RNA–Protein interactions for RNA: ENST00000561691.5

TUBGCP4-202, Transcript of tubulin gamma complex associated protein 4, humanhuman

TSL 1 (best)

Gene TUBGCP4, Length 1,928 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBGCP4-202ENST00000561691 LHX3Q9UBR4 397 aa10.26□□□□□ -0.77
TUBGCP4-202ENST00000561691 FBXO5Q9UKT4 447 aa10.26□□□□□ -0.77
TUBGCP4-202ENST00000561691 INSL6Q9Y581 213 aa10.26□□□□□ -0.77
TUBGCP4-202ENST00000561691 CCDC195A0A1B0GUA6 201 aa10.25□□□□□ -0.77
TUBGCP4-202ENST00000561691 TBL1XO60907 577 aa10.25□□□□□ -0.77
TUBGCP4-202ENST00000561691 FGF1P05230 155 aa10.25□□□□□ -0.77
TUBGCP4-202ENST00000561691 BMP1P13497 986 aa10.25□□□□□ -0.77
TUBGCP4-202ENST00000561691 GJA1P17302 382 aa10.25□□□□□ -0.77
TUBGCP4-202ENST00000561691 HLA-DPA1P20036 260 aa10.25□□□□□ -0.77
TUBGCP4-202ENST00000561691 BMPR1AP36894 532 aa10.25□□□□□ -0.77
TUBGCP4-202ENST00000561691 GRIA2P42262 883 aa10.25□□□□□ -0.77
TUBGCP4-202ENST00000561691 LEPRP48357 1165 aaKnown RBP10.25□□□□□ -0.77
TUBGCP4-202ENST00000561691 PSMD7P51665 324 aa10.25□□□□□ -0.77
TUBGCP4-202ENST00000561691 EPHA5P54756 1037 aa10.25□□□□□ -0.77
TUBGCP4-202ENST00000561691 ADARP55265 1226 aaKnown RBP10.25□□□□□ -0.77
TUBGCP4-202ENST00000561691 TIAL1Q01085 375 aaKnown RBP eCLIP10.25□□□□□ -0.77
TUBGCP4-202ENST00000561691 FPGSQ05932 587 aa10.25□□□□□ -0.77
TUBGCP4-202ENST00000561691 SEPT6Q14141 434 aa10.25□□□□□ -0.77
TUBGCP4-202ENST00000561691 GALNT3Q14435 633 aa10.25□□□□□ -0.77
TUBGCP4-202ENST00000561691 CTC1Q2NKJ3 1217 aa10.25□□□□□ -0.77
TUBGCP4-202ENST00000561691 RBM20Q5T481 1227 aaKnown RBP10.25□□□□□ -0.77
TUBGCP4-202ENST00000561691 ZNF470Q6ECI4 717 aa10.25□□□□□ -0.77
TUBGCP4-202ENST00000561691 GALNT7Q86SF2 657 aa10.25□□□□□ -0.77
TUBGCP4-202ENST00000561691 NUDCD3Q8IVD9 361 aa10.25□□□□□ -0.77
TUBGCP4-202ENST00000561691 SLC41A1Q8IVJ1 513 aa10.25□□□□□ -0.77
TUBGCP4-202ENST00000561691 C10orf107Q8IVU9 208 aa10.25□□□□□ -0.77
TUBGCP4-202ENST00000561691 SCUBE1Q8IWY4 988 aa10.25□□□□□ -0.77
TUBGCP4-202ENST00000561691 MRPL43Q8N983 215 aaKnown RBP10.25□□□□□ -0.77
TUBGCP4-202ENST00000561691 SPPL3Q8TCT6 385 aa10.25□□□□□ -0.77
TUBGCP4-202ENST00000561691 HERVK_113Q902F9 699 aa10.25□□□□□ -0.77
TUBGCP4-202ENST00000561691 SORT1Q99523 831 aa10.25□□□□□ -0.77
TUBGCP4-202ENST00000561691 RAD9AQ99638 391 aa10.25□□□□□ -0.77
TUBGCP4-202ENST00000561691 FEM1AQ9BSK4 669 aa10.25□□□□□ -0.77
TUBGCP4-202ENST00000561691 TDRD1Q9BXT4 1180 aaKnown RBP10.25□□□□□ -0.77
TUBGCP4-202ENST00000561691 SLC46A2Q9BY10 475 aa10.25□□□□□ -0.77
TUBGCP4-202ENST00000561691 MFSD1Q9H3U5 465 aa10.25□□□□□ -0.77
TUBGCP4-202ENST00000561691 NDUFA13Q9P0J0 144 aa10.25□□□□□ -0.77
TUBGCP4-202ENST00000561691 TXNDC16Q9P2K2 825 aa10.25□□□□□ -0.77
TUBGCP4-202ENST00000561691 COPG2Q9UBF2 871 aa10.25□□□□□ -0.77
TUBGCP4-202ENST00000561691 ITGB1BP2Q9UKP3 347 aa10.25□□□□□ -0.77
TUBGCP4-202ENST00000561691 SLC39A10Q9ULF5 831 aa10.25□□□□□ -0.77
TUBGCP4-202ENST00000561691 RIMKLBQ9ULI2 386 aa10.25□□□□□ -0.77
TUBGCP4-202ENST00000561691 LZTS1Q9Y250 596 aa10.25□□□□□ -0.77
TUBGCP4-202ENST00000561691 TMED5Q9Y3A6 229 aa10.25□□□□□ -0.77
TUBGCP4-202ENST00000561691 MIA3Q5JRA6 1907 aa10.25□□□□□ -0.77
TUBGCP4-202ENST00000561691 OR51F1A6NGY5 319 aa10.25□□□□□ -0.77
TUBGCP4-202ENST00000561691 INSIG1O15503 277 aa10.25□□□□□ -0.77
TUBGCP4-202ENST00000561691 PHGDHO43175 533 aaKnown RBP10.25□□□□□ -0.77
TUBGCP4-202ENST00000561691 SLC7A4O43246 635 aa10.25□□□□□ -0.77
TUBGCP4-202ENST00000561691 NDST3O95803 873 aa10.25□□□□□ -0.77
TUBGCP4-202ENST00000561691 S1PR4O95977 384 aa10.25□□□□□ -0.77
TUBGCP4-202ENST00000561691 C1RP00736 705 aa10.25□□□□□ -0.77
TUBGCP4-202ENST00000561691 HADHAP40939 763 aa10.25□□□□□ -0.77
TUBGCP4-202ENST00000561691 CLCN4P51793 760 aa10.25□□□□□ -0.77
TUBGCP4-202ENST00000561691 ZNF140P52738 457 aaPredicted RBP10.25□□□□□ -0.77
TUBGCP4-202ENST00000561691 TAS2R39P59534 338 aa10.25□□□□□ -0.77
TUBGCP4-202ENST00000561691 GRM2Q14416 872 aa10.25□□□□□ -0.77
TUBGCP4-202ENST00000561691 SEMA3AQ14563 771 aa10.25□□□□□ -0.77
TUBGCP4-202ENST00000561691 ZNF460Q14592 562 aa10.25□□□□□ -0.77
TUBGCP4-202ENST00000561691 CNSTQ6PJW8 725 aa10.25□□□□□ -0.77
TUBGCP4-202ENST00000561691 LINGO4Q6UY18 593 aa10.25□□□□□ -0.77
TUBGCP4-202ENST00000561691 KIAA0408Q6ZU52 694 aa10.25□□□□□ -0.77
TUBGCP4-202ENST00000561691 NLRP9Q7RTR0 991 aa10.25□□□□□ -0.77
TUBGCP4-202ENST00000561691 RNF135Q8IUD6 432 aa10.25□□□□□ -0.77
TUBGCP4-202ENST00000561691 BBS7Q8IWZ6 715 aa10.25□□□□□ -0.77
TUBGCP4-202ENST00000561691 CPXM2Q8N436 756 aa10.25□□□□□ -0.77
TUBGCP4-202ENST00000561691 HJURPQ8NCD3 748 aaPredicted RBP10.25□□□□□ -0.77
TUBGCP4-202ENST00000561691 SHKBP1Q8TBC3 707 aa10.25□□□□□ -0.77
TUBGCP4-202ENST00000561691 PRR11Q96HE9 360 aaPredicted RBP10.25□□□□□ -0.77
TUBGCP4-202ENST00000561691 EXOC2Q96KP1 924 aa10.25□□□□□ -0.77
TUBGCP4-202ENST00000561691 OLFM1Q99784 485 aa10.25□□□□□ -0.77
TUBGCP4-202ENST00000561691 OMDQ99983 421 aa10.25□□□□□ -0.77
TUBGCP4-202ENST00000561691 TCF25Q9BQ70 676 aa10.25□□□□□ -0.77
TUBGCP4-202ENST00000561691 FBXO6Q9NRD1 293 aaPredicted RBP10.25□□□□□ -0.77
TUBGCP4-202ENST00000561691 HCFC1R1Q9NWW0 138 aa10.25□□□□□ -0.77
TUBGCP4-202ENST00000561691 VPS51Q9UID3 782 aa10.25□□□□□ -0.77
TUBGCP4-202ENST00000561691 SSX2IPQ9Y2D8 614 aa10.25□□□□□ -0.77
TUBGCP4-202ENST00000561691 MTF2Q9Y483 593 aaPredicted RBP10.25□□□□□ -0.77
TUBGCP4-202ENST00000561691 ARL5AQ9Y689 179 aa10.25□□□□□ -0.77
TUBGCP4-202ENST00000561691 FAM95CA0A1B0GW59 222 aa10.24□□□□□ -0.77
TUBGCP4-202ENST00000561691 A0A1W2PRU2 124 aa10.24□□□□□ -0.77
TUBGCP4-202ENST00000561691 CBX4O00257 560 aa10.24□□□□□ -0.77
TUBGCP4-202ENST00000561691 FZD6O60353 706 aa10.24□□□□□ -0.77
TUBGCP4-202ENST00000561691 RNASEH1O60930 286 aaKnown RBP10.24□□□□□ -0.77
TUBGCP4-202ENST00000561691 LYPLA1O75608 230 aaPredicted RBP10.24□□□□□ -0.77
TUBGCP4-202ENST00000561691 MT-CO1P00395 513 aa10.24□□□□□ -0.77
TUBGCP4-202ENST00000561691 SERPINF2P08697 491 aa10.24□□□□□ -0.77
TUBGCP4-202ENST00000561691 PIRTP0C851 137 aa10.24□□□□□ -0.77
TUBGCP4-202ENST00000561691 HOXD12P35452 270 aa10.24□□□□□ -0.77
TUBGCP4-202ENST00000561691 CSKP41240 450 aa10.24□□□□□ -0.77
TUBGCP4-202ENST00000561691 POLD2P49005 469 aa10.24□□□□□ -0.77
TUBGCP4-202ENST00000561691 C1QTNF8P60827 252 aa10.24□□□□□ -0.77
TUBGCP4-202ENST00000561691 TMPRSS15P98073 1019 aa10.24□□□□□ -0.77
TUBGCP4-202ENST00000561691 TRAF2Q12933 501 aa10.24□□□□□ -0.77
TUBGCP4-202ENST00000561691 PTPRRQ15256 657 aa10.24□□□□□ -0.77
TUBGCP4-202ENST00000561691 SLC44A4Q53GD3 710 aa10.24□□□□□ -0.77
TUBGCP4-202ENST00000561691 FYB2Q5VWT5 728 aa10.24□□□□□ -0.77
TUBGCP4-202ENST00000561691 NCEH1Q6PIU2 408 aa10.24□□□□□ -0.77
TUBGCP4-202ENST00000561691 NAPRTQ6XQN6 538 aa10.24□□□□□ -0.77
TUBGCP4-202ENST00000561691 ACAD11Q709F0 780 aa10.24□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms