RNA–Protein interactions for RNA: ENST00000559222.5

CASC4-209, Transcript of cancer susceptibility 4, humanhuman

TSL 3

Gene CASC4, Length 742 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-209ENST00000559222 CDK18Q07002 472 aa18.72■□□□□ 0.59
CASC4-209ENST00000559222 OVGP1Q12889 678 aa18.72■□□□□ 0.59
CASC4-209ENST00000559222 EIF2B5Q13144 721 aaKnown RBP18.72■□□□□ 0.59
CASC4-209ENST00000559222 INPP5AQ14642 412 aa18.72■□□□□ 0.59
CASC4-209ENST00000559222 ZNF569Q5MCW4 686 aa18.72■□□□□ 0.59
CASC4-209ENST00000559222 KANSL1Q7Z3B3 1105 aa18.72■□□□□ 0.59
CASC4-209ENST00000559222 PRUNE1Q86TP1 453 aa18.72■□□□□ 0.59
CASC4-209ENST00000559222 NAXDQ8IW45 347 aa18.72■□□□□ 0.59
CASC4-209ENST00000559222 FAM71DQ8N9W8 422 aa18.72■□□□□ 0.59
CASC4-209ENST00000559222 EID2BQ96D98 161 aa18.72■□□□□ 0.59
CASC4-209ENST00000559222 NUS1Q96E22 293 aa18.72■□□□□ 0.59
CASC4-209ENST00000559222 DTD2Q96FN9 168 aa18.72■□□□□ 0.59
CASC4-209ENST00000559222 TMEM121Q9BTD3 319 aa18.72■□□□□ 0.59
CASC4-209ENST00000559222 TCEAL2Q9H3H9 227 aaPredicted RBP18.72■□□□□ 0.59
CASC4-209ENST00000559222 SMARCAL1Q9NZC9 954 aa18.72■□□□□ 0.59
CASC4-209ENST00000559222 ANKRD66B4E2M5 251 aa18.71■□□□□ 0.59
CASC4-209ENST00000559222 LIASO43766 372 aa18.71■□□□□ 0.59
CASC4-209ENST00000559222 ATP1A1P05023 1023 aaKnown RBP18.71■□□□□ 0.59
CASC4-209ENST00000559222 ZNF883P0CG24 379 aa18.71■□□□□ 0.59
CASC4-209ENST00000559222 CA4P22748 312 aa18.71■□□□□ 0.59
CASC4-209ENST00000559222 RABIFP47224 123 aa18.71■□□□□ 0.59
CASC4-209ENST00000559222 STC1P52823 247 aa18.71■□□□□ 0.59
CASC4-209ENST00000559222 RPL26P61254 145 aaKnown RBP18.71■□□□□ 0.59
CASC4-209ENST00000559222 SNX1Q13596 522 aa18.71■□□□□ 0.59
CASC4-209ENST00000559222 SLC14A2Q15849 920 aa18.71■□□□□ 0.59
CASC4-209ENST00000559222 PSAPL1Q6NUJ1 521 aa18.71■□□□□ 0.59
CASC4-209ENST00000559222 LYSMD3Q7Z3D4 306 aa18.71■□□□□ 0.59
CASC4-209ENST00000559222 TECPR1Q7Z6L1 1165 aa18.71■□□□□ 0.59
CASC4-209ENST00000559222 TAB3Q8N5C8 712 aaPredicted RBP18.71■□□□□ 0.59
CASC4-209ENST00000559222 TTC13Q8NBP0 860 aa18.71■□□□□ 0.59
CASC4-209ENST00000559222 IPMKQ8NFU5 416 aa18.71■□□□□ 0.59
CASC4-209ENST00000559222 SAP25Q8TEE9 199 aa18.71■□□□□ 0.59
CASC4-209ENST00000559222 SKA1Q96BD8 255 aa18.71■□□□□ 0.59
CASC4-209ENST00000559222 SPATA13Q96N96 652 aa18.71■□□□□ 0.59
CASC4-209ENST00000559222 VAT1Q99536 393 aa18.71■□□□□ 0.59
CASC4-209ENST00000559222 C1QTNF7Q9BXJ2 289 aa18.71■□□□□ 0.59
CASC4-209ENST00000559222 ERVMER34-1Q9H9K5 563 aa18.71■□□□□ 0.59
CASC4-209ENST00000559222 UCKL1Q9NWZ5 548 aa18.71■□□□□ 0.59
CASC4-209ENST00000559222 FAM153AQ9UHL3 310 aa18.71■□□□□ 0.59
CASC4-209ENST00000559222 TRHDEQ9UKU6 1024 aa18.71■□□□□ 0.59
CASC4-209ENST00000559222 RPL26L1Q9UNX3 145 aaKnown RBP18.71■□□□□ 0.59
CASC4-209ENST00000559222 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP18.71■□□□□ 0.59
CASC4-209ENST00000559222 C1orf232A0A0U1RR37 186 aa18.7■□□□□ 0.58
CASC4-209ENST00000559222 SPTY2D1-AS1A0A0U1RR47 76 aa18.7■□□□□ 0.58
CASC4-209ENST00000559222 AURKAO14965 403 aa18.7■□□□□ 0.58
CASC4-209ENST00000559222 SCAMP1O15126 338 aa18.7■□□□□ 0.58
CASC4-209ENST00000559222 ZSCAN12O43309 604 aa18.7■□□□□ 0.58
CASC4-209ENST00000559222 CEP104O60308 925 aa18.7■□□□□ 0.58
CASC4-209ENST00000559222 KCNK5O95279 499 aa18.7■□□□□ 0.58
CASC4-209ENST00000559222 SOD1P00441 154 aa18.7■□□□□ 0.58
CASC4-209ENST00000559222 SLC4A1P02730 911 aa18.7■□□□□ 0.58
CASC4-209ENST00000559222 SDHBP21912 280 aa18.7■□□□□ 0.58
CASC4-209ENST00000559222 NOVA1P51513 510 aaKnown RBP18.7■□□□□ 0.58
CASC4-209ENST00000559222 ARHGEF7Q14155 803 aa18.7■□□□□ 0.58
CASC4-209ENST00000559222 OASLQ15646 514 aaKnown RBP18.7■□□□□ 0.58
CASC4-209ENST00000559222 PPM1JQ5JR12 505 aa18.7■□□□□ 0.58
CASC4-209ENST00000559222 FAXCQ5TGI0 409 aa18.7■□□□□ 0.58
CASC4-209ENST00000559222 RBFAQ8N0V3 343 aa18.7■□□□□ 0.58
CASC4-209ENST00000559222 C17orf53Q8N3J3 647 aaPredicted RBP18.7■□□□□ 0.58
CASC4-209ENST00000559222 SLC25A41Q8N5S1 370 aa18.7■□□□□ 0.58
CASC4-209ENST00000559222 SCAMP4Q969E2 229 aa18.7■□□□□ 0.58
CASC4-209ENST00000559222 WDR24Q96S15 920 aa18.7■□□□□ 0.58
CASC4-209ENST00000559222 LYSMD1Q96S90 227 aa18.7■□□□□ 0.58
CASC4-209ENST00000559222 AGAP2Q99490 1192 aa18.7■□□□□ 0.58
CASC4-209ENST00000559222 APOL2Q9BQE5 337 aa18.7■□□□□ 0.58
CASC4-209ENST00000559222 APOOQ9BUR5 198 aa18.7■□□□□ 0.58
CASC4-209ENST00000559222 LGR4Q9BXB1 951 aa18.7■□□□□ 0.58
CASC4-209ENST00000559222 ABCG8Q9H221 673 aa18.7■□□□□ 0.58
CASC4-209ENST00000559222 DNAJC28Q9NX36 388 aa18.7■□□□□ 0.58
CASC4-209ENST00000559222 SHOC2Q9UQ13 582 aa18.7■□□□□ 0.58
CASC4-209ENST00000559222 SPAARA0A1B0GVQ0 90 aa18.69■□□□□ 0.58
CASC4-209ENST00000559222 LOC285095A0A1B0GVY8 99 aa18.69■□□□□ 0.58
CASC4-209ENST00000559222 CBFA2T3O75081 653 aa18.69■□□□□ 0.58
CASC4-209ENST00000559222 METTL18O95568 372 aa18.69■□□□□ 0.58
CASC4-209ENST00000559222 NDST3O95803 873 aa18.69■□□□□ 0.58
CASC4-209ENST00000559222 AGTP01019 485 aa18.69■□□□□ 0.58
CASC4-209ENST00000559222 FGGP02679 453 aa18.69■□□□□ 0.58
CASC4-209ENST00000559222 ETS1P14921 441 aa18.69■□□□□ 0.58
CASC4-209ENST00000559222 RXRGP48443 463 aa18.69■□□□□ 0.58
CASC4-209ENST00000559222 CCDC173Q0VFZ6 552 aa18.69■□□□□ 0.58
CASC4-209ENST00000559222 MTM1Q13496 603 aa18.69■□□□□ 0.58
CASC4-209ENST00000559222 TCEA2Q15560 299 aa18.69■□□□□ 0.58
CASC4-209ENST00000559222 SIRPB2Q5JXA9 342 aa18.69■□□□□ 0.58
CASC4-209ENST00000559222 ESRP1Q6NXG1 681 aaKnown RBP18.69■□□□□ 0.58
CASC4-209ENST00000559222 DBX2Q6ZNG2 339 aa18.69■□□□□ 0.58
CASC4-209ENST00000559222 DGLUCYQ7Z3D6 616 aa18.69■□□□□ 0.58
CASC4-209ENST00000559222 GLIS1Q8NBF1 620 aa18.69■□□□□ 0.58
CASC4-209ENST00000559222 SETD7Q8WTS6 366 aaKnown RBP18.69■□□□□ 0.58
CASC4-209ENST00000559222 IFT43Q96FT9 208 aa18.69■□□□□ 0.58
CASC4-209ENST00000559222 MS4A14Q96JA4 679 aa18.69■□□□□ 0.58
CASC4-209ENST00000559222 FICDQ9BVA6 458 aa18.69■□□□□ 0.58
CASC4-209ENST00000559222 PCOLCE2Q9UKZ9 415 aa18.69■□□□□ 0.58
CASC4-209ENST00000559222 ZNF711Q9Y462 761 aa18.69■□□□□ 0.58
CASC4-209ENST00000559222 COL5A1P20908 1838 aaPredicted RBP18.68■□□□□ 0.58
CASC4-209ENST00000559222 C5orf60A6NFR6 353 aa18.68■□□□□ 0.58
CASC4-209ENST00000559222 PSMD11O00231 422 aa18.68■□□□□ 0.58
CASC4-209ENST00000559222 PCDHGA12O60330 932 aa18.68■□□□□ 0.58
CASC4-209ENST00000559222 MAGEC1O60732 1142 aa18.68■□□□□ 0.58
CASC4-209ENST00000559222 SLC14A1Q13336 389 aa18.68■□□□□ 0.58
CASC4-209ENST00000559222 SPARCL1Q14515 664 aa18.68■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms