RNA–Protein interactions for RNA: ENST00000560998.5

RABGGTA-220, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 5

Gene RABGGTA, Length 1,997 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-220ENST00000560998 HASPINQ8TF76 798 aa14□□□□□ -0.17
RABGGTA-220ENST00000560998 ZIC5Q96T25 663 aa14□□□□□ -0.17
RABGGTA-220ENST00000560998 ADAM2Q99965 735 aa14□□□□□ -0.17
RABGGTA-220ENST00000560998 ADI1Q9BV57 179 aa14□□□□□ -0.17
RABGGTA-220ENST00000560998 TKTL2Q9H0I9 626 aa14□□□□□ -0.17
RABGGTA-220ENST00000560998 HMG20AQ9NP66 347 aa14□□□□□ -0.17
RABGGTA-220ENST00000560998 TMEM216Q9P0N5 145 aa14□□□□□ -0.17
RABGGTA-220ENST00000560998 SLC17A6Q9P2U8 582 aa14□□□□□ -0.17
RABGGTA-220ENST00000560998 TANC1Q9C0D5 1861 aa14□□□□□ -0.17
RABGGTA-220ENST00000560998 HEATR9A2RTY3 570 aa14□□□□□ -0.17
RABGGTA-220ENST00000560998 CLDN25C9JDP6 229 aa14□□□□□ -0.17
RABGGTA-220ENST00000560998 CSPG5O95196 566 aa14□□□□□ -0.17
RABGGTA-220ENST00000560998 MAGEA12P43365 314 aa14□□□□□ -0.17
RABGGTA-220ENST00000560998 PRAMEP78395 509 aa14□□□□□ -0.17
RABGGTA-220ENST00000560998 MERTKQ12866 999 aa14□□□□□ -0.17
RABGGTA-220ENST00000560998 MAPRE2Q15555 327 aa14□□□□□ -0.17
RABGGTA-220ENST00000560998 SLC36A3Q495N2 470 aa14□□□□□ -0.17
RABGGTA-220ENST00000560998 C6orf183Q5T699 404 aa14□□□□□ -0.17
RABGGTA-220ENST00000560998 CCSAPQ6IQ19 270 aaPredicted RBP14□□□□□ -0.17
RABGGTA-220ENST00000560998 HMBOX1Q6NT76 420 aa14□□□□□ -0.17
RABGGTA-220ENST00000560998 CHSY3Q70JA7 882 aa14□□□□□ -0.17
RABGGTA-220ENST00000560998 LRRTM3Q86VH5 581 aa14□□□□□ -0.17
RABGGTA-220ENST00000560998 SLC7A5P1Q8MH63 180 aa14□□□□□ -0.17
RABGGTA-220ENST00000560998 S100ZQ8WXG8 99 aa14□□□□□ -0.17
RABGGTA-220ENST00000560998 SEPT8Q92599 483 aa14□□□□□ -0.17
RABGGTA-220ENST00000560998 SLCO4A1Q96BD0 722 aa14□□□□□ -0.17
RABGGTA-220ENST00000560998 HDAC11Q96DB2 347 aa14□□□□□ -0.17
RABGGTA-220ENST00000560998 NRBF2Q96F24 287 aa14□□□□□ -0.17
RABGGTA-220ENST00000560998 FEM1CQ96JP0 617 aa14□□□□□ -0.17
RABGGTA-220ENST00000560998 TMEM209Q96SK2 561 aa14□□□□□ -0.17
RABGGTA-220ENST00000560998 EHD1Q9H4M9 534 aa14□□□□□ -0.17
RABGGTA-220ENST00000560998 C20orf96Q9NUD7 363 aaPredicted RBP14□□□□□ -0.17
RABGGTA-220ENST00000560998 OR12D3Q9UGF7 316 aa14□□□□□ -0.17
RABGGTA-220ENST00000560998 CDYLQ9Y232 598 aa14□□□□□ -0.17
RABGGTA-220ENST00000560998 RGS13O14921 159 aa13.99□□□□□ -0.17
RABGGTA-220ENST00000560998 TRIM24O15164 1050 aa13.99□□□□□ -0.17
RABGGTA-220ENST00000560998 MTSS1O43312 755 aa13.99□□□□□ -0.17
RABGGTA-220ENST00000560998 LRIG2O94898 1065 aa13.99□□□□□ -0.17
RABGGTA-220ENST00000560998 AP2A1O95782 977 aa13.99□□□□□ -0.17
RABGGTA-220ENST00000560998 FGFR3P22607 806 aa13.99□□□□□ -0.17
RABGGTA-220ENST00000560998 CCND3P30281 292 aaPredicted RBP13.99□□□□□ -0.17
RABGGTA-220ENST00000560998 MSX2P35548 267 aaPredicted RBP13.99□□□□□ -0.17
RABGGTA-220ENST00000560998 PSME3P61289 254 aa13.99□□□□□ -0.17
RABGGTA-220ENST00000560998 PRKCZQ05513 592 aa13.99□□□□□ -0.17
RABGGTA-220ENST00000560998 TRIM71Q2Q1W2 868 aaKnown RBP13.99□□□□□ -0.17
RABGGTA-220ENST00000560998 KCTD8Q6ZWB6 473 aa13.99□□□□□ -0.17
RABGGTA-220ENST00000560998 NEK10Q6ZWH5 1172 aa13.99□□□□□ -0.17
RABGGTA-220ENST00000560998 ITIH5Q86UX2 942 aa13.99□□□□□ -0.17
RABGGTA-220ENST00000560998 CPNE9Q8IYJ1 553 aa13.99□□□□□ -0.17
RABGGTA-220ENST00000560998 CADM3Q8N126 398 aa13.99□□□□□ -0.17
RABGGTA-220ENST00000560998 TMCO5AQ8N6Q1 288 aa13.99□□□□□ -0.17
RABGGTA-220ENST00000560998 RNF148Q8N7C7 305 aa13.99□□□□□ -0.17
RABGGTA-220ENST00000560998 SNX31Q8N9S9 440 aa13.99□□□□□ -0.17
RABGGTA-220ENST00000560998 HPS1Q92902 700 aa13.99□□□□□ -0.17
RABGGTA-220ENST00000560998 MAGED4Q96JG8 741 aa13.99□□□□□ -0.17
RABGGTA-220ENST00000560998 UROC1Q96N76 676 aa13.99□□□□□ -0.17
RABGGTA-220ENST00000560998 ARPC5LQ9BPX5 153 aa13.99□□□□□ -0.17
RABGGTA-220ENST00000560998 KLHL25Q9H0H3 589 aa13.99□□□□□ -0.17
RABGGTA-220ENST00000560998 RMND5AQ9H871 391 aa13.99□□□□□ -0.17
RABGGTA-220ENST00000560998 NANOGQ9H9S0 305 aa13.99□□□□□ -0.17
RABGGTA-220ENST00000560998 SMOXQ9NWM0 555 aa13.99□□□□□ -0.17
RABGGTA-220ENST00000560998 ADA2Q9NZK5 511 aa13.99□□□□□ -0.17
RABGGTA-220ENST00000560998 PSME2Q9UL46 239 aa13.99□□□□□ -0.17
RABGGTA-220ENST00000560998 NUP205Q92621 2012 aa13.99□□□□□ -0.17
RABGGTA-220ENST00000560998 SHROOM3Q8TF72 1996 aa13.99□□□□□ -0.17
RABGGTA-220ENST00000560998 C1orf232A0A0U1RR37 186 aa13.98□□□□□ -0.17
RABGGTA-220ENST00000560998 ZBTB24O43167 697 aaPredicted RBP13.98□□□□□ -0.17
RABGGTA-220ENST00000560998 TRIM13O60858 407 aa13.98□□□□□ -0.17
RABGGTA-220ENST00000560998 APOA4P06727 396 aa13.98□□□□□ -0.17
RABGGTA-220ENST00000560998 HLCSP50747 726 aa13.98□□□□□ -0.17
RABGGTA-220ENST00000560998 KPNA1P52294 538 aaPredicted RBP13.98□□□□□ -0.17
RABGGTA-220ENST00000560998 MPP1Q00013 466 aa13.98□□□□□ -0.17
RABGGTA-220ENST00000560998 GNA12Q03113 381 aa13.98□□□□□ -0.17
RABGGTA-220ENST00000560998 OCA2Q04671 838 aa13.98□□□□□ -0.17
RABGGTA-220ENST00000560998 PRKCQQ04759 706 aa13.98□□□□□ -0.17
RABGGTA-220ENST00000560998 OLIG2Q13516 323 aa13.98□□□□□ -0.17
RABGGTA-220ENST00000560998 FAM26DQ5JW98 314 aa13.98□□□□□ -0.17
RABGGTA-220ENST00000560998 SPANXN3Q5MJ09 141 aa13.98□□□□□ -0.17
RABGGTA-220ENST00000560998 OVOS1Q6IE37 1185 aa13.98□□□□□ -0.17
RABGGTA-220ENST00000560998 BEND5Q7L4P6 421 aa13.98□□□□□ -0.17
RABGGTA-220ENST00000560998 MMAAQ8IVH4 418 aaKnown RBP13.98□□□□□ -0.17
RABGGTA-220ENST00000560998 ZC3H7AQ8IWR0 971 aaKnown RBP13.98□□□□□ -0.17
RABGGTA-220ENST00000560998 GOLM1Q8NBJ4 401 aa13.98□□□□□ -0.17
RABGGTA-220ENST00000560998 OR52K1Q8NGK4 314 aa13.98□□□□□ -0.17
RABGGTA-220ENST00000560998 ZSCAN18Q8TBC5 510 aaPredicted RBP13.98□□□□□ -0.17
RABGGTA-220ENST00000560998 TMA16Q96EY4 203 aaKnown RBP13.98□□□□□ -0.17
RABGGTA-220ENST00000560998 SUSD3Q96L08 255 aa13.98□□□□□ -0.17
RABGGTA-220ENST00000560998 C9orf16Q9BUW7 83 aa13.98□□□□□ -0.17
RABGGTA-220ENST00000560998 NOL11Q9H8H0 719 aaKnown RBP13.98□□□□□ -0.17
RABGGTA-220ENST00000560998 TRHDEQ9UKU6 1024 aa13.98□□□□□ -0.17
RABGGTA-220ENST00000560998 TCAF1Q9Y4C2 921 aa13.98□□□□□ -0.17
RABGGTA-220ENST00000560998 PCDHGA7Q9Y5G6 932 aa13.98□□□□□ -0.17
RABGGTA-220ENST00000560998 TLL2Q9Y6L7 1015 aa13.98□□□□□ -0.17
RABGGTA-220ENST00000560998 CASP8AP2Q9UKL3 1982 aa13.98□□□□□ -0.17
RABGGTA-220ENST00000560998 TCAF2A6NFQ2 919 aa13.98□□□□□ -0.17
RABGGTA-220ENST00000560998 STX16-NPEPL1H3BU86 382 aa13.98□□□□□ -0.17
RABGGTA-220ENST00000560998 SOCS2O14508 198 aa13.98□□□□□ -0.17
RABGGTA-220ENST00000560998 AREL1O15033 823 aa13.98□□□□□ -0.17
RABGGTA-220ENST00000560998 PARNO95453 639 aaKnown RBP13.98□□□□□ -0.17
RABGGTA-220ENST00000560998 IGLV3-25P01717 112 aa13.98□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms