RNA–Protein interactions for RNA: ENST00000562707.5

CMTM3-205, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

APPRIS P1 TSL 3 BASIC

Gene CMTM3, Length 714 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-205ENST00000562707 IQCJ-SCHIP1C9J366 451 aaPredicted RBP16.59■□□□□ 0.25
CMTM3-205ENST00000562707 STMND1H3BQB6 276 aa16.59■□□□□ 0.25
CMTM3-205ENST00000562707 TRAFD1O14545 582 aaPredicted RBP16.59■□□□□ 0.25
CMTM3-205ENST00000562707 TERTO14746 1132 aaKnown RBP16.59■□□□□ 0.25
CMTM3-205ENST00000562707 HGSO14964 777 aaPredicted RBP16.59■□□□□ 0.25
CMTM3-205ENST00000562707 SUV39H1O43463 412 aa16.59■□□□□ 0.25
CMTM3-205ENST00000562707 PPFIA2O75334 1257 aa16.59■□□□□ 0.25
CMTM3-205ENST00000562707 FGF1P05230 155 aa16.59■□□□□ 0.25
CMTM3-205ENST00000562707 CCL4P13236 92 aa16.59■□□□□ 0.25
CMTM3-205ENST00000562707 FERP16591 822 aa16.59■□□□□ 0.25
CMTM3-205ENST00000562707 GM2AP17900 193 aa16.59■□□□□ 0.25
CMTM3-205ENST00000562707 CYP4F2P78329 520 aa16.59■□□□□ 0.25
CMTM3-205ENST00000562707 UBXN1Q04323 297 aa16.59■□□□□ 0.25
CMTM3-205ENST00000562707 LBRQ14739 615 aaKnown RBP16.59■□□□□ 0.25
CMTM3-205ENST00000562707 CA9Q16790 459 aa16.59■□□□□ 0.25
CMTM3-205ENST00000562707 PPP1R2P3Q6NXS1 205 aa16.59■□□□□ 0.25
CMTM3-205ENST00000562707 RFX8Q6ZV50 586 aa16.59■□□□□ 0.25
CMTM3-205ENST00000562707 C17orf82Q86X59 251 aaPredicted RBP16.59■□□□□ 0.25
CMTM3-205ENST00000562707 ARHGAP12Q8IWW6 846 aa16.59■□□□□ 0.25
CMTM3-205ENST00000562707 CCDC112Q8NEF3 446 aa16.59■□□□□ 0.25
CMTM3-205ENST00000562707 JPH3Q8WXH2 748 aaPredicted RBP16.59■□□□□ 0.25
CMTM3-205ENST00000562707 COQ10AQ96MF6 247 aa16.59■□□□□ 0.25
CMTM3-205ENST00000562707 TAAR9Q96RI9 348 aa16.59■□□□□ 0.25
CMTM3-205ENST00000562707 TRNAU1APQ9NX07 287 aaKnown RBP16.59■□□□□ 0.25
CMTM3-205ENST00000562707 TAAR2Q9P1P5 351 aa16.59■□□□□ 0.25
CMTM3-205ENST00000562707 PCSK1NQ9UHG2 260 aa16.59■□□□□ 0.25
CMTM3-205ENST00000562707 CHD5Q8TDI0 1954 aa16.58■□□□□ 0.25
CMTM3-205ENST00000562707 PIEZO2Q9H5I5 2752 aa16.58■□□□□ 0.25
CMTM3-205ENST00000562707 CYSRT1A8MQ03 144 aa16.58■□□□□ 0.24
CMTM3-205ENST00000562707 PRPSAP2O60256 369 aa16.58■□□□□ 0.24
CMTM3-205ENST00000562707 RNF8O76064 485 aa16.58■□□□□ 0.24
CMTM3-205ENST00000562707 ECEL1O95672 775 aa16.58■□□□□ 0.24
CMTM3-205ENST00000562707 CEACAM5P06731 702 aa16.58■□□□□ 0.24
CMTM3-205ENST00000562707 WT1P19544 449 aaPredicted RBP16.58■□□□□ 0.24
CMTM3-205ENST00000562707 TNFAIP3P21580 790 aa16.58■□□□□ 0.24
CMTM3-205ENST00000562707 CD1CP29017 333 aa16.58■□□□□ 0.24
CMTM3-205ENST00000562707 VIPR1P32241 457 aa16.58■□□□□ 0.24
CMTM3-205ENST00000562707 GPR3P46089 330 aa16.58■□□□□ 0.24
CMTM3-205ENST00000562707 GNPDA1P46926 289 aa16.58■□□□□ 0.24
CMTM3-205ENST00000562707 TRA2AQ13595 282 aaKnown RBP eCLIP16.58■□□□□ 0.24
CMTM3-205ENST00000562707 PPP6R3Q5H9R7 873 aaPredicted RBP16.58■□□□□ 0.24
CMTM3-205ENST00000562707 TMCO4Q5TGY1 634 aa16.58■□□□□ 0.24
CMTM3-205ENST00000562707 DENND2CQ68D51 928 aa16.58■□□□□ 0.24
CMTM3-205ENST00000562707 ARHGAP36Q6ZRI8 547 aa16.58■□□□□ 0.24
CMTM3-205ENST00000562707 ZNF438Q7Z4V0 828 aa16.58■□□□□ 0.24
CMTM3-205ENST00000562707 HEATR4Q86WZ0 1026 aa16.58■□□□□ 0.24
CMTM3-205ENST00000562707 NRROSQ86YC3 692 aa16.58■□□□□ 0.24
CMTM3-205ENST00000562707 PELI3Q8N2H9 469 aa16.58■□□□□ 0.24
CMTM3-205ENST00000562707 LZTR1Q8N653 840 aa16.58■□□□□ 0.24
CMTM3-205ENST00000562707 PDCD6IPQ8WUM4 868 aaKnown RBP16.58■□□□□ 0.24
CMTM3-205ENST00000562707 KCTD15Q96SI1 283 aaPredicted RBP16.58■□□□□ 0.24
CMTM3-205ENST00000562707 NUDT22Q9BRQ3 303 aa16.58■□□□□ 0.24
CMTM3-205ENST00000562707 SNRNP25Q9BV90 132 aaKnown RBP16.58■□□□□ 0.24
CMTM3-205ENST00000562707 TEX101Q9BY14 249 aa16.58■□□□□ 0.24
CMTM3-205ENST00000562707 GEMIN8Q9NWZ8 242 aaKnown RBP16.58■□□□□ 0.24
CMTM3-205ENST00000562707 PCDHGC4Q9Y5F7 938 aa16.58■□□□□ 0.24
CMTM3-205ENST00000562707 KIF26BQ2KJY2 2108 aa16.57■□□□□ 0.24
CMTM3-205ENST00000562707 IGHV5-10-1A0A0J9YXX1 117 aa16.57■□□□□ 0.24
CMTM3-205ENST00000562707 GOLGA6CA6NDK9 693 aa16.57■□□□□ 0.24
CMTM3-205ENST00000562707 GOLGA6BA6NDN3 693 aa16.57■□□□□ 0.24
CMTM3-205ENST00000562707 LGALS16A8MUM7 142 aa16.57■□□□□ 0.24
CMTM3-205ENST00000562707 SOCS5O75159 536 aa16.57■□□□□ 0.24
CMTM3-205ENST00000562707 CPP00450 1065 aa16.57■□□□□ 0.24
CMTM3-205ENST00000562707 GOLGA6DP0CG33 693 aa16.57■□□□□ 0.24
CMTM3-205ENST00000562707 CYP2A6P11509 494 aaPredicted RBP16.57■□□□□ 0.24
CMTM3-205ENST00000562707 CDK11BP21127 795 aaKnown RBP16.57■□□□□ 0.24
CMTM3-205ENST00000562707 ZNF135P52742 658 aaPredicted RBP16.57■□□□□ 0.24
CMTM3-205ENST00000562707 MAMLD1Q13495 774 aa16.57■□□□□ 0.24
CMTM3-205ENST00000562707 ZNF235Q14590 738 aa16.57■□□□□ 0.24
CMTM3-205ENST00000562707 NR1D2Q14995 579 aa16.57■□□□□ 0.24
CMTM3-205ENST00000562707 CNGA3Q16281 694 aa16.57■□□□□ 0.24
CMTM3-205ENST00000562707 SLC30A9Q6PML9 568 aa16.57■□□□□ 0.24
CMTM3-205ENST00000562707 ZNF574Q6ZN55 896 aaPredicted RBP16.57■□□□□ 0.24
CMTM3-205ENST00000562707 IL22RA1Q8N6P7 574 aa16.57■□□□□ 0.24
CMTM3-205ENST00000562707 AGBL5Q8NDL9 886 aa16.57■□□□□ 0.24
CMTM3-205ENST00000562707 RCBTB1Q8NDN9 531 aa16.57■□□□□ 0.24
CMTM3-205ENST00000562707 HTR3CQ8WXA8 447 aa16.57■□□□□ 0.24
CMTM3-205ENST00000562707 SPOCK2Q92563 424 aa16.57■□□□□ 0.24
CMTM3-205ENST00000562707 NKD1Q969G9 470 aa16.57■□□□□ 0.24
CMTM3-205ENST00000562707 CCDC74BQ96LY2 380 aa16.57■□□□□ 0.24
CMTM3-205ENST00000562707 ZNF599Q96NL3 588 aa16.57■□□□□ 0.24
CMTM3-205ENST00000562707 FRMD8Q9BZ67 464 aaPredicted RBP16.57■□□□□ 0.24
CMTM3-205ENST00000562707 SLC25A18Q9H1K4 315 aa16.57■□□□□ 0.24
CMTM3-205ENST00000562707 GOLGA6AQ9NYA3 693 aa16.57■□□□□ 0.24
CMTM3-205ENST00000562707 LIMA1Q9UHB6 759 aaKnown RBP16.57■□□□□ 0.24
CMTM3-205ENST00000562707 SUFUQ9UMX1 484 aa16.57■□□□□ 0.24
CMTM3-205ENST00000562707 PCDHGA3Q9Y5H0 932 aa16.57■□□□□ 0.24
CMTM3-205ENST00000562707 MYO18BQ8IUG5 2567 aa16.56■□□□□ 0.24
CMTM3-205ENST00000562707 TMCO5BA8MYB1 307 aa16.56■□□□□ 0.24
CMTM3-205ENST00000562707 HTRA2O43464 458 aaPredicted RBP16.56■□□□□ 0.24
CMTM3-205ENST00000562707 HEXIM1O94992 359 aaKnown RBP16.56■□□□□ 0.24
CMTM3-205ENST00000562707 FUCA1P04066 466 aa16.56■□□□□ 0.24
CMTM3-205ENST00000562707 FGF3P11487 239 aaPredicted RBP16.56■□□□□ 0.24
CMTM3-205ENST00000562707 AK4P27144 223 aaPredicted RBP16.56■□□□□ 0.24
CMTM3-205ENST00000562707 CSTF2P33240 577 aaKnown RBP eCLIP16.56■□□□□ 0.24
CMTM3-205ENST00000562707 HSPA9P38646 679 aaKnown RBP16.56■□□□□ 0.24
CMTM3-205ENST00000562707 HCAR3P49019 387 aa16.56■□□□□ 0.24
CMTM3-205ENST00000562707 LIMK2P53671 638 aa16.56■□□□□ 0.24
CMTM3-205ENST00000562707 CDK3Q00526 305 aa16.56■□□□□ 0.24
CMTM3-205ENST00000562707 CTBSQ01459 385 aa16.56■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms