RNA–Protein interactions for RNA: ENST00000560462.1

HERC1-208, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 2

Gene HERC1, Length 647 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-208ENST00000560462 CXorf38Q8TB03 319 aa6.48□□□□□ -1.37
HERC1-208ENST00000560462 CT55Q8WUE5 264 aa6.48□□□□□ -1.37
HERC1-208ENST00000560462 SMARCD1Q96GM5 515 aa6.48□□□□□ -1.37
HERC1-208ENST00000560462 LMLNQ96KR4 655 aa6.48□□□□□ -1.37
HERC1-208ENST00000560462 NT5C1BQ96P26 610 aa6.48□□□□□ -1.37
HERC1-208ENST00000560462 IPO9Q96P70 1041 aaKnown RBP6.48□□□□□ -1.37
HERC1-208ENST00000560462 MED10Q9BTT4 135 aa6.48□□□□□ -1.37
HERC1-208ENST00000560462 C19orf24Q9BVV8 132 aa6.48□□□□□ -1.37
HERC1-208ENST00000560462 ZDHHC6Q9H6R6 413 aa6.48□□□□□ -1.37
HERC1-208ENST00000560462 DYRK4Q9NR20 520 aa6.48□□□□□ -1.37
HERC1-208ENST00000560462 PADI1Q9ULC6 663 aa6.48□□□□□ -1.37
HERC1-208ENST00000560462 PCDHB10Q9UN67 800 aa6.48□□□□□ -1.37
HERC1-208ENST00000560462 RBM8AQ9Y5S9 174 aaKnown RBP6.48□□□□□ -1.37
HERC1-208ENST00000560462 NYNRINQ9P2P1 1898 aaKnown RBP6.47□□□□□ -1.37
HERC1-208ENST00000560462 TRAV20A0A0B4J274 112 aa6.47□□□□□ -1.37
HERC1-208ENST00000560462 ANKRD34BA5PLL1 514 aa6.47□□□□□ -1.37
HERC1-208ENST00000560462 DRGXA6NNA5 263 aa6.47□□□□□ -1.37
HERC1-208ENST00000560462 A8MU76 341 aa6.47□□□□□ -1.37
HERC1-208ENST00000560462 H0YCG3 227 aa6.47□□□□□ -1.37
HERC1-208ENST00000560462 H7C1Q1 480 aa6.47□□□□□ -1.37
HERC1-208ENST00000560462 KPNA3O00505 521 aaPredicted RBP6.47□□□□□ -1.37
HERC1-208ENST00000560462 PCDH17O14917 1159 aa6.47□□□□□ -1.37
HERC1-208ENST00000560462 RGS9O75916 674 aaPredicted RBP6.47□□□□□ -1.37
HERC1-208ENST00000560462 MOCS3O95396 460 aa6.47□□□□□ -1.37
HERC1-208ENST00000560462 PIGRP01833 764 aa6.47□□□□□ -1.37
HERC1-208ENST00000560462 PGRP06401 933 aa6.47□□□□□ -1.37
HERC1-208ENST00000560462 PLS3P13797 630 aa6.47□□□□□ -1.37
HERC1-208ENST00000560462 CPEP16870 476 aa6.47□□□□□ -1.37
HERC1-208ENST00000560462 IGFBP2P18065 325 aa6.47□□□□□ -1.37
HERC1-208ENST00000560462 PTPN4P29074 926 aa6.47□□□□□ -1.37
HERC1-208ENST00000560462 PDIA3P30101 505 aaKnown RBP6.47□□□□□ -1.37
HERC1-208ENST00000560462 PMS1P54277 932 aaKnown RBP6.47□□□□□ -1.37
HERC1-208ENST00000560462 SLC12A3P55017 1021 aa6.47□□□□□ -1.37
HERC1-208ENST00000560462 CASP6P55212 293 aa6.47□□□□□ -1.37
HERC1-208ENST00000560462 YPEL5P62699 121 aa6.47□□□□□ -1.37
HERC1-208ENST00000560462 KCNAB1Q14722 419 aa6.47□□□□□ -1.37
HERC1-208ENST00000560462 NR1D2Q14995 579 aa6.47□□□□□ -1.37
HERC1-208ENST00000560462 C21orf62-AS1Q17RA5 79 aa6.47□□□□□ -1.37
HERC1-208ENST00000560462 DEFB113Q30KQ7 82 aa6.47□□□□□ -1.37
HERC1-208ENST00000560462 BMP2KLQ5H9B9 411 aa6.47□□□□□ -1.37
HERC1-208ENST00000560462 ADGRF1Q5T601 910 aa6.47□□□□□ -1.37
HERC1-208ENST00000560462 TMEM71Q6P5X7 295 aa6.47□□□□□ -1.37
HERC1-208ENST00000560462 GFRALQ6UXV0 394 aa6.47□□□□□ -1.37
HERC1-208ENST00000560462 MED25Q71SY5 747 aa6.47□□□□□ -1.37
HERC1-208ENST00000560462 TECPR1Q7Z6L1 1165 aa6.47□□□□□ -1.37
HERC1-208ENST00000560462 AFAP1L2Q8N4X5 818 aa6.47□□□□□ -1.37
HERC1-208ENST00000560462 ATP11CQ8NB49 1132 aa6.47□□□□□ -1.37
HERC1-208ENST00000560462 FIBINQ8TAL6 211 aa6.47□□□□□ -1.37
HERC1-208ENST00000560462 CACTINQ8WUQ7 758 aaKnown RBP6.47□□□□□ -1.37
HERC1-208ENST00000560462 RUFY2Q8WXA3 655 aa6.47□□□□□ -1.37
HERC1-208ENST00000560462 TSACCQ96A04 125 aaPredicted RBP6.47□□□□□ -1.37
HERC1-208ENST00000560462 SCARF2Q96GP6 870 aaPredicted RBP6.47□□□□□ -1.37
HERC1-208ENST00000560462 HPDLQ96IR7 371 aa6.47□□□□□ -1.37
HERC1-208ENST00000560462 EXOC2Q96KP1 924 aa6.47□□□□□ -1.37
HERC1-208ENST00000560462 TCEANC2Q96MN5 208 aa6.47□□□□□ -1.37
HERC1-208ENST00000560462 MRPL45Q9BRJ2 306 aaKnown RBP6.47□□□□□ -1.37
HERC1-208ENST00000560462 GPR87Q9BY21 358 aa6.47□□□□□ -1.37
HERC1-208ENST00000560462 POLDIP3Q9BY77 421 aaKnown RBP6.47□□□□□ -1.37
HERC1-208ENST00000560462 DPEP2Q9H4A9 486 aa6.47□□□□□ -1.37
HERC1-208ENST00000560462 STMN3Q9NZ72 180 aa6.47□□□□□ -1.37
HERC1-208ENST00000560462 MARCH2Q9P0N8 246 aa6.47□□□□□ -1.37
HERC1-208ENST00000560462 KCNN3Q9UGI6 736 aa6.47□□□□□ -1.37
HERC1-208ENST00000560462 VPS51Q9UID3 782 aa6.47□□□□□ -1.37
HERC1-208ENST00000560462 CACNA1CQ13936 2221 aa6.46□□□□□ -1.37
HERC1-208ENST00000560462 ELOA3CA0A087WX78 387 aaPredicted RBP6.46□□□□□ -1.38
HERC1-208ENST00000560462 ELOA3DA6NLF2 546 aaPredicted RBP6.46□□□□□ -1.38
HERC1-208ENST00000560462 MCF2LO15068 1137 aa6.46□□□□□ -1.38
HERC1-208ENST00000560462 CREB3O43889 395 aa6.46□□□□□ -1.38
HERC1-208ENST00000560462 NEMFO60524 1076 aa6.46□□□□□ -1.38
HERC1-208ENST00000560462 KIAA0754O94854 1291 aa6.46□□□□□ -1.38
HERC1-208ENST00000560462 SLFN14P0C7P3 912 aa6.46□□□□□ -1.38
HERC1-208ENST00000560462 MUTP22033 750 aa6.46□□□□□ -1.38
HERC1-208ENST00000560462 LPOP22079 712 aaPredicted RBP6.46□□□□□ -1.38
HERC1-208ENST00000560462 TSFMP43897 325 aaKnown RBP6.46□□□□□ -1.38
HERC1-208ENST00000560462 GPR3P46089 330 aa6.46□□□□□ -1.38
HERC1-208ENST00000560462 RRADP55042 308 aa6.46□□□□□ -1.38
HERC1-208ENST00000560462 MAZP56270 477 aaKnown RBP6.46□□□□□ -1.38
HERC1-208ENST00000560462 POU5F1Q01860 360 aaKnown RBP6.46□□□□□ -1.38
HERC1-208ENST00000560462 CHD3Q12873 2000 aaKnown RBP6.46□□□□□ -1.38
HERC1-208ENST00000560462 CDC16Q13042 620 aa6.46□□□□□ -1.38
HERC1-208ENST00000560462 MYBPHQ13203 477 aa6.46□□□□□ -1.38
HERC1-208ENST00000560462 BIRC2Q13490 618 aa6.46□□□□□ -1.38
HERC1-208ENST00000560462 ALG11Q2TAA5 492 aa6.46□□□□□ -1.38
HERC1-208ENST00000560462 ELOA3BQ3SY89 546 aa6.46□□□□□ -1.38
HERC1-208ENST00000560462 ZC3H12AQ5D1E8 599 aaKnown RBP6.46□□□□□ -1.38
HERC1-208ENST00000560462 FOXB2Q5VYV0 432 aa6.46□□□□□ -1.38
HERC1-208ENST00000560462 SPECC1LQ69YQ0 1117 aa6.46□□□□□ -1.38
HERC1-208ENST00000560462 ADALQ6DHV7 355 aa6.46□□□□□ -1.38
HERC1-208ENST00000560462 MMS22LQ6ZRQ5 1243 aa6.46□□□□□ -1.38
HERC1-208ENST00000560462 CHSY3Q70JA7 882 aa6.46□□□□□ -1.38
HERC1-208ENST00000560462 TAF8Q7Z7C8 310 aa6.46□□□□□ -1.38
HERC1-208ENST00000560462 WDR49Q8IV35 697 aa6.46□□□□□ -1.38
HERC1-208ENST00000560462 MCATQ8IVS2 390 aaKnown RBP6.46□□□□□ -1.38
HERC1-208ENST00000560462 PPM1NQ8N819 430 aa6.46□□□□□ -1.38
HERC1-208ENST00000560462 BCORP1Q8N888 145 aa6.46□□□□□ -1.38
HERC1-208ENST00000560462 DENND6BQ8NEG7 585 aa6.46□□□□□ -1.38
HERC1-208ENST00000560462 ZMIZ2Q8NF64 920 aa6.46□□□□□ -1.38
HERC1-208ENST00000560462 ELOA3Q8NG57 546 aa6.46□□□□□ -1.38
HERC1-208ENST00000560462 FRS2Q8WU20 508 aa6.46□□□□□ -1.38
HERC1-208ENST00000560462 RBM15Q96T37 977 aaKnown RBP eCLIP6.46□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms