RNA–Protein interactions for RNA: ENST00000563960.1

AC138869.3-201, humanhuman

TSL 1 (best) BASIC

Gene AC138869.3, Length 2,486 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC138869.3-201ENST00000563960 BSNDQ8WZ55 320 aa9.18□□□□□ -0.94
AC138869.3-201ENST00000563960 SGCDQ92629 289 aa9.18□□□□□ -0.94
AC138869.3-201ENST00000563960 TOP1MTQ969P6 601 aa9.18□□□□□ -0.94
AC138869.3-201ENST00000563960 ZFYVE19Q96K21 471 aa9.18□□□□□ -0.94
AC138869.3-201ENST00000563960 DEFB118Q96PH6 123 aa9.18□□□□□ -0.94
AC138869.3-201ENST00000563960 C11orf70Q9BRQ4 267 aa9.18□□□□□ -0.94
AC138869.3-201ENST00000563960 SEZ6LQ9BYH1 1024 aa9.18□□□□□ -0.94
AC138869.3-201ENST00000563960 C2orf40Q9H1Z8 148 aa9.18□□□□□ -0.94
AC138869.3-201ENST00000563960 PDZD7Q9H5P4 517 aa9.18□□□□□ -0.94
AC138869.3-201ENST00000563960 SLA2Q9H6Q3 261 aa9.18□□□□□ -0.94
AC138869.3-201ENST00000563960 SPC25Q9HBM1 224 aa9.18□□□□□ -0.94
AC138869.3-201ENST00000563960 DNMT3LQ9UJW3 386 aa9.18□□□□□ -0.94
AC138869.3-201ENST00000563960 Q9Y3F1 56 aa9.18□□□□□ -0.94
AC138869.3-201ENST00000563960 CDY2AQ9Y6F7 541 aa9.18□□□□□ -0.94
AC138869.3-201ENST00000563960 CDY1Q9Y6F8 540 aa9.18□□□□□ -0.94
AC138869.3-201ENST00000563960 RNF103-CHMP3A0A140T963 221 aa9.17□□□□□ -0.94
AC138869.3-201ENST00000563960 ISPDA4D126 451 aa9.17□□□□□ -0.94
AC138869.3-201ENST00000563960 E7ENX8 843 aa9.17□□□□□ -0.94
AC138869.3-201ENST00000563960 DAB1O75553 588 aa9.17□□□□□ -0.94
AC138869.3-201ENST00000563960 DGAT1O75907 488 aa9.17□□□□□ -0.94
AC138869.3-201ENST00000563960 HOXD8P13378 290 aaPredicted RBP9.17□□□□□ -0.94
AC138869.3-201ENST00000563960 ICAM2P13598 275 aa9.17□□□□□ -0.94
AC138869.3-201ENST00000563960 PSMD8P48556 350 aa9.17□□□□□ -0.94
AC138869.3-201ENST00000563960 CLCN3P51790 818 aa9.17□□□□□ -0.94
AC138869.3-201ENST00000563960 ZNF132P52740 706 aa9.17□□□□□ -0.94
AC138869.3-201ENST00000563960 PRMT2P55345 433 aa9.17□□□□□ -0.94
AC138869.3-201ENST00000563960 YWHAZP63104 245 aaKnown RBP9.17□□□□□ -0.94
AC138869.3-201ENST00000563960 GTF2BQ00403 316 aa9.17□□□□□ -0.94
AC138869.3-201ENST00000563960 NAB1Q13506 487 aa9.17□□□□□ -0.94
AC138869.3-201ENST00000563960 DPYSL3Q14195 570 aa9.17□□□□□ -0.94
AC138869.3-201ENST00000563960 MFSD10Q14728 455 aa9.17□□□□□ -0.94
AC138869.3-201ENST00000563960 POLD3Q15054 466 aaPredicted RBP9.17□□□□□ -0.94
AC138869.3-201ENST00000563960 BRMS1LQ5PSV4 323 aa9.17□□□□□ -0.94
AC138869.3-201ENST00000563960 MARCH8Q5T0T0 291 aa9.17□□□□□ -0.94
AC138869.3-201ENST00000563960 AGAP6Q5VW22 663 aa9.17□□□□□ -0.94
AC138869.3-201ENST00000563960 BROXQ5VW32 411 aa9.17□□□□□ -0.94
AC138869.3-201ENST00000563960 TMEM198Q66K66 360 aa9.17□□□□□ -0.94
AC138869.3-201ENST00000563960 TRMT10BQ6PF06 316 aaKnown RBP9.17□□□□□ -0.94
AC138869.3-201ENST00000563960 PIGZQ86VD9 579 aa9.17□□□□□ -0.94
AC138869.3-201ENST00000563960 METTL2AQ96IZ6 378 aaKnown RBP9.17□□□□□ -0.94
AC138869.3-201ENST00000563960 NT5C1BQ96P26 610 aa9.17□□□□□ -0.94
AC138869.3-201ENST00000563960 AGAP4Q96P64 663 aa9.17□□□□□ -0.94
AC138869.3-201ENST00000563960 ALOXE3Q9BYJ1 711 aa9.17□□□□□ -0.94
AC138869.3-201ENST00000563960 ZNF385DQ9H6B1 395 aa9.17□□□□□ -0.94
AC138869.3-201ENST00000563960 EPS8L2Q9H6S3 715 aa9.17□□□□□ -0.94
AC138869.3-201ENST00000563960 LRRC40Q9H9A6 602 aa9.17□□□□□ -0.94
AC138869.3-201ENST00000563960 PDLIM7Q9NR12 457 aa9.17□□□□□ -0.94
AC138869.3-201ENST00000563960 PAQR5Q9NXK6 330 aaPredicted RBP9.17□□□□□ -0.94
AC138869.3-201ENST00000563960 ZC3H7BQ9UGR2 993 aaKnown RBP9.17□□□□□ -0.94
AC138869.3-201ENST00000563960 PCDHB12Q9Y5F1 795 aa9.17□□□□□ -0.94
AC138869.3-201ENST00000563960 KIAA0100Q14667 2235 aaKnown RBP9.17□□□□□ -0.94
AC138869.3-201ENST00000563960 A0A1W2PQ72 361 aa9.17□□□□□ -0.94
AC138869.3-201ENST00000563960 OR5K3A6NET4 321 aa9.17□□□□□ -0.94
AC138869.3-201ENST00000563960 PRORSD1PA6NEY8 169 aa9.17□□□□□ -0.94
AC138869.3-201ENST00000563960 CENPXA8MT69 81 aa9.17□□□□□ -0.94
AC138869.3-201ENST00000563960 PALM2-AKAP2B1ALY0 433 aaPredicted RBP9.17□□□□□ -0.94
AC138869.3-201ENST00000563960 TRDMT1O14717 391 aaKnown RBP9.17□□□□□ -0.94
AC138869.3-201ENST00000563960 TRIM24O15164 1050 aa9.17□□□□□ -0.94
AC138869.3-201ENST00000563960 HBP1O60381 514 aa9.17□□□□□ -0.94
AC138869.3-201ENST00000563960 NDST3O95803 873 aa9.17□□□□□ -0.94
AC138869.3-201ENST00000563960 F2P00734 622 aa9.17□□□□□ -0.94
AC138869.3-201ENST00000563960 SMIM10L2AP0DMW4 78 aa9.17□□□□□ -0.94
AC138869.3-201ENST00000563960 SMIM10L2BP0DMW5 78 aa9.17□□□□□ -0.94
AC138869.3-201ENST00000563960 CCL5P13501 91 aa9.17□□□□□ -0.94
AC138869.3-201ENST00000563960 PTPN7P35236 360 aa9.17□□□□□ -0.94
AC138869.3-201ENST00000563960 CAPGP40121 348 aa9.17□□□□□ -0.94
AC138869.3-201ENST00000563960 HTR2BP41595 481 aa9.17□□□□□ -0.94
AC138869.3-201ENST00000563960 SLC9A3P48764 834 aa9.17□□□□□ -0.94
AC138869.3-201ENST00000563960 PSEN2P49810 448 aa9.17□□□□□ -0.94
AC138869.3-201ENST00000563960 AP2S1P53680 142 aaPredicted RBP9.17□□□□□ -0.94
AC138869.3-201ENST00000563960 DSTNP60981 165 aa9.17□□□□□ -0.94
AC138869.3-201ENST00000563960 PSME3P61289 254 aa9.17□□□□□ -0.94
AC138869.3-201ENST00000563960 RPL7AP62424 266 aaKnown RBP9.17□□□□□ -0.94
AC138869.3-201ENST00000563960 BNIP2Q12982 314 aa9.17□□□□□ -0.94
AC138869.3-201ENST00000563960 GRIK4Q16099 956 aa9.17□□□□□ -0.94
AC138869.3-201ENST00000563960 GEN1Q17RS7 908 aa9.17□□□□□ -0.94
AC138869.3-201ENST00000563960 ZFP69Q49AA0 526 aa9.17□□□□□ -0.94
AC138869.3-201ENST00000563960 STEAP3Q658P3 488 aa9.17□□□□□ -0.94
AC138869.3-201ENST00000563960 EFCAB12Q6NXP0 572 aa9.17□□□□□ -0.94
AC138869.3-201ENST00000563960 TIFABQ6ZNK6 161 aa9.17□□□□□ -0.94
AC138869.3-201ENST00000563960 USP51Q70EK9 711 aa9.17□□□□□ -0.94
AC138869.3-201ENST00000563960 CTU1Q7Z7A3 348 aaKnown RBP9.17□□□□□ -0.94
AC138869.3-201ENST00000563960 CCDC103Q8IW40 242 aa9.17□□□□□ -0.94
AC138869.3-201ENST00000563960 BRSK2Q8IWQ3 736 aa9.17□□□□□ -0.94
AC138869.3-201ENST00000563960 HS6ST3Q8IZP7 471 aa9.17□□□□□ -0.94
AC138869.3-201ENST00000563960 SFRP1Q8N474 314 aa9.17□□□□□ -0.94
AC138869.3-201ENST00000563960 TDRD5Q8NAT2 981 aaKnown RBP9.17□□□□□ -0.94
AC138869.3-201ENST00000563960 PSD4Q8NDX1 1056 aa9.17□□□□□ -0.94
AC138869.3-201ENST00000563960 PIK3C3Q8NEB9 887 aa9.17□□□□□ -0.94
AC138869.3-201ENST00000563960 IL17RDQ8NFM7 739 aa9.17□□□□□ -0.94
AC138869.3-201ENST00000563960 RHOXF1Q8NHV9 184 aa9.17□□□□□ -0.94
AC138869.3-201ENST00000563960 PIK3R3Q92569 461 aa9.17□□□□□ -0.94
AC138869.3-201ENST00000563960 PBXIP1Q96AQ6 731 aa9.17□□□□□ -0.94
AC138869.3-201ENST00000563960 SLC39A13Q96H72 371 aa9.17□□□□□ -0.94
AC138869.3-201ENST00000563960 XRN2Q9H0D6 950 aaKnown RBP eCLIP9.17□□□□□ -0.94
AC138869.3-201ENST00000563960 POLR3FQ9H1D9 316 aaPredicted RBP9.17□□□□□ -0.94
AC138869.3-201ENST00000563960 POPDC2Q9HBU9 364 aa9.17□□□□□ -0.94
AC138869.3-201ENST00000563960 IL37Q9NZH6 218 aa9.17□□□□□ -0.94
AC138869.3-201ENST00000563960 TMEM216Q9P0N5 145 aa9.17□□□□□ -0.94
AC138869.3-201ENST00000563960 CFL2Q9Y281 166 aa9.17□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms