RNA–Protein interactions for RNA: ENST00000561076.1

RTF1-207, Transcript of RTF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 3

Gene RTF1, Length 314 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1-207ENST00000561076 SERPINC1P01008 464 aa2.06□□□□□ -2.08
RTF1-207ENST00000561076 KNG1P01042 644 aa2.06□□□□□ -2.08
RTF1-207ENST00000561076 TGFAP01135 160 aa2.06□□□□□ -2.08
RTF1-207ENST00000561076 IGLV1-40P01703 118 aa2.06□□□□□ -2.08
RTF1-207ENST00000561076 HPXP02790 462 aa2.06□□□□□ -2.08
RTF1-207ENST00000561076 C8BP07358 591 aa2.06□□□□□ -2.08
RTF1-207ENST00000561076 ZFYP08048 801 aaPredicted RBP2.06□□□□□ -2.08
RTF1-207ENST00000561076 ABHD2P08910 425 aa2.06□□□□□ -2.08
RTF1-207ENST00000561076 ALDOCP09972 364 aaKnown RBP2.06□□□□□ -2.08
RTF1-207ENST00000561076 LINGO3P0C6S8 592 aa2.06□□□□□ -2.08
RTF1-207ENST00000561076 FAM58BPP0C7Q3 252 aa2.06□□□□□ -2.08
RTF1-207ENST00000561076 EBLN1P0CF75 366 aa2.06□□□□□ -2.08
RTF1-207ENST00000561076 G6PDP11413 515 aa2.06□□□□□ -2.08
RTF1-207ENST00000561076 NEFHP12036 1026 aa2.06□□□□□ -2.08
RTF1-207ENST00000561076 ARSAP15289 507 aa2.06□□□□□ -2.08
RTF1-207ENST00000561076 ZFXP17010 805 aaPredicted RBP2.06□□□□□ -2.08
RTF1-207ENST00000561076 TNFRSF1AP19438 455 aa2.06□□□□□ -2.08
RTF1-207ENST00000561076 ANXA7P20073 488 aaKnown RBP2.06□□□□□ -2.08
RTF1-207ENST00000561076 AHCYP23526 432 aa2.06□□□□□ -2.08
RTF1-207ENST00000561076 PRPH2P23942 346 aa2.06□□□□□ -2.08
RTF1-207ENST00000561076 CYP3A7P24462 503 aa2.06□□□□□ -2.08
RTF1-207ENST00000561076 DNASE1P24855 282 aa2.06□□□□□ -2.08
RTF1-207ENST00000561076 ITGA3P26006 1051 aa2.06□□□□□ -2.08
RTF1-207ENST00000561076 EPHB2P29323 1055 aa2.06□□□□□ -2.08
RTF1-207ENST00000561076 MARCKSP29966 332 aaPredicted RBP2.06□□□□□ -2.08
RTF1-207ENST00000561076 CDC25CP30307 473 aa2.06□□□□□ -2.08
RTF1-207ENST00000561076 CORO1AP31146 461 aaKnown RBP2.06□□□□□ -2.08
RTF1-207ENST00000561076 HTR7P34969 479 aa2.06□□□□□ -2.08
RTF1-207ENST00000561076 PTGER1P34995 402 aa2.06□□□□□ -2.08
RTF1-207ENST00000561076 DEKP35659 375 aaKnown RBP2.06□□□□□ -2.08
RTF1-207ENST00000561076 SOX6P35712 828 aa2.06□□□□□ -2.08
RTF1-207ENST00000561076 GJC1P36383 396 aa2.06□□□□□ -2.08
RTF1-207ENST00000561076 LIPAP38571 399 aa2.06□□□□□ -2.08
RTF1-207ENST00000561076 GDNFP39905 211 aa2.06□□□□□ -2.08
RTF1-207ENST00000561076 KCNJ1P48048 391 aa2.06□□□□□ -2.08
RTF1-207ENST00000561076 PITPNBP48739 271 aa2.06□□□□□ -2.08
RTF1-207ENST00000561076 TRPC1P48995 793 aa2.06□□□□□ -2.08
RTF1-207ENST00000561076 ANXA11P50995 505 aaKnown RBP2.06□□□□□ -2.08
RTF1-207ENST00000561076 CYP2J2P51589 502 aa2.06□□□□□ -2.08
RTF1-207ENST00000561076 ADCY7P51828 1080 aa2.06□□□□□ -2.08
RTF1-207ENST00000561076 CDR1P51861 262 aa2.06□□□□□ -2.08
RTF1-207ENST00000561076 CHN2P52757 468 aa2.06□□□□□ -2.08
RTF1-207ENST00000561076 ARFIP1P53367 373 aa2.06□□□□□ -2.08
RTF1-207ENST00000561076 TPTEP56180 551 aa2.06□□□□□ -2.08
RTF1-207ENST00000561076 ATP5IP56385 69 aaPredicted RBP2.06□□□□□ -2.08
RTF1-207ENST00000561076 C21orf58P58505 322 aa2.06□□□□□ -2.08
RTF1-207ENST00000561076 RPS7P62081 194 aaKnown RBP2.06□□□□□ -2.08
RTF1-207ENST00000561076 B4GALNT1Q00973 533 aa2.06□□□□□ -2.08
RTF1-207ENST00000561076 ELP6Q0PNE2 266 aa2.06□□□□□ -2.08
RTF1-207ENST00000561076 TCF15Q12870 199 aa2.06□□□□□ -2.08
RTF1-207ENST00000561076 OVGP1Q12889 678 aa2.06□□□□□ -2.08
RTF1-207ENST00000561076 TOP3AQ13472 1001 aaPredicted RBP2.06□□□□□ -2.08
RTF1-207ENST00000561076 TRA2AQ13595 282 aaKnown RBP eCLIP2.06□□□□□ -2.08
RTF1-207ENST00000561076 GIT2Q14161 759 aa2.06□□□□□ -2.08
RTF1-207ENST00000561076 FGFBP1Q14512 234 aa2.06□□□□□ -2.08
RTF1-207ENST00000561076 MXD4Q14582 209 aaPredicted RBP2.06□□□□□ -2.08
RTF1-207ENST00000561076 PTPRCAPQ14761 206 aa2.06□□□□□ -2.08
RTF1-207ENST00000561076 KARSQ15046 597 aaKnown RBP2.06□□□□□ -2.08
RTF1-207ENST00000561076 RNPS1Q15287 305 aaKnown RBP2.06□□□□□ -2.08
RTF1-207ENST00000561076 TRADDQ15628 312 aa2.06□□□□□ -2.08
RTF1-207ENST00000561076 SMN1Q16637 294 aaKnown RBP2.06□□□□□ -2.08
RTF1-207ENST00000561076 TBR1Q16650 682 aa2.06□□□□□ -2.08
RTF1-207ENST00000561076 UGCGQ16739 394 aa2.06□□□□□ -2.08
RTF1-207ENST00000561076 FAM187BQ17R55 369 aa2.06□□□□□ -2.08
RTF1-207ENST00000561076 TCTN1Q2MV58 587 aa2.06□□□□□ -2.08
RTF1-207ENST00000561076 AASDHQ4L235 1098 aaPredicted RBP2.06□□□□□ -2.08
RTF1-207ENST00000561076 TAF1BQ53T94 588 aaPredicted RBP2.06□□□□□ -2.08
RTF1-207ENST00000561076 TDRD12Q587J7 1177 aaKnown RBP2.06□□□□□ -2.08
RTF1-207ENST00000561076 C10orf76Q5T2E6 689 aa2.06□□□□□ -2.08
RTF1-207ENST00000561076 RNASEH2BQ5TBB1 312 aaKnown RBP2.06□□□□□ -2.08
RTF1-207ENST00000561076 CES4AQ5XG92 561 aa2.06□□□□□ -2.08
RTF1-207ENST00000561076 FAM90A2PQ658T7 463 aa2.06□□□□□ -2.08
RTF1-207ENST00000561076 ANKS6Q68DC2 871 aa2.06□□□□□ -2.08
RTF1-207ENST00000561076 TMEM211Q6ICI0 200 aa2.06□□□□□ -2.08
RTF1-207ENST00000561076 CENPPQ6IPU0 288 aa2.06□□□□□ -2.08
RTF1-207ENST00000561076 ENPP7Q6UWV6 458 aa2.06□□□□□ -2.08
RTF1-207ENST00000561076 ARSKQ6UWY0 536 aa2.06□□□□□ -2.08
RTF1-207ENST00000561076 C16orf89Q6UX73 402 aa2.06□□□□□ -2.08
RTF1-207ENST00000561076 LINC00114Q6XXX2 140 aa2.06□□□□□ -2.08
RTF1-207ENST00000561076 SLC36A4Q6YBV0 504 aa2.06□□□□□ -2.08
RTF1-207ENST00000561076 MEX3BQ6ZN04 569 aaKnown RBP2.06□□□□□ -2.08
RTF1-207ENST00000561076 MACC1Q6ZN28 852 aa2.06□□□□□ -2.08
RTF1-207ENST00000561076 TAOK1Q7L7X3 1001 aa2.06□□□□□ -2.08
RTF1-207ENST00000561076 TRAPPC11Q7Z392 1133 aa2.06□□□□□ -2.08
RTF1-207ENST00000561076 TMEM173Q86WV6 379 aaPredicted RBP2.06□□□□□ -2.08
RTF1-207ENST00000561076 UNC5CLQ8IV45 518 aa2.06□□□□□ -2.08
RTF1-207ENST00000561076 SPNS2Q8IVW8 549 aa2.06□□□□□ -2.08
RTF1-207ENST00000561076 DHX40Q8IX18 779 aaKnown RBP2.06□□□□□ -2.08
RTF1-207ENST00000561076 IQCF2Q8IXL9 164 aa2.06□□□□□ -2.08
RTF1-207ENST00000561076 C16orf71Q8IYS4 520 aaPredicted RBP2.06□□□□□ -2.08
RTF1-207ENST00000561076 SHISA5Q8N114 240 aa2.06□□□□□ -2.08
RTF1-207ENST00000561076 BCL6BQ8N143 479 aaPredicted RBP2.06□□□□□ -2.08
RTF1-207ENST00000561076 FBXO39Q8N4B4 442 aa2.06□□□□□ -2.08
RTF1-207ENST00000561076 FAM133AQ8N9E0 248 aa2.06□□□□□ -2.08
RTF1-207ENST00000561076 SCAIQ8N9R8 606 aa2.06□□□□□ -2.08
RTF1-207ENST00000561076 CHST13Q8NET6 341 aa2.06□□□□□ -2.08
RTF1-207ENST00000561076 SLC24A4Q8NFF2 622 aa2.06□□□□□ -2.08
RTF1-207ENST00000561076 CCDC148Q8NFR7 591 aa2.06□□□□□ -2.08
RTF1-207ENST00000561076 OR56B2PQ8NGI1 322 aa2.06□□□□□ -2.08
RTF1-207ENST00000561076 CFAP61Q8NHU2 1237 aa2.06□□□□□ -2.08
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms