RNA–Protein interactions for RNA: ENST00000563739.5

SF3B3-204, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 2

Gene SF3B3, Length 1,105 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-204ENST00000563739 J3KR12 359 aa10.37□□□□□ -0.75
SF3B3-204ENST00000563739 TRAFD1O14545 582 aaPredicted RBP10.37□□□□□ -0.75
SF3B3-204ENST00000563739 RASA4O43374 803 aa10.37□□□□□ -0.75
SF3B3-204ENST00000563739 BUB1O43683 1085 aa10.37□□□□□ -0.75
SF3B3-204ENST00000563739 ALDH4A1P30038 563 aa10.37□□□□□ -0.75
SF3B3-204ENST00000563739 ETFBP38117 255 aa10.37□□□□□ -0.75
SF3B3-204ENST00000563739 STAT5AP42229 794 aa10.37□□□□□ -0.75
SF3B3-204ENST00000563739 SUOXP51687 545 aa10.37□□□□□ -0.75
SF3B3-204ENST00000563739 GEMIN4P57678 1058 aaKnown RBP10.37□□□□□ -0.75
SF3B3-204ENST00000563739 PTPRRQ15256 657 aa10.37□□□□□ -0.75
SF3B3-204ENST00000563739 CDO1Q16878 200 aa10.37□□□□□ -0.75
SF3B3-204ENST00000563739 CRTC2Q53ET0 693 aaPredicted RBP10.37□□□□□ -0.75
SF3B3-204ENST00000563739 RWDD4Q6NW29 188 aaKnown RBP10.37□□□□□ -0.75
SF3B3-204ENST00000563739 DPPA4Q7L190 304 aa10.37□□□□□ -0.75
SF3B3-204ENST00000563739 AGBL5Q8NDL9 886 aa10.37□□□□□ -0.75
SF3B3-204ENST00000563739 HCAR2Q8TDS4 363 aa10.37□□□□□ -0.75
SF3B3-204ENST00000563739 C18orf8Q96DM3 657 aa10.37□□□□□ -0.75
SF3B3-204ENST00000563739 NAA15Q9BXJ9 866 aaKnown RBP10.37□□□□□ -0.75
SF3B3-204ENST00000563739 LRRC19Q9H756 370 aa10.37□□□□□ -0.75
SF3B3-204ENST00000563739 LRRC4CQ9HCJ2 640 aa10.37□□□□□ -0.75
SF3B3-204ENST00000563739 SLC39A1Q9NY26 324 aa10.37□□□□□ -0.75
SF3B3-204ENST00000563739 DNAJC12Q9UKB3 198 aa10.37□□□□□ -0.75
SF3B3-204ENST00000563739 FHOD1Q9Y613 1164 aa10.37□□□□□ -0.75
SF3B3-204ENST00000563739 ADGRG4Q8IZF6 3080 aa10.37□□□□□ -0.75
SF3B3-204ENST00000563739 GTPBP10A4D1E9 387 aaKnown RBP10.36□□□□□ -0.75
SF3B3-204ENST00000563739 CFAP69A5D8W1 941 aa10.36□□□□□ -0.75
SF3B3-204ENST00000563739 ZSCAN5CA6NGD5 496 aaPredicted RBP10.36□□□□□ -0.75
SF3B3-204ENST00000563739 ENO4A6NNW6 628 aa10.36□□□□□ -0.75
SF3B3-204ENST00000563739 WASH4PA8MWX3 477 aa10.36□□□□□ -0.75
SF3B3-204ENST00000563739 SMC2O95347 1197 aa10.36□□□□□ -0.75
SF3B3-204ENST00000563739 CLDN1O95832 211 aa10.36□□□□□ -0.75
SF3B3-204ENST00000563739 PLEKP08567 350 aaPredicted RBP10.36□□□□□ -0.75
SF3B3-204ENST00000563739 MYCLP1P12525 358 aaPredicted RBP10.36□□□□□ -0.75
SF3B3-204ENST00000563739 CYP11B1P15538 503 aa10.36□□□□□ -0.75
SF3B3-204ENST00000563739 ZNF28P17035 718 aa10.36□□□□□ -0.75
SF3B3-204ENST00000563739 TNFAIP3P21580 790 aa10.36□□□□□ -0.75
SF3B3-204ENST00000563739 LHCGRP22888 699 aa10.36□□□□□ -0.75
SF3B3-204ENST00000563739 STAT1P42224 750 aa10.36□□□□□ -0.75
SF3B3-204ENST00000563739 GPR3P46089 330 aa10.36□□□□□ -0.75
SF3B3-204ENST00000563739 POLD2P49005 469 aa10.36□□□□□ -0.75
SF3B3-204ENST00000563739 CTBSQ01459 385 aa10.36□□□□□ -0.75
SF3B3-204ENST00000563739 MC2RQ01718 297 aa10.36□□□□□ -0.75
SF3B3-204ENST00000563739 PTK2Q05397 1052 aa10.36□□□□□ -0.75
SF3B3-204ENST00000563739 CNGA3Q16281 694 aa10.36□□□□□ -0.75
SF3B3-204ENST00000563739 PRR30Q53SZ7 412 aaPredicted RBP10.36□□□□□ -0.75
SF3B3-204ENST00000563739 CHCHD2P9Q5T1J5 151 aaPredicted RBP10.36□□□□□ -0.75
SF3B3-204ENST00000563739 TMEM164Q5U3C3 297 aa10.36□□□□□ -0.75
SF3B3-204ENST00000563739 TAF3Q5VWG9 929 aa10.36□□□□□ -0.75
SF3B3-204ENST00000563739 PNCKQ6P2M8 343 aa10.36□□□□□ -0.75
SF3B3-204ENST00000563739 PHLDB2Q86SQ0 1253 aa10.36□□□□□ -0.75
SF3B3-204ENST00000563739 HEATR4Q86WZ0 1026 aa10.36□□□□□ -0.75
SF3B3-204ENST00000563739 NLGN4XQ8N0W4 816 aa10.36□□□□□ -0.75
SF3B3-204ENST00000563739 TMEM35BQ8NCS4 154 aa10.36□□□□□ -0.75
SF3B3-204ENST00000563739 NLGN4YQ8NFZ3 816 aaPredicted RBP10.36□□□□□ -0.75
SF3B3-204ENST00000563739 KIAA1524Q8TCG1 905 aa10.36□□□□□ -0.75
SF3B3-204ENST00000563739 EPS8L1Q8TE68 723 aa10.36□□□□□ -0.75
SF3B3-204ENST00000563739 SLC20A1Q8WUM9 679 aa10.36□□□□□ -0.75
SF3B3-204ENST00000563739 APOBEC4Q8WW27 367 aaKnown RBP10.36□□□□□ -0.75
SF3B3-204ENST00000563739 RXFP2Q8WXD0 754 aa10.36□□□□□ -0.75
SF3B3-204ENST00000563739 CASKIN2Q8WXE0 1202 aa10.36□□□□□ -0.75
SF3B3-204ENST00000563739 NTAN1Q96AB6 310 aa10.36□□□□□ -0.75
SF3B3-204ENST00000563739 SCARF2Q96GP6 870 aaPredicted RBP10.36□□□□□ -0.75
SF3B3-204ENST00000563739 TIGD1Q96MW7 591 aa10.36□□□□□ -0.75
SF3B3-204ENST00000563739 TEX101Q9BY14 249 aa10.36□□□□□ -0.75
SF3B3-204ENST00000563739 RETREG1Q9H6L5 497 aa10.36□□□□□ -0.75
SF3B3-204ENST00000563739 SYNCQ9H7C4 482 aa10.36□□□□□ -0.75
SF3B3-204ENST00000563739 WDR26Q9H7D7 661 aa10.36□□□□□ -0.75
SF3B3-204ENST00000563739 SUDS3Q9H7L9 328 aaPredicted RBP10.36□□□□□ -0.75
SF3B3-204ENST00000563739 GPN2Q9H9Y4 310 aaPredicted RBP10.36□□□□□ -0.75
SF3B3-204ENST00000563739 CARS2Q9HA77 564 aaKnown RBP10.36□□□□□ -0.75
SF3B3-204ENST00000563739 CHMP5Q9NZZ3 219 aa10.36□□□□□ -0.75
SF3B3-204ENST00000563739 B4GALT6Q9UBX8 382 aa10.36□□□□□ -0.75
SF3B3-204ENST00000563739 NOCTQ9UK39 431 aaKnown RBP10.36□□□□□ -0.75
SF3B3-204ENST00000563739 SUFUQ9UMX1 484 aa10.36□□□□□ -0.75
SF3B3-204ENST00000563739 CROCCQ5TZA2 2017 aa10.36□□□□□ -0.75
SF3B3-204ENST00000563739 A0A0U1RQS6 177 aa10.35□□□□□ -0.75
SF3B3-204ENST00000563739 TCRBV5S1A1TA0A578 114 aa10.35□□□□□ -0.75
SF3B3-204ENST00000563739 A1L4Q6 167 aa10.35□□□□□ -0.75
SF3B3-204ENST00000563739 CACNB4O00305 520 aaPredicted RBP10.35□□□□□ -0.75
SF3B3-204ENST00000563739 BIN1O00499 593 aa10.35□□□□□ -0.75
SF3B3-204ENST00000563739 STK17BO94768 372 aa10.35□□□□□ -0.75
SF3B3-204ENST00000563739 SORBS2O94875 1100 aaKnown RBP10.35□□□□□ -0.75
SF3B3-204ENST00000563739 GNA14O95837 355 aa10.35□□□□□ -0.75
SF3B3-204ENST00000563739 MMEP08473 750 aa10.35□□□□□ -0.75
SF3B3-204ENST00000563739 CHRNB2P17787 502 aa10.35□□□□□ -0.75
SF3B3-204ENST00000563739 KRT9P35527 623 aa10.35□□□□□ -0.75
SF3B3-204ENST00000563739 DCTP40126 519 aa10.35□□□□□ -0.75
SF3B3-204ENST00000563739 ADCY8P40145 1251 aa10.35□□□□□ -0.75
SF3B3-204ENST00000563739 PTPN9P43378 593 aa10.35□□□□□ -0.75
SF3B3-204ENST00000563739 ABHD18Q0P651 414 aa10.35□□□□□ -0.75
SF3B3-204ENST00000563739 PAK1Q13153 545 aa10.35□□□□□ -0.75
SF3B3-204ENST00000563739 EXOC3L4Q17RC7 722 aa10.35□□□□□ -0.75
SF3B3-204ENST00000563739 MIIPQ5JXC2 388 aa10.35□□□□□ -0.75
SF3B3-204ENST00000563739 NAA35Q5VZE5 725 aa10.35□□□□□ -0.75
SF3B3-204ENST00000563739 SMYD5Q6GMV2 418 aa10.35□□□□□ -0.75
SF3B3-204ENST00000563739 TCTN3Q6NUS6 607 aa10.35□□□□□ -0.75
SF3B3-204ENST00000563739 TMEM71Q6P5X7 295 aa10.35□□□□□ -0.75
SF3B3-204ENST00000563739 BRAT1Q6PJG6 821 aa10.35□□□□□ -0.75
SF3B3-204ENST00000563739 SLC30A9Q6PML9 568 aa10.35□□□□□ -0.75
SF3B3-204ENST00000563739 GBP6Q6ZN66 633 aa10.35□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms