RNA–Protein interactions for RNA: ENST00000564582.2

CHD9-210, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 3

Gene CHD9, Length 968 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-210ENST00000564582 PANX3Q96QZ0 392 aa5.66□□□□□ -1.5
CHD9-210ENST00000564582 DOK1Q99704 481 aa5.66□□□□□ -1.5
CHD9-210ENST00000564582 CTRCQ99895 268 aa5.66□□□□□ -1.5
CHD9-210ENST00000564582 RTKNQ9BST9 563 aa5.66□□□□□ -1.5
CHD9-210ENST00000564582 CNPY3Q9BT09 278 aa5.66□□□□□ -1.5
CHD9-210ENST00000564582 ZHX3Q9H4I2 956 aa5.66□□□□□ -1.5
CHD9-210ENST00000564582 ZNF703Q9H7S9 590 aaPredicted RBP5.66□□□□□ -1.5
CHD9-210ENST00000564582 SPON1Q9HCB6 807 aa5.66□□□□□ -1.5
CHD9-210ENST00000564582 HMG20AQ9NP66 347 aa5.66□□□□□ -1.5
CHD9-210ENST00000564582 ARMC1Q9NVT9 282 aa5.66□□□□□ -1.5
CHD9-210ENST00000564582 ARHGEF38Q9NXL2 777 aa5.66□□□□□ -1.5
CHD9-210ENST00000564582 DDX56Q9NY93 547 aaKnown RBP5.66□□□□□ -1.5
CHD9-210ENST00000564582 TBC1D7Q9P0N9 293 aa5.66□□□□□ -1.5
CHD9-210ENST00000564582 MID2Q9UJV3 735 aa5.66□□□□□ -1.5
CHD9-210ENST00000564582 ANGPTL3Q9Y5C1 460 aa5.66□□□□□ -1.5
CHD9-210ENST00000564582 CEPT1Q9Y6K0 416 aa5.66□□□□□ -1.5
CHD9-210ENST00000564582 AFDNP55196 1824 aaKnown RBP5.66□□□□□ -1.5
CHD9-210ENST00000564582 ECM29Q5VYK3 1845 aa5.66□□□□□ -1.5
CHD9-210ENST00000564582 MYH1P12882 1939 aa5.66□□□□□ -1.5
CHD9-210ENST00000564582 CHD4Q14839 1912 aa5.66□□□□□ -1.5
CHD9-210ENST00000564582 KIF1AQ12756 1690 aa5.66□□□□□ -1.5
CHD9-210ENST00000564582 CAMTA1Q9Y6Y1 1673 aa5.66□□□□□ -1.5
CHD9-210ENST00000564582 WNK3Q9BYP7 1800 aa5.65□□□□□ -1.5
CHD9-210ENST00000564582 KLRG2A4D1S0 409 aaPredicted RBP5.65□□□□□ -1.5
CHD9-210ENST00000564582 FAM172BPA6NC97 362 aa5.65□□□□□ -1.5
CHD9-210ENST00000564582 TRIM64BA6NI03 449 aa5.65□□□□□ -1.5
CHD9-210ENST00000564582 LRRIQ4A6NIV6 560 aa5.65□□□□□ -1.5
CHD9-210ENST00000564582 TRIM64CA6NLI5 447 aa5.65□□□□□ -1.5
CHD9-210ENST00000564582 EVPLLA8MZ36 301 aa5.65□□□□□ -1.5
CHD9-210ENST00000564582 ERVV-1B6SEH8 477 aa5.65□□□□□ -1.5
CHD9-210ENST00000564582 SLCO1B7G3V0H7 640 aa5.65□□□□□ -1.5
CHD9-210ENST00000564582 COPEO14579 308 aa5.65□□□□□ -1.5
CHD9-210ENST00000564582 MATN3O15232 486 aa5.65□□□□□ -1.5
CHD9-210ENST00000564582 ZC3H11AO75152 810 aaKnown RBP eCLIP5.65□□□□□ -1.5
CHD9-210ENST00000564582 PRDM1O75626 825 aa5.65□□□□□ -1.5
CHD9-210ENST00000564582 GH1P01241 217 aa5.65□□□□□ -1.5
CHD9-210ENST00000564582 NR3C1P04150 777 aa5.65□□□□□ -1.5
CHD9-210ENST00000564582 RPLP2P05387 115 aaKnown RBP5.65□□□□□ -1.5
CHD9-210ENST00000564582 INHBAP08476 426 aa5.65□□□□□ -1.5
CHD9-210ENST00000564582 PLA2G4BP0C869 781 aa5.65□□□□□ -1.5
CHD9-210ENST00000564582 POLR2MP0CAP2 368 aa5.65□□□□□ -1.5
CHD9-210ENST00000564582 KRT3P12035 628 aa5.65□□□□□ -1.5
CHD9-210ENST00000564582 HOXB6P17509 224 aaKnown RBP5.65□□□□□ -1.5
CHD9-210ENST00000564582 NMT1P30419 496 aaKnown RBP5.65□□□□□ -1.5
CHD9-210ENST00000564582 IGHMBP2P38935 993 aaKnown RBP5.65□□□□□ -1.5
CHD9-210ENST00000564582 WASP42768 502 aa5.65□□□□□ -1.5
CHD9-210ENST00000564582 SERPINB10P48595 397 aa5.65□□□□□ -1.5
CHD9-210ENST00000564582 GSSP48637 474 aa5.65□□□□□ -1.5
CHD9-210ENST00000564582 FMO5P49326 533 aa5.65□□□□□ -1.5
CHD9-210ENST00000564582 NEK3P51956 506 aa5.65□□□□□ -1.5
CHD9-210ENST00000564582 RPS3AP61247 264 aaKnown RBP5.65□□□□□ -1.5
CHD9-210ENST00000564582 GSTO1P78417 241 aa5.65□□□□□ -1.5
CHD9-210ENST00000564582 CYP4A11Q02928 519 aa5.65□□□□□ -1.5
CHD9-210ENST00000564582 FOXE3Q13461 319 aa5.65□□□□□ -1.5
CHD9-210ENST00000564582 NAB1Q13506 487 aa5.65□□□□□ -1.5
CHD9-210ENST00000564582 RFTN1Q14699 578 aaPredicted RBP5.65□□□□□ -1.5
CHD9-210ENST00000564582 ZNF846Q147U1 533 aa5.65□□□□□ -1.5
CHD9-210ENST00000564582 PCBP2Q15366 365 aaKnown RBP eCLIP5.65□□□□□ -1.54e-6■□□□□ 8.6
CHD9-210ENST00000564582 TGFBIQ15582 683 aa5.65□□□□□ -1.5
CHD9-210ENST00000564582 CCDC142Q17RM4 750 aa5.65□□□□□ -1.5
CHD9-210ENST00000564582 INSCQ1MX18 579 aa5.65□□□□□ -1.5
CHD9-210ENST00000564582 TRIM16LQ309B1 348 aa5.65□□□□□ -1.5
CHD9-210ENST00000564582 BOLA3Q53S33 107 aa5.65□□□□□ -1.5
CHD9-210ENST00000564582 CAVIN4Q5BKX8 364 aa5.65□□□□□ -1.5
CHD9-210ENST00000564582 TCHHL1Q5QJ38 904 aaPredicted RBP5.65□□□□□ -1.5
CHD9-210ENST00000564582 CYP4A22Q5TCH4 519 aa5.65□□□□□ -1.5
CHD9-210ENST00000564582 DPY19L2P1Q6NXN4 242 aa5.65□□□□□ -1.5
CHD9-210ENST00000564582 EFCAB12Q6NXP0 572 aa5.65□□□□□ -1.5
CHD9-210ENST00000564582 RFWD3Q6PCD5 774 aa5.65□□□□□ -1.5
CHD9-210ENST00000564582 HEATR3Q7Z4Q2 680 aa5.65□□□□□ -1.5
CHD9-210ENST00000564582 ZBTB46Q86UZ6 589 aa5.65□□□□□ -1.5
CHD9-210ENST00000564582 XYLT1Q86Y38 959 aa5.65□□□□□ -1.5
CHD9-210ENST00000564582 ZNF444Q8N0Y2 327 aaPredicted RBP5.65□□□□□ -1.5
CHD9-210ENST00000564582 LSMEM2Q8N112 164 aa5.65□□□□□ -1.5
CHD9-210ENST00000564582 SIX6OS1Q8N1H7 587 aa5.65□□□□□ -1.5
CHD9-210ENST00000564582 TMCO5AQ8N6Q1 288 aa5.65□□□□□ -1.5
CHD9-210ENST00000564582 PCYOX1LQ8NBM8 494 aa5.65□□□□□ -1.5
CHD9-210ENST00000564582 REPS2Q8NFH8 660 aa5.65□□□□□ -1.5
CHD9-210ENST00000564582 ANGPTL6Q8NI99 470 aa5.65□□□□□ -1.5
CHD9-210ENST00000564582 GRPEL2Q8TAA5 225 aa5.65□□□□□ -1.5
CHD9-210ENST00000564582 IL17DQ8TAD2 202 aa5.65□□□□□ -1.5
CHD9-210ENST00000564582 TRAF3IP1Q8TDR0 691 aaPredicted RBP5.65□□□□□ -1.5
CHD9-210ENST00000564582 HOXB13Q92826 284 aaPredicted RBP5.65□□□□□ -1.5
CHD9-210ENST00000564582 TMA16Q96EY4 203 aaKnown RBP5.65□□□□□ -1.5
CHD9-210ENST00000564582 RMND5BQ96G75 393 aaPredicted RBP5.65□□□□□ -1.5
CHD9-210ENST00000564582 PLEKHA8Q96JA3 519 aa5.65□□□□□ -1.5
CHD9-210ENST00000564582 FAM20AQ96MK3 541 aa5.65□□□□□ -1.5
CHD9-210ENST00000564582 RILPQ96NA2 401 aa5.65□□□□□ -1.5
CHD9-210ENST00000564582 FAM193BQ96PV7 902 aaPredicted RBP5.65□□□□□ -1.5
CHD9-210ENST00000564582 ZNF347Q96SE7 839 aa5.65□□□□□ -1.5
CHD9-210ENST00000564582 DDX50Q9BQ39 737 aaKnown RBP5.65□□□□□ -1.5
CHD9-210ENST00000564582 OSBPL10Q9BXB5 764 aa5.65□□□□□ -1.5
CHD9-210ENST00000564582 PAIP1Q9H074 479 aaKnown RBP5.65□□□□□ -1.5
CHD9-210ENST00000564582 ZCWPW1Q9H0M4 648 aa5.65□□□□□ -1.5
CHD9-210ENST00000564582 GBA3Q9H227 469 aa5.65□□□□□ -1.5
CHD9-210ENST00000564582 TMEM206Q9H813 350 aa5.65□□□□□ -1.5
CHD9-210ENST00000564582 RMND5AQ9H871 391 aa5.65□□□□□ -1.5
CHD9-210ENST00000564582 VPS37BQ9H9H4 285 aa5.65□□□□□ -1.5
CHD9-210ENST00000564582 PARVGQ9HBI0 331 aa5.65□□□□□ -1.5
CHD9-210ENST00000564582 PCDH9Q9HC56 1237 aa5.65□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms