RNA–Protein interactions for RNA: ENST00000564228.5

TCF4-222, Transcript of transcription factor 4, humanhuman

TSL 1 (best) BASIC

Gene TCF4, Length 1,915 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-222ENST00000564228 MAGED4Q96JG8 741 aa11.09□□□□□ -0.63
TCF4-222ENST00000564228 RNF157Q96PX1 679 aa11.09□□□□□ -0.63
TCF4-222ENST00000564228 LPIN3Q9BQK8 851 aa11.09□□□□□ -0.63
TCF4-222ENST00000564228 NAT9Q9BTE0 207 aa11.09□□□□□ -0.63
TCF4-222ENST00000564228 MRPL9Q9BYD2 267 aaKnown RBP11.09□□□□□ -0.63
TCF4-222ENST00000564228 IL22Q9GZX6 179 aa11.09□□□□□ -0.63
TCF4-222ENST00000564228 FAM124BQ9H5Z6 455 aaPredicted RBP11.09□□□□□ -0.63
TCF4-222ENST00000564228 WDR55Q9H6Y2 383 aaPredicted RBP11.09□□□□□ -0.63
TCF4-222ENST00000564228 THG1LQ9NWX6 298 aaKnown RBP11.09□□□□□ -0.63
TCF4-222ENST00000564228 CD300AQ9UGN4 299 aa11.09□□□□□ -0.63
TCF4-222ENST00000564228 TRAF6Q9Y4K3 522 aa11.09□□□□□ -0.63
TCF4-222ENST00000564228 LAMA2P24043 3122 aaKnown RBP11.09□□□□□ -0.63
TCF4-222ENST00000564228 ZBBXA8MT70 800 aa11.09□□□□□ -0.63
TCF4-222ENST00000564228 TNFRSF10AO00220 468 aa11.09□□□□□ -0.63
TCF4-222ENST00000564228 MSI1O43347 362 aaKnown RBP11.09□□□□□ -0.63
TCF4-222ENST00000564228 GRID2O43424 1007 aa11.09□□□□□ -0.63
TCF4-222ENST00000564228 AMHP03971 560 aa11.09□□□□□ -0.63
TCF4-222ENST00000564228 PFKMP08237 780 aa11.09□□□□□ -0.63
TCF4-222ENST00000564228 GNAO1P09471 354 aa11.09□□□□□ -0.63
TCF4-222ENST00000564228 VDRP11473 427 aa11.09□□□□□ -0.63
TCF4-222ENST00000564228 ODC1P11926 461 aa11.09□□□□□ -0.63
TCF4-222ENST00000564228 TYK2P29597 1187 aa11.09□□□□□ -0.63
TCF4-222ENST00000564228 GP5P40197 560 aa11.09□□□□□ -0.63
TCF4-222ENST00000564228 ATXN3P54252 364 aaPredicted RBP11.09□□□□□ -0.63
TCF4-222ENST00000564228 STX5Q13190 355 aa11.09□□□□□ -0.63
TCF4-222ENST00000564228 SELENBP1Q13228 472 aa11.09□□□□□ -0.63
TCF4-222ENST00000564228 NME3Q13232 169 aa11.09□□□□□ -0.63
TCF4-222ENST00000564228 SEMA5AQ13591 1074 aa11.09□□□□□ -0.63
TCF4-222ENST00000564228 ATP6AP1Q15904 470 aa11.09□□□□□ -0.63
TCF4-222ENST00000564228 SAMD4BQ5PRF9 694 aaKnown RBP11.09□□□□□ -0.63
TCF4-222ENST00000564228 GRTP1Q5TC63 336 aa11.09□□□□□ -0.63
TCF4-222ENST00000564228 ZNF773Q6PK81 442 aa11.09□□□□□ -0.63
TCF4-222ENST00000564228 HACD2Q6Y1H2 254 aa11.09□□□□□ -0.63
TCF4-222ENST00000564228 SPRED1Q7Z699 444 aa11.09□□□□□ -0.63
TCF4-222ENST00000564228 UNC93AQ86WB7 457 aa11.09□□□□□ -0.63
TCF4-222ENST00000564228 OSTM1Q86WC4 334 aa11.09□□□□□ -0.63
TCF4-222ENST00000564228 PARP8Q8N3A8 854 aa11.09□□□□□ -0.63
TCF4-222ENST00000564228 ABHD11Q8NFV4 315 aa11.09□□□□□ -0.63
TCF4-222ENST00000564228 ZUFSPQ96AP4 578 aa11.09□□□□□ -0.63
TCF4-222ENST00000564228 SH3YL1Q96HL8 342 aaPredicted RBP11.09□□□□□ -0.63
TCF4-222ENST00000564228 LHX5Q9H2C1 402 aa11.09□□□□□ -0.63
TCF4-222ENST00000564228 MRPL46Q9H2W6 279 aaKnown RBP11.09□□□□□ -0.63
TCF4-222ENST00000564228 IL23AQ9NPF7 189 aa11.09□□□□□ -0.63
TCF4-222ENST00000564228 AKIP1Q9NQ31 210 aa11.09□□□□□ -0.63
TCF4-222ENST00000564228 MTMR10Q9NXD2 777 aa11.09□□□□□ -0.63
TCF4-222ENST00000564228 PKD2L2Q9NZM6 624 aa11.09□□□□□ -0.63
TCF4-222ENST00000564228 USP18Q9UMW8 372 aa11.09□□□□□ -0.63
TCF4-222ENST00000564228 SPO11Q9Y5K1 396 aa11.09□□□□□ -0.63
TCF4-222ENST00000564228 CEP290O15078 2479 aa11.09□□□□□ -0.63
TCF4-222ENST00000564228 KIAA1671Q9BY89 1806 aa11.08□□□□□ -0.64
TCF4-222ENST00000564228 CENPBD1B2RD01 187 aa11.08□□□□□ -0.64
TCF4-222ENST00000564228 M0QYV0 167 aa11.08□□□□□ -0.64
TCF4-222ENST00000564228 EIF3FO00303 357 aaPredicted RBP11.08□□□□□ -0.64
TCF4-222ENST00000564228 CLOCKO15516 846 aa11.08□□□□□ -0.64
TCF4-222ENST00000564228 NTRK1P04629 796 aa11.08□□□□□ -0.64
TCF4-222ENST00000564228 MBL2P11226 248 aaPredicted RBP11.08□□□□□ -0.64
TCF4-222ENST00000564228 CKMT2P17540 419 aa11.08□□□□□ -0.64
TCF4-222ENST00000564228 NAT1P18440 290 aa11.08□□□□□ -0.64
TCF4-222ENST00000564228 PGAM1P18669 254 aa11.08□□□□□ -0.64
TCF4-222ENST00000564228 TCN1P20061 433 aaPredicted RBP11.08□□□□□ -0.64
TCF4-222ENST00000564228 WARSP23381 471 aaKnown RBP11.08□□□□□ -0.64
TCF4-222ENST00000564228 MPSTP25325 297 aa11.08□□□□□ -0.64
TCF4-222ENST00000564228 RBL1P28749 1068 aa11.08□□□□□ -0.64
TCF4-222ENST00000564228 IDUAP35475 653 aa11.08□□□□□ -0.64
TCF4-222ENST00000564228 CAPGP40121 348 aa11.08□□□□□ -0.64
TCF4-222ENST00000564228 PBX3P40426 434 aa11.08□□□□□ -0.64
TCF4-222ENST00000564228 OPRL1P41146 370 aa11.08□□□□□ -0.64
TCF4-222ENST00000564228 BCAR1P56945 870 aa11.08□□□□□ -0.64
TCF4-222ENST00000564228 WDR5P61964 334 aaKnown RBP11.08□□□□□ -0.64
TCF4-222ENST00000564228 FPGSQ05932 587 aa11.08□□□□□ -0.64
TCF4-222ENST00000564228 SPCS2Q15005 226 aa11.08□□□□□ -0.64
TCF4-222ENST00000564228 STILQ15468 1287 aa11.08□□□□□ -0.64
TCF4-222ENST00000564228 CCNYL2Q5T2Q4 361 aa11.08□□□□□ -0.64
TCF4-222ENST00000564228 CD300LGQ6UXG3 332 aa11.08□□□□□ -0.64
TCF4-222ENST00000564228 LIMS2Q7Z4I7 341 aa11.08□□□□□ -0.64
TCF4-222ENST00000564228 CLEC14AQ86T13 490 aa11.08□□□□□ -0.64
TCF4-222ENST00000564228 PLD5Q8N7P1 536 aa11.08□□□□□ -0.64
TCF4-222ENST00000564228 FAM156AQ8NDB6 213 aa11.08□□□□□ -0.64
TCF4-222ENST00000564228 OR2T34Q8NGX1 318 aa11.08□□□□□ -0.64
TCF4-222ENST00000564228 OR2T3Q8NH03 318 aa11.08□□□□□ -0.64
TCF4-222ENST00000564228 LILRB4Q8NHJ6 448 aa11.08□□□□□ -0.64
TCF4-222ENST00000564228 PPWD1Q96BP3 646 aaKnown RBP11.08□□□□□ -0.64
TCF4-222ENST00000564228 VMP1Q96GC9 406 aa11.08□□□□□ -0.64
TCF4-222ENST00000564228 SLC45A3Q96JT2 553 aa11.08□□□□□ -0.64
TCF4-222ENST00000564228 NPAS2Q99743 824 aa11.08□□□□□ -0.64
TCF4-222ENST00000564228 CPNE1Q99829 537 aa11.08□□□□□ -0.64
TCF4-222ENST00000564228 GATA5Q9BWX5 397 aaPredicted RBP11.08□□□□□ -0.64
TCF4-222ENST00000564228 TRIM15Q9C019 465 aa11.08□□□□□ -0.64
TCF4-222ENST00000564228 SPAG4Q9NPE6 437 aa11.08□□□□□ -0.64
TCF4-222ENST00000564228 SNX15Q9NRS6 342 aa11.08□□□□□ -0.64
TCF4-222ENST00000564228 CCM2LQ9NUG4 571 aaPredicted RBP11.08□□□□□ -0.64
TCF4-222ENST00000564228 ASNSD1Q9NWL6 643 aa11.08□□□□□ -0.64
TCF4-222ENST00000564228 OXSMQ9NWU1 459 aa11.08□□□□□ -0.64
TCF4-222ENST00000564228 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP11.08□□□□□ -0.64
TCF4-222ENST00000564228 CARD8Q9Y2G2 431 aa11.08□□□□□ -0.64
TCF4-222ENST00000564228 RAD54BQ9Y620 910 aa11.08□□□□□ -0.64
TCF4-222ENST00000564228 COPG1Q9Y678 874 aaKnown RBP11.08□□□□□ -0.64
TCF4-222ENST00000564228 AQP12BA6NM10 295 aa11.07□□□□□ -0.64
TCF4-222ENST00000564228 ZNF487B1APH4 448 aa11.07□□□□□ -0.64
TCF4-222ENST00000564228 NT5C1B-RDH14C9J2C7 533 aa11.07□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms