RNA–Protein interactions for RNA: ENST00000565471.6

CLN6-206, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 2 BASIC

Gene CLN6, Length 1,075 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-206ENST00000565471 ANKRD20A8PQ5CZ79 823 aa19.89■□□□□ 0.77
CLN6-206ENST00000565471 C3orf38Q5JPI3 329 aa19.89■□□□□ 0.77
CLN6-206ENST00000565471 SPECC1LQ69YQ0 1117 aa19.89■□□□□ 0.77
CLN6-206ENST00000565471 ALG1LQ6GMV1 187 aa19.89■□□□□ 0.77
CLN6-206ENST00000565471 OGFOD3Q6PK18 319 aa19.89■□□□□ 0.77
CLN6-206ENST00000565471 USP45Q70EL2 814 aa19.89■□□□□ 0.77
CLN6-206ENST00000565471 MAP7D3Q8IWC1 876 aa19.89■□□□□ 0.77
CLN6-206ENST00000565471 PELI3Q8N2H9 469 aa19.89■□□□□ 0.77
CLN6-206ENST00000565471 KCTD6Q8NC69 237 aa19.89■□□□□ 0.77
CLN6-206ENST00000565471 GPR156Q8NFN8 814 aa19.89■□□□□ 0.77
CLN6-206ENST00000565471 NBEAQ8NFP9 2946 aa19.89■□□□□ 0.77
CLN6-206ENST00000565471 OR8K1Q8NGG5 319 aa19.89■□□□□ 0.77
CLN6-206ENST00000565471 PIH1D2Q8WWB5 315 aa19.89■□□□□ 0.77
CLN6-206ENST00000565471 MAML1Q92585 1016 aa19.89■□□□□ 0.77
CLN6-206ENST00000565471 CCDC74AQ96AQ1 378 aa19.89■□□□□ 0.77
CLN6-206ENST00000565471 FAF2Q96CS3 445 aa19.89■□□□□ 0.77
CLN6-206ENST00000565471 SEMA3CQ99985 751 aa19.89■□□□□ 0.77
CLN6-206ENST00000565471 LGR4Q9BXB1 951 aa19.89■□□□□ 0.77
CLN6-206ENST00000565471 TEX101Q9BY14 249 aa19.89■□□□□ 0.77
CLN6-206ENST00000565471 PRORYQ9H606 182 aa19.89■□□□□ 0.77
CLN6-206ENST00000565471 NT5MQ9NPB1 228 aa19.89■□□□□ 0.77
CLN6-206ENST00000565471 MRPL40Q9NQ50 206 aaKnown RBP19.89■□□□□ 0.77
CLN6-206ENST00000565471 PHPT1Q9NRX4 125 aaPredicted RBP19.89■□□□□ 0.77
CLN6-206ENST00000565471 THSD1Q9NS62 852 aa19.89■□□□□ 0.77
CLN6-206ENST00000565471 AMACRQ9UHK6 382 aa19.89■□□□□ 0.77
CLN6-206ENST00000565471 SATB2Q9UPW6 733 aa19.89■□□□□ 0.77
CLN6-206ENST00000565471 PCDHGA8Q9Y5G5 932 aa19.89■□□□□ 0.77
CLN6-206ENST00000565471 MATN3O15232 486 aa19.88■□□□□ 0.77
CLN6-206ENST00000565471 FZD6O60353 706 aa19.88■□□□□ 0.77
CLN6-206ENST00000565471 KRT10P13645 584 aa19.88■□□□□ 0.77
CLN6-206ENST00000565471 CES1P23141 567 aa19.88■□□□□ 0.77
CLN6-206ENST00000565471 CCNCP24863 283 aa19.88■□□□□ 0.77
CLN6-206ENST00000565471 GJC1P36383 396 aa19.88■□□□□ 0.77
CLN6-206ENST00000565471 PDX1P52945 283 aa19.88■□□□□ 0.77
CLN6-206ENST00000565471 TAS2R40P59535 323 aa19.88■□□□□ 0.77
CLN6-206ENST00000565471 TLE3Q04726 772 aa19.88■□□□□ 0.77
CLN6-206ENST00000565471 CCDC173Q0VFZ6 552 aa19.88■□□□□ 0.77
CLN6-206ENST00000565471 ARHGEF7Q14155 803 aa19.88■□□□□ 0.77
CLN6-206ENST00000565471 IFI16Q16666 785 aaKnown RBP19.88■□□□□ 0.77
CLN6-206ENST00000565471 HSD11B1LQ7Z5J1 315 aa19.88■□□□□ 0.77
CLN6-206ENST00000565471 TAF8Q7Z7C8 310 aa19.88■□□□□ 0.77
CLN6-206ENST00000565471 CPNE8Q86YQ8 564 aa19.88■□□□□ 0.77
CLN6-206ENST00000565471 SPACA3Q8IXA5 215 aa19.88■□□□□ 0.77
CLN6-206ENST00000565471 NDUFAF2Q8N183 169 aa19.88■□□□□ 0.77
CLN6-206ENST00000565471 TSGA13Q96PP4 275 aa19.88■□□□□ 0.77
CLN6-206ENST00000565471 LGMNQ99538 433 aa19.88■□□□□ 0.77
CLN6-206ENST00000565471 PACSIN1Q9BY11 444 aa19.88■□□□□ 0.77
CLN6-206ENST00000565471 HAUS2Q9NVX0 235 aa19.88■□□□□ 0.77
CLN6-206ENST00000565471 RAI2Q9Y5P3 530 aa19.88■□□□□ 0.77
CLN6-206ENST00000565471 LAMA5O15230 3695 aa19.88■□□□□ 0.77
CLN6-206ENST00000565471 A0A1W2PNU3 283 aaPredicted RBP19.87■□□□□ 0.77
CLN6-206ENST00000565471 PRSS38A1L453 326 aa19.87■□□□□ 0.77
CLN6-206ENST00000565471 TMEM253P0C7T8 217 aa19.87■□□□□ 0.77
CLN6-206ENST00000565471 ETV3P41162 512 aa19.87■□□□□ 0.77
CLN6-206ENST00000565471 MLLT3P42568 568 aaPredicted RBP19.87■□□□□ 0.77
CLN6-206ENST00000565471 DENND2CQ68D51 928 aa19.87■□□□□ 0.77
CLN6-206ENST00000565471 HEATR4Q86WZ0 1026 aa19.87■□□□□ 0.77
CLN6-206ENST00000565471 FAM46DQ8NEK8 389 aa19.87■□□□□ 0.77
CLN6-206ENST00000565471 WDR36Q8NI36 951 aaKnown RBP19.87■□□□□ 0.77
CLN6-206ENST00000565471 SLC46A1Q96NT5 459 aa19.87■□□□□ 0.77
CLN6-206ENST00000565471 TMEM168Q9H0V1 697 aa19.87■□□□□ 0.77
CLN6-206ENST00000565471 DEF6Q9H4E7 631 aa19.87■□□□□ 0.77
CLN6-206ENST00000565471 CYP4F12Q9HCS2 524 aa19.87■□□□□ 0.77
CLN6-206ENST00000565471 RABGEF1Q9UJ41 708 aa19.87■□□□□ 0.77
CLN6-206ENST00000565471 CASC3O15234 703 aaKnown RBP19.86■□□□□ 0.77
CLN6-206ENST00000565471 PDHA1P08559 390 aa19.86■□□□□ 0.77
CLN6-206ENST00000565471 PNLIPP16233 465 aa19.86■□□□□ 0.77
CLN6-206ENST00000565471 GLB1P16278 677 aa19.86■□□□□ 0.77
CLN6-206ENST00000565471 MX2P20592 715 aa19.86■□□□□ 0.77
CLN6-206ENST00000565471 RBMS1P29558 406 aaKnown RBP19.86■□□□□ 0.77
CLN6-206ENST00000565471 CDK3Q00526 305 aa19.86■□□□□ 0.77
CLN6-206ENST00000565471 DPTQ07507 201 aa19.86■□□□□ 0.77
CLN6-206ENST00000565471 ITKQ08881 620 aa19.86■□□□□ 0.77
CLN6-206ENST00000565471 CERCAMQ5T4B2 595 aa19.86■□□□□ 0.77
CLN6-206ENST00000565471 Q6ZVL8 140 aa19.86■□□□□ 0.77
CLN6-206ENST00000565471 TECPR1Q7Z6L1 1165 aa19.86■□□□□ 0.77
CLN6-206ENST00000565471 TSPAN33Q86UF1 283 aa19.86■□□□□ 0.77
CLN6-206ENST00000565471 PQLC3Q8N755 202 aa19.86■□□□□ 0.77
CLN6-206ENST00000565471 LIN37Q96GY3 246 aaPredicted RBP19.86■□□□□ 0.77
CLN6-206ENST00000565471 PRR11Q96HE9 360 aaPredicted RBP19.86■□□□□ 0.77
CLN6-206ENST00000565471 GFM1Q96RP9 751 aaKnown RBP19.86■□□□□ 0.77
CLN6-206ENST00000565471 UBL7Q96S82 380 aaPredicted RBP19.86■□□□□ 0.77
CLN6-206ENST00000565471 FRMD8Q9BZ67 464 aaPredicted RBP19.86■□□□□ 0.77
CLN6-206ENST00000565471 SYNDIG1Q9H7V2 258 aa19.86■□□□□ 0.77
CLN6-206ENST00000565471 RBM22Q9NW64 420 aaKnown RBP eCLIP19.86■□□□□ 0.77
CLN6-206ENST00000565471 ZNHIT6Q9NWK9 470 aaKnown RBP19.86■□□□□ 0.77
CLN6-206ENST00000565471 MOSPD1Q9UJG1 213 aa19.86■□□□□ 0.77
CLN6-206ENST00000565471 APPL1Q9UKG1 709 aa19.86■□□□□ 0.77
CLN6-206ENST00000565471 PTPRQQ9UMZ3 2332 aa19.85■□□□□ 0.77
CLN6-206ENST00000565471 CCDC187A0A096LP49 1063 aa19.85■□□□□ 0.77
CLN6-206ENST00000565471 D6RAR5 112 aa19.85■□□□□ 0.77
CLN6-206ENST00000565471 TMX2-CTNND1H3BSU7 103 aa19.85■□□□□ 0.77
CLN6-206ENST00000565471 AKR1B10O60218 316 aa19.85■□□□□ 0.77
CLN6-206ENST00000565471 NOBOXO60393 691 aa19.85■□□□□ 0.77
CLN6-206ENST00000565471 CEACAM5P06731 702 aa19.85■□□□□ 0.77
CLN6-206ENST00000565471 ZNF30P17039 623 aa19.85■□□□□ 0.77
CLN6-206ENST00000565471 CTPS1P17812 591 aa19.85■□□□□ 0.77
CLN6-206ENST00000565471 EIF3IQ13347 325 aaKnown RBP19.85■□□□□ 0.77
CLN6-206ENST00000565471 C14orf28Q4W4Y0 310 aa19.85■□□□□ 0.77
CLN6-206ENST00000565471 GPBAR1Q8TDU6 330 aa19.85■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms