RNA–Protein interactions for RNA: ENST00000563297.5

CLK3-211, Transcript of CDC like kinase 3, humanhuman

TSL 4

Gene CLK3, Length 526 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-211ENST00000563297 FUCA1P04066 466 aa15.76■□□□□ 0.11
CLK3-211ENST00000563297 RARAP10276 462 aa15.76■□□□□ 0.11
CLK3-211ENST00000563297 SLC5A2P31639 672 aa15.76■□□□□ 0.11
CLK3-211ENST00000563297 CCKBRP32239 447 aa15.76■□□□□ 0.11
CLK3-211ENST00000563297 HSPA9P38646 679 aaKnown RBP15.76■□□□□ 0.11
CLK3-211ENST00000563297 ZFP36L1Q07352 338 aaKnown RBP15.76■□□□□ 0.11
CLK3-211ENST00000563297 HLTFQ14527 1009 aaKnown RBP eCLIP15.76■□□□□ 0.11
CLK3-211ENST00000563297 ZNF235Q14590 738 aa15.76■□□□□ 0.11
CLK3-211ENST00000563297 CNGA3Q16281 694 aa15.76■□□□□ 0.11
CLK3-211ENST00000563297 C14orf28Q4W4Y0 310 aa15.76■□□□□ 0.11
CLK3-211ENST00000563297 TXNRD3NBQ6F5E7 133 aa15.76■□□□□ 0.11
CLK3-211ENST00000563297 TMCO3Q6UWJ1 677 aa15.76■□□□□ 0.11
CLK3-211ENST00000563297 ZNF605Q86T29 641 aa15.76■□□□□ 0.11
CLK3-211ENST00000563297 PDCD6IPQ8WUM4 868 aaKnown RBP15.76■□□□□ 0.11
CLK3-211ENST00000563297 HSPH1Q92598 858 aa15.76■□□□□ 0.11
CLK3-211ENST00000563297 CSPG4P5Q96PW8 444 aa15.76■□□□□ 0.11
CLK3-211ENST00000563297 STRADBQ9C0K7 418 aa15.76■□□□□ 0.11
CLK3-211ENST00000563297 MOSPD1Q9UJG1 213 aa15.76■□□□□ 0.11
CLK3-211ENST00000563297 ATXN7L1Q9ULK2 861 aaPredicted RBP15.76■□□□□ 0.11
CLK3-211ENST00000563297 PHTF1Q9UMS5 762 aa15.76■□□□□ 0.11
CLK3-211ENST00000563297 PCDHGA7Q9Y5G6 932 aa15.76■□□□□ 0.11
CLK3-211ENST00000563297 RNF215Q9Y6U7 377 aa15.76■□□□□ 0.11
CLK3-211ENST00000563297 HEXIM1O94992 359 aaKnown RBP15.75■□□□□ 0.11
CLK3-211ENST00000563297 ZIC2O95409 532 aaPredicted RBP15.75■□□□□ 0.11
CLK3-211ENST00000563297 HGFP14210 728 aa15.75■□□□□ 0.11
CLK3-211ENST00000563297 VIPR1P32241 457 aa15.75■□□□□ 0.11
CLK3-211ENST00000563297 ZNF165P49910 485 aa15.75■□□□□ 0.11
CLK3-211ENST00000563297 TRAF2Q12933 501 aa15.75■□□□□ 0.11
CLK3-211ENST00000563297 PIGHQ14442 188 aaPredicted RBP15.75■□□□□ 0.11
CLK3-211ENST00000563297 IQCB1Q15051 598 aa15.75■□□□□ 0.11
CLK3-211ENST00000563297 PTPRRQ15256 657 aa15.75■□□□□ 0.11
CLK3-211ENST00000563297 TSR1Q2NL82 804 aaKnown RBP15.75■□□□□ 0.11
CLK3-211ENST00000563297 ZSCAN23Q3MJ62 389 aa15.75■□□□□ 0.11
CLK3-211ENST00000563297 SPECC1LQ69YQ0 1117 aa15.75■□□□□ 0.11
CLK3-211ENST00000563297 CCDC81Q6ZN84 652 aa15.75■□□□□ 0.11
CLK3-211ENST00000563297 HSD11B1LQ7Z5J1 315 aa15.75■□□□□ 0.11
CLK3-211ENST00000563297 SPRED1Q7Z699 444 aa15.75■□□□□ 0.11
CLK3-211ENST00000563297 NRROSQ86YC3 692 aa15.75■□□□□ 0.11
CLK3-211ENST00000563297 GPBAR1Q8TDU6 330 aa15.75■□□□□ 0.11
CLK3-211ENST00000563297 NUS1Q96E22 293 aa15.75■□□□□ 0.11
CLK3-211ENST00000563297 SCRN2Q96FV2 425 aa15.75■□□□□ 0.11
CLK3-211ENST00000563297 MGME1Q9BQP7 344 aa15.75■□□□□ 0.11
CLK3-211ENST00000563297 TEX101Q9BY14 249 aa15.75■□□□□ 0.11
CLK3-211ENST00000563297 SEMA4CQ9C0C4 833 aa15.75■□□□□ 0.11
CLK3-211ENST00000563297 PCDH18Q9HCL0 1135 aa15.75■□□□□ 0.11
CLK3-211ENST00000563297 STAU2Q9NUL3 570 aaKnown RBP eCLIP15.75■□□□□ 0.11
CLK3-211ENST00000563297 SPATS2LQ9NUQ6 558 aaKnown RBP15.75■□□□□ 0.11
CLK3-211ENST00000563297 KCTD5Q9NXV2 234 aa15.75■□□□□ 0.11
CLK3-211ENST00000563297 EIF2AK3Q9NZJ5 1116 aaKnown RBP15.75■□□□□ 0.11
CLK3-211ENST00000563297 PIEZO2Q9H5I5 2752 aa15.75■□□□□ 0.11
CLK3-211ENST00000563297 CAPN8A6NHC0 703 aa15.74■□□□□ 0.11
CLK3-211ENST00000563297 B4DGG1 531 aa15.74■□□□□ 0.11
CLK3-211ENST00000563297 NVLO15381 856 aaKnown RBP15.74■□□□□ 0.11
CLK3-211ENST00000563297 B4GAT1O43505 415 aa15.74■□□□□ 0.11
CLK3-211ENST00000563297 NUDT21O43809 227 aaKnown RBP15.74■□□□□ 0.11
CLK3-211ENST00000563297 CPP00450 1065 aa15.74■□□□□ 0.11
CLK3-211ENST00000563297 CEACAM5P06731 702 aa15.74■□□□□ 0.11
CLK3-211ENST00000563297 MYCLP1P12525 358 aaPredicted RBP15.74■□□□□ 0.11
CLK3-211ENST00000563297 PLA2G2AP14555 144 aa15.74■□□□□ 0.11
CLK3-211ENST00000563297 CCNB1P14635 433 aa15.74■□□□□ 0.11
CLK3-211ENST00000563297 LHCGRP22888 699 aa15.74■□□□□ 0.11
CLK3-211ENST00000563297 ETV3P41162 512 aa15.74■□□□□ 0.11
CLK3-211ENST00000563297 MAXP61244 160 aa15.74■□□□□ 0.11
CLK3-211ENST00000563297 B4GALNT1Q00973 533 aa15.74■□□□□ 0.11
CLK3-211ENST00000563297 ARHGEF7Q14155 803 aa15.74■□□□□ 0.11
CLK3-211ENST00000563297 LY6DQ14210 128 aa15.74■□□□□ 0.11
CLK3-211ENST00000563297 FIGNQ5HY92 759 aa15.74■□□□□ 0.11
CLK3-211ENST00000563297 MARC1Q5VT66 337 aa15.74■□□□□ 0.11
CLK3-211ENST00000563297 KIAA1614Q5VZ46 1190 aa15.74■□□□□ 0.11
CLK3-211ENST00000563297 HGSNATQ68CP4 663 aa15.74■□□□□ 0.11
CLK3-211ENST00000563297 DENND2CQ68D51 928 aa15.74■□□□□ 0.11
CLK3-211ENST00000563297 TMPRSS9Q7Z410 1059 aa15.74■□□□□ 0.11
CLK3-211ENST00000563297 HEATR4Q86WZ0 1026 aa15.74■□□□□ 0.11
CLK3-211ENST00000563297 C17orf82Q86X59 251 aaPredicted RBP15.74■□□□□ 0.11
CLK3-211ENST00000563297 JAMLQ86YT9 394 aa15.74■□□□□ 0.11
CLK3-211ENST00000563297 BBS5Q8N3I7 341 aa15.74■□□□□ 0.11
CLK3-211ENST00000563297 TEKT4Q8WW24 435 aa15.74■□□□□ 0.11
CLK3-211ENST00000563297 DTD2Q96FN9 168 aa15.74■□□□□ 0.11
CLK3-211ENST00000563297 BTBD6Q96KE9 485 aa15.74■□□□□ 0.11
CLK3-211ENST00000563297 CCNL2Q96S94 520 aaPredicted RBP15.74■□□□□ 0.11
CLK3-211ENST00000563297 CARS2Q9HA77 564 aaKnown RBP15.74■□□□□ 0.11
CLK3-211ENST00000563297 PHPT1Q9NRX4 125 aaPredicted RBP15.74■□□□□ 0.11
CLK3-211ENST00000563297 ACSL6Q9UKU0 697 aa15.74■□□□□ 0.11
CLK3-211ENST00000563297 PPIL1Q9Y3C6 166 aa15.74■□□□□ 0.11
CLK3-211ENST00000563297 NPIPB15A6NHN6 443 aaPredicted RBP15.73■□□□□ 0.11
CLK3-211ENST00000563297 PGLSO95336 258 aa15.73■□□□□ 0.11
CLK3-211ENST00000563297 SERPINC1P01008 464 aa15.73■□□□□ 0.11
CLK3-211ENST00000563297 FGF1P05230 155 aa15.73■□□□□ 0.11
CLK3-211ENST00000563297 JMJD7P0C870 316 aa15.73■□□□□ 0.11
CLK3-211ENST00000563297 CYP2A6P11509 494 aaPredicted RBP15.73■□□□□ 0.11
CLK3-211ENST00000563297 IL4RP24394 825 aa15.73■□□□□ 0.11
CLK3-211ENST00000563297 MMP13P45452 471 aa15.73■□□□□ 0.11
CLK3-211ENST00000563297 CDH6P55285 790 aa15.73■□□□□ 0.11
CLK3-211ENST00000563297 TGIF1Q15583 401 aa15.73■□□□□ 0.11
CLK3-211ENST00000563297 RALGPS1Q5JS13 557 aa15.73■□□□□ 0.11
CLK3-211ENST00000563297 Q6ZVL8 140 aa15.73■□□□□ 0.11
CLK3-211ENST00000563297 TSPAN33Q86UF1 283 aa15.73■□□□□ 0.11
CLK3-211ENST00000563297 NIPA2Q8N8Q9 360 aa15.73■□□□□ 0.11
CLK3-211ENST00000563297 PTCD2Q8WV60 388 aaKnown RBP15.73■□□□□ 0.11
CLK3-211ENST00000563297 PIH1D2Q8WWB5 315 aa15.73■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 76.6 ms