AAGABQ6PD74 315 aa18.7■□□□□ 0.58
MSLN-207ENST00000566549 BNC2Q6ZN30 1099 aaPredicted RBP18.7■□□□□ 0.58
MSLN-207ENST00000566549 WDR41Q9HAD4 459 aa18.7■□□□□ 0.58
MSLN-207ENST00000566549 TRPC7Q9HCX4 862 aa18.7■□□□□ 0.58
MSLN-207ENST00000566549 TRAF6Q9Y4K3 522 aa18.7■□□□□ 0.58
MSLN-207ENST00000566549 RHOBTB1O94844 696 aa18.7■□□□□ 0.58
MSLN-207ENST00000566549 CRTAMO95727 393 aa18.7■□□□□ 0.58
MSLN-207ENST00000566549 PRLP01236 227 aa18.7■□□□□ 0.58
MSLN-207ENST00000566549 XRCC1P18887 633 aaPredicted RBP18.7■□□□□ 0.58
MSLN-207ENST00000566549 ZNF140P52738 457 aaPredicted RBP18.7■□□□□ 0.58
MSLN-207ENST00000566549 CDC16Q13042 620 aa18.7■□□□□ 0.58
MSLN-207ENST00000566549 GEN1Q17RS7 908 aa18.7■□□□□ 0.58
MSLN-207ENST00000566549 UNC50Q53HI1 259 aa18.7■□□□□ 0.58
MSLN-207ENST00000566549 AFAP1L2Q8N4X5 818 aa18.7■□□□□ 0.58
MSLN-207ENST00000566549 PDZD8Q8NEN9 1154 aa18.7■□□□□ 0.58
MSLN-207ENST00000566549 AUTS2Q8WXX7 1259 aa18.7■□□□□ 0.58
MSLN-207ENST00000566549 MIEF2Q96C03 454 aa18.7■□□□□ 0.58
MSLN-207ENST00000566549 IGSF21Q96ID5 467 aa18.7■□□□□ 0.58
MSLN-207ENST00000566549 TDRD1Q9BXT4 1180 aaKnown RBP18.7■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms