RNA–Protein interactions for RNA: ENST00000566347.5

CLN6-207, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 1 (best) BASIC

Gene CLN6, Length 981 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-207ENST00000566347 MAP7D3Q8IWC1 876 aa20.19■□□□□ 0.82
CLN6-207ENST00000566347 SPACA3Q8IXA5 215 aa20.19■□□□□ 0.82
CLN6-207ENST00000566347 NDUFAF2Q8N183 169 aa20.19■□□□□ 0.82
CLN6-207ENST00000566347 KCTD6Q8NC69 237 aa20.19■□□□□ 0.82
CLN6-207ENST00000566347 CCDC74AQ96AQ1 378 aa20.19■□□□□ 0.82
CLN6-207ENST00000566347 SCRN2Q96FV2 425 aa20.19■□□□□ 0.82
CLN6-207ENST00000566347 MCCC1Q96RQ3 725 aaPredicted RBP20.19■□□□□ 0.82
CLN6-207ENST00000566347 ZNF670Q9BS34 389 aa20.19■□□□□ 0.82
CLN6-207ENST00000566347 POLR1EQ9GZS1 481 aaKnown RBP20.19■□□□□ 0.82
CLN6-207ENST00000566347 ASCL3Q9NQ33 180 aa20.19■□□□□ 0.82
CLN6-207ENST00000566347 PHPT1Q9NRX4 125 aaPredicted RBP20.19■□□□□ 0.82
CLN6-207ENST00000566347 MFSD11O43934 449 aa20.18■□□□□ 0.82
CLN6-207ENST00000566347 KRT7P08729 469 aa20.18■□□□□ 0.82
CLN6-207ENST00000566347 CES1P23141 567 aa20.18■□□□□ 0.82
CLN6-207ENST00000566347 GJC1P36383 396 aa20.18■□□□□ 0.82
CLN6-207ENST00000566347 MLLT3P42568 568 aaPredicted RBP20.18■□□□□ 0.82
CLN6-207ENST00000566347 TRIM14Q14142 442 aa20.18■□□□□ 0.82
CLN6-207ENST00000566347 ANKRD20A8PQ5CZ79 823 aa20.18■□□□□ 0.82
CLN6-207ENST00000566347 DENND2CQ68D51 928 aa20.18■□□□□ 0.82
CLN6-207ENST00000566347 NCBP2-AS2Q69YL0 99 aa20.18■□□□□ 0.82
CLN6-207ENST00000566347 CBARPQ8N350 705 aaPredicted RBP20.18■□□□□ 0.82
CLN6-207ENST00000566347 FAM46DQ8NEK8 389 aa20.18■□□□□ 0.82
CLN6-207ENST00000566347 GPR156Q8NFN8 814 aa20.18■□□□□ 0.82
CLN6-207ENST00000566347 WDR36Q8NI36 951 aaKnown RBP20.18■□□□□ 0.82
CLN6-207ENST00000566347 FATE1Q969F0 183 aa20.18■□□□□ 0.82
CLN6-207ENST00000566347 DTD2Q96FN9 168 aa20.18■□□□□ 0.82
CLN6-207ENST00000566347 SLC46A1Q96NT5 459 aa20.18■□□□□ 0.82
CLN6-207ENST00000566347 UBL7Q96S82 380 aaPredicted RBP20.18■□□□□ 0.82
CLN6-207ENST00000566347 SEMA3CQ99985 751 aa20.18■□□□□ 0.82
CLN6-207ENST00000566347 LGR4Q9BXB1 951 aa20.18■□□□□ 0.82
CLN6-207ENST00000566347 CYP4F12Q9HCS2 524 aa20.18■□□□□ 0.82
CLN6-207ENST00000566347 MRPL40Q9NQ50 206 aaKnown RBP20.18■□□□□ 0.82
CLN6-207ENST00000566347 AMACRQ9UHK6 382 aa20.18■□□□□ 0.82
CLN6-207ENST00000566347 MOSPD1Q9UJG1 213 aa20.18■□□□□ 0.82
CLN6-207ENST00000566347 PPIL1Q9Y3C6 166 aa20.18■□□□□ 0.82
CLN6-207ENST00000566347 RAI2Q9Y5P3 530 aa20.18■□□□□ 0.82
CLN6-207ENST00000566347 PRSS38A1L453 326 aa20.17■□□□□ 0.82
CLN6-207ENST00000566347 NPIPB15A6NHN6 443 aaPredicted RBP20.17■□□□□ 0.82
CLN6-207ENST00000566347 TMX2-CTNND1H3BSU7 103 aa20.17■□□□□ 0.82
CLN6-207ENST00000566347 CBFA2T2O43439 604 aa20.17■□□□□ 0.82
CLN6-207ENST00000566347 LHCGRP22888 699 aa20.17■□□□□ 0.82
CLN6-207ENST00000566347 TEAD1P28347 426 aa20.17■□□□□ 0.82
CLN6-207ENST00000566347 ETV3P41162 512 aa20.17■□□□□ 0.82
CLN6-207ENST00000566347 ITKQ08881 620 aa20.17■□□□□ 0.82
CLN6-207ENST00000566347 IFI16Q16666 785 aaKnown RBP20.17■□□□□ 0.82
CLN6-207ENST00000566347 BROXQ5VW32 411 aa20.17■□□□□ 0.82
CLN6-207ENST00000566347 SPECC1LQ69YQ0 1117 aa20.17■□□□□ 0.82
CLN6-207ENST00000566347 OGFOD3Q6PK18 319 aa20.17■□□□□ 0.82
CLN6-207ENST00000566347 HSD11B1LQ7Z5J1 315 aa20.17■□□□□ 0.82
CLN6-207ENST00000566347 HEATR4Q86WZ0 1026 aa20.17■□□□□ 0.82
CLN6-207ENST00000566347 PELI3Q8N2H9 469 aa20.17■□□□□ 0.82
CLN6-207ENST00000566347 ARL14Q8N4G2 192 aa20.17■□□□□ 0.82
CLN6-207ENST00000566347 OR8K1Q8NGG5 319 aa20.17■□□□□ 0.82
CLN6-207ENST00000566347 MAML1Q92585 1016 aa20.17■□□□□ 0.82
CLN6-207ENST00000566347 FCRL3Q96P31 734 aaPredicted RBP20.17■□□□□ 0.82
CLN6-207ENST00000566347 GFM1Q96RP9 751 aaKnown RBP20.17■□□□□ 0.82
CLN6-207ENST00000566347 TEX101Q9BY14 249 aa20.17■□□□□ 0.82
CLN6-207ENST00000566347 TMEM168Q9H0V1 697 aa20.17■□□□□ 0.82
CLN6-207ENST00000566347 DEF6Q9H4E7 631 aa20.17■□□□□ 0.82
CLN6-207ENST00000566347 RABGEF1Q9UJ41 708 aa20.17■□□□□ 0.82
CLN6-207ENST00000566347 CCDC187A0A096LP49 1063 aa20.16■□□□□ 0.82
CLN6-207ENST00000566347 A0A1W2PNU3 283 aaPredicted RBP20.16■□□□□ 0.82
CLN6-207ENST00000566347 EIF4E1BA6NMX2 242 aaKnown RBP20.16■□□□□ 0.82
CLN6-207ENST00000566347 MATN3O15232 486 aa20.16■□□□□ 0.82
CLN6-207ENST00000566347 PNLIPP16233 465 aa20.16■□□□□ 0.82
CLN6-207ENST00000566347 GLB1P16278 677 aa20.16■□□□□ 0.82
CLN6-207ENST00000566347 MX2P20592 715 aa20.16■□□□□ 0.82
CLN6-207ENST00000566347 CCNCP24863 283 aa20.16■□□□□ 0.82
CLN6-207ENST00000566347 MAN1A1P33908 653 aa20.16■□□□□ 0.82
CLN6-207ENST00000566347 PDX1P52945 283 aa20.16■□□□□ 0.82
CLN6-207ENST00000566347 UCNP55089 124 aa20.16■□□□□ 0.82
CLN6-207ENST00000566347 COL9A2Q14055 689 aaPredicted RBP20.16■□□□□ 0.82
CLN6-207ENST00000566347 SKOR2Q2VWA4 1001 aaPredicted RBP20.16■□□□□ 0.82
CLN6-207ENST00000566347 ATP13A4Q4VNC1 1196 aa20.16■□□□□ 0.82
CLN6-207ENST00000566347 CERCAMQ5T4B2 595 aa20.16■□□□□ 0.82
CLN6-207ENST00000566347 ALG1LQ6GMV1 187 aa20.16■□□□□ 0.82
CLN6-207ENST00000566347 KIAA1524Q8TCG1 905 aa20.16■□□□□ 0.82
CLN6-207ENST00000566347 PIH1D2Q8WWB5 315 aa20.16■□□□□ 0.82
CLN6-207ENST00000566347 KCNE4Q8WWG9 221 aa20.16■□□□□ 0.82
CLN6-207ENST00000566347 FAF2Q96CS3 445 aa20.16■□□□□ 0.82
CLN6-207ENST00000566347 LIN37Q96GY3 246 aaPredicted RBP20.16■□□□□ 0.82
CLN6-207ENST00000566347 TSGA13Q96PP4 275 aa20.16■□□□□ 0.82
CLN6-207ENST00000566347 DNAJC7Q99615 494 aa20.16■□□□□ 0.82
CLN6-207ENST00000566347 DPH1Q9BZG8 443 aa20.16■□□□□ 0.82
CLN6-207ENST00000566347 CARS2Q9HA77 564 aaKnown RBP20.16■□□□□ 0.82
CLN6-207ENST00000566347 ZNHIT6Q9NWK9 470 aaKnown RBP20.16■□□□□ 0.82
CLN6-207ENST00000566347 APPL1Q9UKG1 709 aa20.16■□□□□ 0.82
CLN6-207ENST00000566347 FASNP49327 2511 aaKnown RBP20.16■□□□□ 0.82
CLN6-207ENST00000566347 KIF26BQ2KJY2 2108 aa20.15■□□□□ 0.82
CLN6-207ENST00000566347 SSU72P8A0A1W2PR75 194 aa20.15■□□□□ 0.82
CLN6-207ENST00000566347 D6RAR5 112 aa20.15■□□□□ 0.82
CLN6-207ENST00000566347 FZD6O60353 706 aa20.15■□□□□ 0.82
CLN6-207ENST00000566347 RPLP0P05388 317 aaKnown RBP20.15■□□□□ 0.82
CLN6-207ENST00000566347 TPM1P09493 284 aa20.15■□□□□ 0.82
CLN6-207ENST00000566347 CA4P22748 312 aa20.15■□□□□ 0.82
CLN6-207ENST00000566347 CCL7P80098 99 aa20.15■□□□□ 0.82
CLN6-207ENST00000566347 CDK3Q00526 305 aa20.15■□□□□ 0.82
CLN6-207ENST00000566347 DPTQ07507 201 aa20.15■□□□□ 0.82
CLN6-207ENST00000566347 EIF3IQ13347 325 aaKnown RBP20.15■□□□□ 0.82
CLN6-207ENST00000566347 C14orf28Q4W4Y0 310 aa20.15■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 54.6 ms