RNA–Protein interactions for RNA: ENST00000563366.5

UBFD1-202, Transcript of ubiquitin family domain containing 1, humanhuman

TSL 3

Gene UBFD1, Length 709 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBFD1-202ENST00000563366 GLRA3O75311 464 aa9.73□□□□□ -0.85
UBFD1-202ENST00000563366 RPP40O75818 363 aaKnown RBP9.73□□□□□ -0.85
UBFD1-202ENST00000563366 CYP17A1P05093 508 aa9.73□□□□□ -0.85
UBFD1-202ENST00000563366 MPOP05164 745 aa9.73□□□□□ -0.85
UBFD1-202ENST00000563366 SRPRAP08240 638 aaKnown RBP9.73□□□□□ -0.85
UBFD1-202ENST00000563366 GSTA1P08263 222 aa9.73□□□□□ -0.85
UBFD1-202ENST00000563366 SRCP12931 536 aa9.73□□□□□ -0.85
UBFD1-202ENST00000563366 LPOP22079 712 aaPredicted RBP9.73□□□□□ -0.85
UBFD1-202ENST00000563366 ST8SIA6P61647 398 aa9.73□□□□□ -0.85
UBFD1-202ENST00000563366 CNGA3Q16281 694 aa9.73□□□□□ -0.85
UBFD1-202ENST00000563366 DBN1Q16643 649 aa9.73□□□□□ -0.85
UBFD1-202ENST00000563366 TCEAL5Q5H9L2 206 aa9.73□□□□□ -0.85
UBFD1-202ENST00000563366 FAM78AQ5JUQ0 283 aa9.73□□□□□ -0.85
UBFD1-202ENST00000563366 MROH9Q5TGP6 573 aa9.73□□□□□ -0.85
UBFD1-202ENST00000563366 HHATQ5VTY9 493 aa9.73□□□□□ -0.85
UBFD1-202ENST00000563366 MRNIPQ6NTE8 343 aa9.73□□□□□ -0.85
UBFD1-202ENST00000563366 NEPROQ6NW34 567 aa9.73□□□□□ -0.85
UBFD1-202ENST00000563366 ESRP1Q6NXG1 681 aaKnown RBP9.73□□□□□ -0.85
UBFD1-202ENST00000563366 CES3Q6UWW8 571 aa9.73□□□□□ -0.85
UBFD1-202ENST00000563366 LRRC69Q6ZNQ3 347 aa9.73□□□□□ -0.85
UBFD1-202ENST00000563366 TAX1BP1Q86VP1 789 aa9.73□□□□□ -0.85
UBFD1-202ENST00000563366 CPA6Q8N4T0 437 aa9.73□□□□□ -0.85
UBFD1-202ENST00000563366 ANKRD42Q8N9B4 389 aa9.73□□□□□ -0.85
UBFD1-202ENST00000563366 KDM1BQ8NB78 822 aa9.73□□□□□ -0.85
UBFD1-202ENST00000563366 LPCAT1Q8NF37 534 aa9.73□□□□□ -0.85
UBFD1-202ENST00000563366 RIN3Q8TB24 985 aa9.73□□□□□ -0.85
UBFD1-202ENST00000563366 ATXN2LQ8WWM7 1075 aaKnown RBP9.73□□□□□ -0.85
UBFD1-202ENST00000563366 ISL2Q96A47 359 aa9.73□□□□□ -0.85
UBFD1-202ENST00000563366 MAGEB18Q96M61 343 aa9.73□□□□□ -0.85
UBFD1-202ENST00000563366 ZNF641Q96N77 438 aaPredicted RBP9.73□□□□□ -0.85
UBFD1-202ENST00000563366 TSNARE1Q96NA8 513 aa9.73□□□□□ -0.85
UBFD1-202ENST00000563366 CPEB1Q9BZB8 566 aaKnown RBP9.73□□□□□ -0.85
UBFD1-202ENST00000563366 MFSD1Q9H3U5 465 aa9.73□□□□□ -0.85
UBFD1-202ENST00000563366 MAGEE1Q9HCI5 957 aa9.73□□□□□ -0.85
UBFD1-202ENST00000563366 IARS2Q9NSE4 1012 aaKnown RBP9.73□□□□□ -0.85
UBFD1-202ENST00000563366 DCDC2Q9UHG0 476 aa9.73□□□□□ -0.85
UBFD1-202ENST00000563366 FBXO10Q9UK96 956 aa9.73□□□□□ -0.85
UBFD1-202ENST00000563366 INTS6Q9UL03 887 aaKnown RBP9.73□□□□□ -0.85
UBFD1-202ENST00000563366 GRID1Q9ULK0 1009 aa9.73□□□□□ -0.85
UBFD1-202ENST00000563366 CHKBQ9Y259 395 aa9.73□□□□□ -0.85
UBFD1-202ENST00000563366 ANKRD33BA6NCL7 494 aa9.72□□□□□ -0.85
UBFD1-202ENST00000563366 HEPACAM2A8MVW5 462 aa9.72□□□□□ -0.85
UBFD1-202ENST00000563366 NDUFAB1O14561 156 aa9.72□□□□□ -0.85
UBFD1-202ENST00000563366 SPAG7O75391 227 aa9.72□□□□□ -0.85
UBFD1-202ENST00000563366 RFPL1O75677 317 aa9.72□□□□□ -0.85
UBFD1-202ENST00000563366 PIAS1O75925 651 aa9.72□□□□□ -0.85
UBFD1-202ENST00000563366 PGLSO95336 258 aa9.72□□□□□ -0.85
UBFD1-202ENST00000563366 POP4O95707 220 aaKnown RBP9.72□□□□□ -0.85
UBFD1-202ENST00000563366 FAM107AO95990 144 aa9.72□□□□□ -0.85
UBFD1-202ENST00000563366 OGNP20774 298 aaKnown RBP9.72□□□□□ -0.85
UBFD1-202ENST00000563366 PSMA3P25788 255 aa9.72□□□□□ -0.85
UBFD1-202ENST00000563366 TYK2P29597 1187 aa9.72□□□□□ -0.85
UBFD1-202ENST00000563366 EIF2DP41214 584 aaKnown RBP9.72□□□□□ -0.85
UBFD1-202ENST00000563366 ARCN1P48444 511 aaKnown RBP9.72□□□□□ -0.85
UBFD1-202ENST00000563366 CD151P48509 253 aa9.72□□□□□ -0.85
UBFD1-202ENST00000563366 CLCN5P51795 746 aa9.72□□□□□ -0.85
UBFD1-202ENST00000563366 KPNA2P52292 529 aaKnown RBP9.72□□□□□ -0.85
UBFD1-202ENST00000563366 POLR2LP62875 67 aaKnown RBP9.72□□□□□ -0.85
UBFD1-202ENST00000563366 FCHO2Q0JRZ9 810 aa9.72□□□□□ -0.85
UBFD1-202ENST00000563366 TRAF2Q12933 501 aa9.72□□□□□ -0.85
UBFD1-202ENST00000563366 MSLNQ13421 630 aaPredicted RBP9.72□□□□□ -0.85
UBFD1-202ENST00000563366 ADAM15Q13444 863 aa9.72□□□□□ -0.85
UBFD1-202ENST00000563366 INSCQ1MX18 579 aa9.72□□□□□ -0.85
UBFD1-202ENST00000563366 ACCSLQ4AC99 568 aa9.72□□□□□ -0.85
UBFD1-202ENST00000563366 TAF1BQ53T94 588 aaPredicted RBP9.72□□□□□ -0.85
UBFD1-202ENST00000563366 AARS2Q5JTZ9 985 aaKnown RBP9.72□□□□□ -0.85
UBFD1-202ENST00000563366 RNF187Q5TA31 235 aaPredicted RBP9.72□□□□□ -0.85
UBFD1-202ENST00000563366 MBLAC2Q68D91 279 aa9.72□□□□□ -0.85
UBFD1-202ENST00000563366 ZNF470Q6ECI4 717 aa9.72□□□□□ -0.85
UBFD1-202ENST00000563366 AFTPHQ6ULP2 937 aa9.72□□□□□ -0.85
UBFD1-202ENST00000563366 KYAT3Q6YP21 454 aaKnown RBP9.72□□□□□ -0.85
UBFD1-202ENST00000563366 MTSS1LQ765P7 747 aa9.72□□□□□ -0.85
UBFD1-202ENST00000563366 SDCCAG8Q86SQ7 713 aaPredicted RBP9.72□□□□□ -0.85
UBFD1-202ENST00000563366 TRIM42Q8IWZ5 723 aa9.72□□□□□ -0.85
UBFD1-202ENST00000563366 YAF2Q8IY57 180 aa9.72□□□□□ -0.85
UBFD1-202ENST00000563366 UNC5BQ8IZJ1 945 aa9.72□□□□□ -0.85
UBFD1-202ENST00000563366 C2CD4AQ8NCU7 369 aaPredicted RBP9.72□□□□□ -0.85
UBFD1-202ENST00000563366 OR13J1Q8NGT2 312 aa9.72□□□□□ -0.85
UBFD1-202ENST00000563366 OR6P1Q8NGX9 317 aa9.72□□□□□ -0.85
UBFD1-202ENST00000563366 MDM1Q8TC05 714 aa9.72□□□□□ -0.85
UBFD1-202ENST00000563366 BCAS4Q8TDM0 211 aa9.72□□□□□ -0.85
UBFD1-202ENST00000563366 PDCD6IPQ8WUM4 868 aaKnown RBP9.72□□□□□ -0.85
UBFD1-202ENST00000563366 TSPAN17Q96FV3 270 aa9.72□□□□□ -0.85
UBFD1-202ENST00000563366 CHMP6Q96FZ7 201 aa9.72□□□□□ -0.85
UBFD1-202ENST00000563366 LRIG1Q96JA1 1093 aa9.72□□□□□ -0.85
UBFD1-202ENST00000563366 VPS39Q96JC1 886 aa9.72□□□□□ -0.85
UBFD1-202ENST00000563366 ZNF778Q96MU6 729 aa9.72□□□□□ -0.85
UBFD1-202ENST00000563366 NECTIN4Q96NY8 510 aa9.72□□□□□ -0.85
UBFD1-202ENST00000563366 TCF12Q99081 682 aa9.72□□□□□ -0.85
UBFD1-202ENST00000563366 GPR22Q99680 433 aa9.72□□□□□ -0.85
UBFD1-202ENST00000563366 OSBPL1AQ9BXW6 950 aa9.72□□□□□ -0.85
UBFD1-202ENST00000563366 RBCK1Q9BYM8 510 aa9.72□□□□□ -0.85
UBFD1-202ENST00000563366 TM6SF2Q9BZW4 377 aa9.72□□□□□ -0.85
UBFD1-202ENST00000563366 VPS11Q9H270 941 aa9.72□□□□□ -0.85
UBFD1-202ENST00000563366 LINC00597Q9H2U6 94 aa9.72□□□□□ -0.85
UBFD1-202ENST00000563366 ZNF576Q9H609 170 aa9.72□□□□□ -0.85
UBFD1-202ENST00000563366 NLE1Q9NVX2 485 aaPredicted RBP9.72□□□□□ -0.85
UBFD1-202ENST00000563366 DEC1Q9P2X7 70 aa9.72□□□□□ -0.85
UBFD1-202ENST00000563366 MID2Q9UJV3 735 aa9.72□□□□□ -0.85
UBFD1-202ENST00000563366 ANKRD6Q9Y2G4 727 aa9.72□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms