RNA–Protein interactions for RNA: ENST00000561206.1

USP8-216, Transcript of ubiquitin specific peptidase 8, humanhuman

TSL 2

Gene USP8, Length 556 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP8-216ENST00000561206 ZNF318Q5VUA4 2279 aa3.13□□□□□ -1.91
USP8-216ENST00000561206 PABPN1LA6NDY0 278 aaKnown RBP3.12□□□□□ -1.91
USP8-216ENST00000561206 GOLGA6L9A6NEM1 432 aa3.12□□□□□ -1.91
USP8-216ENST00000561206 FAM90A7PA6NKC0 464 aa3.12□□□□□ -1.91
USP8-216ENST00000561206 FAM90A22PA8MWA6 464 aa3.12□□□□□ -1.91
USP8-216ENST00000561206 FAM90A12PA8MX19 464 aa3.12□□□□□ -1.91
USP8-216ENST00000561206 FAM90A23PA8MXZ1 464 aa3.12□□□□□ -1.91
USP8-216ENST00000561206 DVL1O14640 695 aa3.12□□□□□ -1.91
USP8-216ENST00000561206 SLC2A4P14672 509 aa3.12□□□□□ -1.91
USP8-216ENST00000561206 NR1D1P20393 614 aa3.12□□□□□ -1.91
USP8-216ENST00000561206 EIF2S3P41091 472 aaKnown RBP3.12□□□□□ -1.91
USP8-216ENST00000561206 HTR3AP46098 478 aa3.12□□□□□ -1.91
USP8-216ENST00000561206 HOXA1P49639 335 aaPredicted RBP3.12□□□□□ -1.91
USP8-216ENST00000561206 DVL1P1P54792 670 aaPredicted RBP3.12□□□□□ -1.91
USP8-216ENST00000561206 ITGADQ13349 1161 aa3.12□□□□□ -1.91
USP8-216ENST00000561206 PDSS1Q5T2R2 415 aa3.12□□□□□ -1.91
USP8-216ENST00000561206 SLC35E4Q6ICL7 350 aa3.12□□□□□ -1.91
USP8-216ENST00000561206 RGMBQ6NW40 437 aa3.12□□□□□ -1.91
USP8-216ENST00000561206 KCTD8Q6ZWB6 473 aa3.12□□□□□ -1.91
USP8-216ENST00000561206 KIAA2013Q8IYS2 634 aa3.12□□□□□ -1.91
USP8-216ENST00000561206 TMEM57Q8N5G2 664 aa3.12□□□□□ -1.91
USP8-216ENST00000561206 RUBCNQ92622 972 aa3.12□□□□□ -1.91
USP8-216ENST00000561206 ZNF700Q9H0M5 742 aa3.12□□□□□ -1.91
USP8-216ENST00000561206 FKRPQ9H9S5 495 aa3.12□□□□□ -1.91
USP8-216ENST00000561206 MKKSQ9NPJ1 570 aaPredicted RBP3.12□□□□□ -1.91
USP8-216ENST00000561206 RASSF1Q9NS23 344 aa3.12□□□□□ -1.91
USP8-216ENST00000561206 FAM118AQ9NWS6 357 aa3.12□□□□□ -1.91
USP8-216ENST00000561206 SUFUQ9UMX1 484 aa3.12□□□□□ -1.91
USP8-216ENST00000561206 FAF1Q9UNN5 650 aaPredicted RBP3.12□□□□□ -1.91
USP8-216ENST00000561206 CARD8Q9Y2G2 431 aa3.12□□□□□ -1.91
USP8-216ENST00000561206 KCNK7Q9Y2U2 307 aa3.12□□□□□ -1.91
USP8-216ENST00000561206 STON1Q9Y6Q2 735 aa3.12□□□□□ -1.91
USP8-216ENST00000561206 PRRC2AP48634 2157 aaKnown RBP3.12□□□□□ -1.91
USP8-216ENST00000561206 BLOC1S5-TXNDC5H3BN57 136 aa3.11□□□□□ -1.91
USP8-216ENST00000561206 RTL8CO15255 209 aa3.11□□□□□ -1.91
USP8-216ENST00000561206 WEE2P0C1S8 567 aa3.11□□□□□ -1.91
USP8-216ENST00000561206 ETFAP13804 333 aa3.11□□□□□ -1.91
USP8-216ENST00000561206 MYOD1P15172 320 aa3.11□□□□□ -1.91
USP8-216ENST00000561206 EDN2P20800 178 aa3.11□□□□□ -1.91
USP8-216ENST00000561206 GNL1P36915 607 aaPredicted RBP3.11□□□□□ -1.91
USP8-216ENST00000561206 ACTR2P61160 394 aa3.11□□□□□ -1.91
USP8-216ENST00000561206 UBE4AQ14139 1066 aa3.11□□□□□ -1.91
USP8-216ENST00000561206 CCDC38Q502W7 563 aa3.11□□□□□ -1.91
USP8-216ENST00000561206 LRRC8EQ6NSJ5 796 aa3.11□□□□□ -1.91
USP8-216ENST00000561206 SLC36A4Q6YBV0 504 aa3.11□□□□□ -1.91
USP8-216ENST00000561206 TAOK1Q7L7X3 1001 aa3.11□□□□□ -1.91
USP8-216ENST00000561206 NOXA1Q86UR1 476 aa3.11□□□□□ -1.91
USP8-216ENST00000561206 FAM160B2Q86V87 743 aa3.11□□□□□ -1.91
USP8-216ENST00000561206 RNF113BQ8IZP6 322 aaKnown RBP3.11□□□□□ -1.91
USP8-216ENST00000561206 OR2AK2Q8NG84 335 aa3.11□□□□□ -1.91
USP8-216ENST00000561206 FBXL8Q96CD0 374 aa3.11□□□□□ -1.91
USP8-216ENST00000561206 LTV1Q96GA3 475 aaPredicted RBP3.11□□□□□ -1.91
USP8-216ENST00000561206 ZNF599Q96NL3 588 aa3.11□□□□□ -1.91
USP8-216ENST00000561206 ASCL2Q99929 193 aa3.11□□□□□ -1.91
USP8-216ENST00000561206 DLGAP4Q9Y2H0 992 aa3.11□□□□□ -1.91
USP8-216ENST00000561206 DAAM1Q9Y4D1 1078 aa3.11□□□□□ -1.91
USP8-216ENST00000561206 CCDC194A0A1B0GVG4 234 aa3.1□□□□□ -1.91
USP8-216ENST00000561206 ANP32CO43423 234 aa3.1□□□□□ -1.91
USP8-216ENST00000561206 PCDH7O60245 1069 aa3.1□□□□□ -1.91
USP8-216ENST00000561206 WDR1O75083 606 aa3.1□□□□□ -1.91
USP8-216ENST00000561206 CRLF1O75462 422 aa3.1□□□□□ -1.91
USP8-216ENST00000561206 G6PDP11413 515 aa3.1□□□□□ -1.91
USP8-216ENST00000561206 RXRAP19793 462 aa3.1□□□□□ -1.91
USP8-216ENST00000561206 AGAP20933 346 aa3.1□□□□□ -1.91
USP8-216ENST00000561206 CSRP3P50461 194 aa3.1□□□□□ -1.91
USP8-216ENST00000561206 RAD23BP54727 409 aa3.1□□□□□ -1.91
USP8-216ENST00000561206 HNRNPH2P55795 449 aaKnown RBP3.1□□□□□ -1.91
USP8-216ENST00000561206 CHRNDQ07001 517 aa3.1□□□□□ -1.91
USP8-216ENST00000561206 TBL3Q12788 808 aaKnown RBP3.1□□□□□ -1.91
USP8-216ENST00000561206 KRT24Q2M2I5 525 aa3.1□□□□□ -1.91
USP8-216ENST00000561206 EIF2S3LQ2VIR3 472 aaKnown RBP3.1□□□□□ -1.91
USP8-216ENST00000561206 SIRPB2Q5JXA9 342 aa3.1□□□□□ -1.91
USP8-216ENST00000561206 SPINK14Q6IE38 97 aa3.1□□□□□ -1.91
USP8-216ENST00000561206 C1orf228Q6PIY5 440 aa3.1□□□□□ -1.91
USP8-216ENST00000561206 NOTCH2NLQ7Z3S9 236 aa3.1□□□□□ -1.91
USP8-216ENST00000561206 ZNF34Q8IZ26 560 aa3.1□□□□□ -1.91
USP8-216ENST00000561206 SRBD1Q8N5C6 995 aaKnown RBP3.1□□□□□ -1.91
USP8-216ENST00000561206 BEST2Q8NFU1 509 aa3.1□□□□□ -1.91
USP8-216ENST00000561206 SLC39A13Q96H72 371 aa3.1□□□□□ -1.91
USP8-216ENST00000561206 FSD1Q9BTV5 496 aa3.1□□□□□ -1.91
USP8-216ENST00000561206 ZNF624Q9P2J8 865 aaPredicted RBP3.1□□□□□ -1.91
USP8-216ENST00000561206 RCOR1Q9UKL0 485 aa3.1□□□□□ -1.91
USP8-216ENST00000561206 SH2D7A6NKC9 451 aaPredicted RBP3.09□□□□□ -1.91
USP8-216ENST00000561206 MMP2P08253 660 aa3.09□□□□□ -1.91
USP8-216ENST00000561206 CYC1P08574 325 aa3.09□□□□□ -1.91
USP8-216ENST00000561206 MAOAP21397 527 aa3.09□□□□□ -1.91
USP8-216ENST00000561206 RRM1P23921 792 aa3.09□□□□□ -1.91
USP8-216ENST00000561206 CORO1AP31146 461 aaKnown RBP3.09□□□□□ -1.91
USP8-216ENST00000561206 DRG2P55039 364 aaKnown RBP3.09□□□□□ -1.91
USP8-216ENST00000561206 GAGE5Q13069 117 aa3.09□□□□□ -1.91
USP8-216ENST00000561206 GAGE6Q13070 117 aa3.09□□□□□ -1.91
USP8-216ENST00000561206 BRD3Q15059 726 aa3.09□□□□□ -1.91
USP8-216ENST00000561206 SERTAD4-AS1Q5TG53 156 aa3.09□□□□□ -1.91
USP8-216ENST00000561206 ASB18Q6ZVZ8 466 aa3.09□□□□□ -1.91
USP8-216ENST00000561206 GTSCR1Q86UQ5 136 aa3.09□□□□□ -1.91
USP8-216ENST00000561206 MYLK4Q86YV6 388 aaPredicted RBP3.09□□□□□ -1.91
USP8-216ENST00000561206 SLC35F3Q8IY50 421 aa3.09□□□□□ -1.91
USP8-216ENST00000561206 VPS37AQ8NEZ2 397 aa3.09□□□□□ -1.91
USP8-216ENST00000561206 CEP70Q8NHQ1 597 aa3.09□□□□□ -1.91
USP8-216ENST00000561206 AFG1LQ8WV93 481 aa3.09□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 60.5 ms