RNA–Protein interactions for RNA: ENST00000562914.1

HERPUD1-205, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 2

Gene HERPUD1, Length 570 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-205ENST00000562914 LGR4Q9BXB1 951 aa15.77■□□□□ 0.12
HERPUD1-205ENST00000562914 TEX101Q9BY14 249 aa15.77■□□□□ 0.12
HERPUD1-205ENST00000562914 CARS2Q9HA77 564 aaKnown RBP15.77■□□□□ 0.12
HERPUD1-205ENST00000562914 SAMSN1Q9NSI8 373 aaKnown RBP15.77■□□□□ 0.12
HERPUD1-205ENST00000562914 TCRBV5S1A1TA0A578 114 aa15.76■□□□□ 0.11
HERPUD1-205ENST00000562914 TRAFD1O14545 582 aaPredicted RBP15.76■□□□□ 0.11
HERPUD1-205ENST00000562914 FGF1P05230 155 aa15.76■□□□□ 0.11
HERPUD1-205ENST00000562914 CCL4P13236 92 aa15.76■□□□□ 0.11
HERPUD1-205ENST00000562914 TEAD1P28347 426 aa15.76■□□□□ 0.11
HERPUD1-205ENST00000562914 CD1CP29017 333 aa15.76■□□□□ 0.11
HERPUD1-205ENST00000562914 CSTF2P33240 577 aaKnown RBP eCLIP15.76■□□□□ 0.11
HERPUD1-205ENST00000562914 PAPOLAP51003 745 aaKnown RBP15.76■□□□□ 0.11
HERPUD1-205ENST00000562914 OR1D5P58170 312 aa15.76■□□□□ 0.11
HERPUD1-205ENST00000562914 RAB15P59190 212 aa15.76■□□□□ 0.11
HERPUD1-205ENST00000562914 IL10RBQ08334 325 aa15.76■□□□□ 0.11
HERPUD1-205ENST00000562914 CLCA4Q14CN2 919 aa15.76■□□□□ 0.11
HERPUD1-205ENST00000562914 AMZ1Q400G9 498 aa15.76■□□□□ 0.11
HERPUD1-205ENST00000562914 DCUN1D2Q6PH85 259 aa15.76■□□□□ 0.11
HERPUD1-205ENST00000562914 CCL4L1Q8NHW4 92 aa15.76■□□□□ 0.11
HERPUD1-205ENST00000562914 NUS1Q96E22 293 aa15.76■□□□□ 0.11
HERPUD1-205ENST00000562914 COQ10AQ96MF6 247 aa15.76■□□□□ 0.11
HERPUD1-205ENST00000562914 MCEEQ96PE7 176 aa15.76■□□□□ 0.11
HERPUD1-205ENST00000562914 TEFMQ96QE5 360 aaKnown RBP15.76■□□□□ 0.11
HERPUD1-205ENST00000562914 PSKH2Q96QS6 385 aa15.76■□□□□ 0.11
HERPUD1-205ENST00000562914 PCDHB18PQ96TA0 734 aa15.76■□□□□ 0.11
HERPUD1-205ENST00000562914 SLC39A8Q9C0K1 460 aa15.76■□□□□ 0.11
HERPUD1-205ENST00000562914 CLSTN2Q9H4D0 955 aa15.76■□□□□ 0.11
HERPUD1-205ENST00000562914 SP110Q9HB58 689 aa15.76■□□□□ 0.11
HERPUD1-205ENST00000562914 NLRC4Q9NPP4 1024 aa15.76■□□□□ 0.11
HERPUD1-205ENST00000562914 FAM207AQ9NSI2 230 aaPredicted RBP15.76■□□□□ 0.11
HERPUD1-205ENST00000562914 SPATS2LQ9NUQ6 558 aaKnown RBP15.76■□□□□ 0.11
HERPUD1-205ENST00000562914 TAAR2Q9P1P5 351 aa15.76■□□□□ 0.11
HERPUD1-205ENST00000562914 ANAPC2Q9UJX6 822 aa15.76■□□□□ 0.11
HERPUD1-205ENST00000562914 TLN1Q9Y490 2541 aaKnown RBP15.76■□□□□ 0.11
HERPUD1-205ENST00000562914 ANKRD36A6QL64 1941 aa15.75■□□□□ 0.11
HERPUD1-205ENST00000562914 PSMD11O00231 422 aa15.75■□□□□ 0.11
HERPUD1-205ENST00000562914 EEF2KO00418 725 aaKnown RBP15.75■□□□□ 0.11
HERPUD1-205ENST00000562914 TEX33O43247 280 aa15.75■□□□□ 0.11
HERPUD1-205ENST00000562914 SOCS5O75159 536 aa15.75■□□□□ 0.11
HERPUD1-205ENST00000562914 ECEL1O95672 775 aa15.75■□□□□ 0.11
HERPUD1-205ENST00000562914 PRKCGP05129 697 aa15.75■□□□□ 0.11
HERPUD1-205ENST00000562914 FGF3P11487 239 aaPredicted RBP15.75■□□□□ 0.11
HERPUD1-205ENST00000562914 GM2AP17900 193 aa15.75■□□□□ 0.11
HERPUD1-205ENST00000562914 MAN1A1P33908 653 aa15.75■□□□□ 0.11
HERPUD1-205ENST00000562914 HSPA9P38646 679 aaKnown RBP15.75■□□□□ 0.11
HERPUD1-205ENST00000562914 CCR10P46092 362 aa15.75■□□□□ 0.11
HERPUD1-205ENST00000562914 RGRP47804 291 aa15.75■□□□□ 0.11
HERPUD1-205ENST00000562914 MAZP56270 477 aaKnown RBP15.75■□□□□ 0.11
HERPUD1-205ENST00000562914 CYP4F2P78329 520 aa15.75■□□□□ 0.11
HERPUD1-205ENST00000562914 GPLD1P80108 840 aa15.75■□□□□ 0.11
HERPUD1-205ENST00000562914 KCNAB2Q13303 367 aa15.75■□□□□ 0.11
HERPUD1-205ENST00000562914 PPP1R15BQ5SWA1 713 aa15.75■□□□□ 0.11
HERPUD1-205ENST00000562914 NRROSQ86YC3 692 aa15.75■□□□□ 0.11
HERPUD1-205ENST00000562914 LZTR1Q8N653 840 aa15.75■□□□□ 0.11
HERPUD1-205ENST00000562914 CCDC74BQ96LY2 380 aa15.75■□□□□ 0.11
HERPUD1-205ENST00000562914 ZNF599Q96NL3 588 aa15.75■□□□□ 0.11
HERPUD1-205ENST00000562914 NUDT22Q9BRQ3 303 aa15.75■□□□□ 0.11
HERPUD1-205ENST00000562914 EFHD1Q9BUP0 239 aa15.75■□□□□ 0.11
HERPUD1-205ENST00000562914 FRMD8Q9BZ67 464 aaPredicted RBP15.75■□□□□ 0.11
HERPUD1-205ENST00000562914 VPS16Q9H269 839 aa15.75■□□□□ 0.11
HERPUD1-205ENST00000562914 TAB2Q9NYJ8 693 aa15.75■□□□□ 0.11
HERPUD1-205ENST00000562914 AP4E1Q9UPM8 1137 aa15.75■□□□□ 0.11
HERPUD1-205ENST00000562914 BSNQ9UPA5 3926 aa15.75■□□□□ 0.11
HERPUD1-205ENST00000562914 ZNF891A8MT65 544 aaPredicted RBP15.74■□□□□ 0.11
HERPUD1-205ENST00000562914 B4E171 279 aa15.74■□□□□ 0.11
HERPUD1-205ENST00000562914 DAPK3O43293 454 aa15.74■□□□□ 0.11
HERPUD1-205ENST00000562914 CEACAM5P06731 702 aa15.74■□□□□ 0.11
HERPUD1-205ENST00000562914 CCDC172P0C7W6 258 aa15.74■□□□□ 0.11
HERPUD1-205ENST00000562914 CYP2A6P11509 494 aaPredicted RBP15.74■□□□□ 0.11
HERPUD1-205ENST00000562914 UGT1A3P35503 534 aa15.74■□□□□ 0.11
HERPUD1-205ENST00000562914 TSPAN7P41732 249 aa15.74■□□□□ 0.11
HERPUD1-205ENST00000562914 SCNN1BP51168 640 aa15.74■□□□□ 0.11
HERPUD1-205ENST00000562914 POLE2P56282 527 aa15.74■□□□□ 0.11
HERPUD1-205ENST00000562914 RPL7AP62424 266 aaKnown RBP15.74■□□□□ 0.11
HERPUD1-205ENST00000562914 DCAF12Q5T6F0 453 aa15.74■□□□□ 0.11
HERPUD1-205ENST00000562914 HEATR4Q86WZ0 1026 aa15.74■□□□□ 0.11
HERPUD1-205ENST00000562914 PSTKQ8IV42 348 aaKnown RBP15.74■□□□□ 0.11
HERPUD1-205ENST00000562914 SFTPA2Q8IWL1 248 aa15.74■□□□□ 0.11
HERPUD1-205ENST00000562914 CACNA2D3Q8IZS8 1091 aa15.74■□□□□ 0.11
HERPUD1-205ENST00000562914 RCBTB1Q8NDN9 531 aa15.74■□□□□ 0.11
HERPUD1-205ENST00000562914 CELF6Q96J87 481 aaKnown RBP15.74■□□□□ 0.11
HERPUD1-205ENST00000562914 B4GALT6Q9UBX8 382 aa15.74■□□□□ 0.11
HERPUD1-205ENST00000562914 PTPN13Q12923 2485 aa15.73■□□□□ 0.11
HERPUD1-205ENST00000562914 IGHV1OR21-1A0A087WYE8 117 aa15.73■□□□□ 0.11
HERPUD1-205ENST00000562914 AGRPO00253 132 aa15.73■□□□□ 0.11
HERPUD1-205ENST00000562914 HTRA2O43464 458 aaPredicted RBP15.73■□□□□ 0.11
HERPUD1-205ENST00000562914 IVLP07476 585 aa15.73■□□□□ 0.11
HERPUD1-205ENST00000562914 THRAP10827 490 aa15.73■□□□□ 0.11
HERPUD1-205ENST00000562914 VIPR1P32241 457 aa15.73■□□□□ 0.11
HERPUD1-205ENST00000562914 CASRP41180 1078 aa15.73■□□□□ 0.11
HERPUD1-205ENST00000562914 HCAR3P49019 387 aa15.73■□□□□ 0.11
HERPUD1-205ENST00000562914 CDK3Q00526 305 aa15.73■□□□□ 0.11
HERPUD1-205ENST00000562914 RALGPS1Q5JS13 557 aa15.73■□□□□ 0.11
HERPUD1-205ENST00000562914 ERMARDQ5T6L9 678 aa15.73■□□□□ 0.11
HERPUD1-205ENST00000562914 TMEM71Q6P5X7 295 aa15.73■□□□□ 0.11
HERPUD1-205ENST00000562914 RFX8Q6ZV50 586 aa15.73■□□□□ 0.11
HERPUD1-205ENST00000562914 NAGSQ8N159 534 aa15.73■□□□□ 0.11
HERPUD1-205ENST00000562914 CBARPQ8N350 705 aaPredicted RBP15.73■□□□□ 0.11
HERPUD1-205ENST00000562914 ENOX1Q8TC92 643 aaKnown RBP15.73■□□□□ 0.11
HERPUD1-205ENST00000562914 ART4Q93070 314 aa15.73■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 74.7 ms