RNA–Protein interactions for RNA: ENST00000558440.5

ZEB1-211, Transcript of zinc finger E-box binding homeobox 1, humanhuman

TSL 1 (best)

Gene ZEB1, Length 886 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZEB1-211ENST00000558440 ZC3H3Q8IXZ2 948 aaKnown RBP6.21□□□□□ -1.42
ZEB1-211ENST00000558440 LSMEM2Q8N112 164 aa6.21□□□□□ -1.42
ZEB1-211ENST00000558440 TTC39CQ8N584 583 aa6.21□□□□□ -1.42
ZEB1-211ENST00000558440 DCBLD1Q8N8Z6 715 aa6.21□□□□□ -1.42
ZEB1-211ENST00000558440 OR14C36Q8NHC7 312 aa6.21□□□□□ -1.42
ZEB1-211ENST00000558440 RFFLQ8WZ73 363 aa6.21□□□□□ -1.42
ZEB1-211ENST00000558440 ZNF578Q96N58 590 aaPredicted RBP6.21□□□□□ -1.42
ZEB1-211ENST00000558440 DHRS4Q9BTZ2 278 aa6.21□□□□□ -1.42
ZEB1-211ENST00000558440 UBXN6Q9BZV1 441 aa6.21□□□□□ -1.42
ZEB1-211ENST00000558440 NEUROG2Q9H2A3 272 aa6.21□□□□□ -1.42
ZEB1-211ENST00000558440 MTG2Q9H4K7 406 aa6.21□□□□□ -1.42
ZEB1-211ENST00000558440 ZSCAN16Q9H4T2 348 aaPredicted RBP6.21□□□□□ -1.42
ZEB1-211ENST00000558440 ERVMER34-1Q9H9K5 563 aa6.21□□□□□ -1.42
ZEB1-211ENST00000558440 EBF2Q9HAK2 575 aa6.21□□□□□ -1.42
ZEB1-211ENST00000558440 UPF2Q9HAU5 1272 aaKnown RBP6.21□□□□□ -1.42
ZEB1-211ENST00000558440 CPNE5Q9HCH3 593 aa6.21□□□□□ -1.42
ZEB1-211ENST00000558440 CATSPERZQ9NTU4 200 aa6.21□□□□□ -1.42
ZEB1-211ENST00000558440 SERGEFQ9UGK8 458 aa6.21□□□□□ -1.42
ZEB1-211ENST00000558440 SFMBT1Q9UHJ3 866 aa6.21□□□□□ -1.42
ZEB1-211ENST00000558440 STOML2Q9UJZ1 356 aa6.21□□□□□ -1.42
ZEB1-211ENST00000558440 CBLCQ9ULV8 474 aa6.21□□□□□ -1.42
ZEB1-211ENST00000558440 FRMD4BQ9Y2L6 1034 aa6.21□□□□□ -1.42
ZEB1-211ENST00000558440 CEP83Q9Y592 693 aa6.21□□□□□ -1.42
ZEB1-211ENST00000558440 ATP23Q9Y6H3 246 aa6.21□□□□□ -1.42
ZEB1-211ENST00000558440 UNC13CQ8NB66 2214 aa6.21□□□□□ -1.42
ZEB1-211ENST00000558440 USP9XQ93008 2570 aaPredicted RBP6.2□□□□□ -1.42
ZEB1-211ENST00000558440 NBPF19A0A087WUL8 3843 aa6.2□□□□□ -1.42
ZEB1-211ENST00000558440 SPTBN1Q01082 2364 aaKnown RBP6.2□□□□□ -1.42
ZEB1-211ENST00000558440 TBC1D3DA0A087WVF3 549 aa6.2□□□□□ -1.42
ZEB1-211ENST00000558440 TBC1D3IA0A087WXS9 549 aa6.2□□□□□ -1.42
ZEB1-211ENST00000558440 TBC1D3EA0A087X179 549 aa6.2□□□□□ -1.42
ZEB1-211ENST00000558440 TBC1D3KA0A087X1G2 549 aa6.2□□□□□ -1.42
ZEB1-211ENST00000558440 EDDM13A0A1B0GTR0 161 aa6.2□□□□□ -1.42
ZEB1-211ENST00000558440 TARSL2A2RTX5 802 aaKnown RBP6.2□□□□□ -1.42
ZEB1-211ENST00000558440 TBC1D3FA6NER0 549 aaPredicted RBP6.2□□□□□ -1.42
ZEB1-211ENST00000558440 CYSRT1A8MQ03 144 aa6.2□□□□□ -1.42
ZEB1-211ENST00000558440 TBC1D3LB9A6J9 549 aa6.2□□□□□ -1.42
ZEB1-211ENST00000558440 POLR2DO15514 142 aaKnown RBP6.2□□□□□ -1.42
ZEB1-211ENST00000558440 IRAK2O43187 625 aa6.2□□□□□ -1.42
ZEB1-211ENST00000558440 SLC28A2O43868 658 aa6.2□□□□□ -1.42
ZEB1-211ENST00000558440 CUTAO60888 179 aa6.2□□□□□ -1.42
ZEB1-211ENST00000558440 SDC3O75056 442 aa6.2□□□□□ -1.42
ZEB1-211ENST00000558440 MOCS3O95396 460 aa6.2□□□□□ -1.42
ZEB1-211ENST00000558440 TBC1D3HP0C7X1 549 aa6.2□□□□□ -1.42
ZEB1-211ENST00000558440 C6P13671 934 aa6.2□□□□□ -1.42
ZEB1-211ENST00000558440 GOT1P17174 413 aa6.2□□□□□ -1.42
ZEB1-211ENST00000558440 CASP1P29466 404 aa6.2□□□□□ -1.42
ZEB1-211ENST00000558440 SLC8A1P32418 973 aa6.2□□□□□ -1.42
ZEB1-211ENST00000558440 CSKP41240 450 aa6.2□□□□□ -1.42
ZEB1-211ENST00000558440 GCLMP48507 274 aa6.2□□□□□ -1.42
ZEB1-211ENST00000558440 SLC11A2P49281 568 aa6.2□□□□□ -1.42
ZEB1-211ENST00000558440 SGSHP51688 502 aa6.2□□□□□ -1.42
ZEB1-211ENST00000558440 VAMP7P51809 220 aa6.2□□□□□ -1.42
ZEB1-211ENST00000558440 ADPRHP54922 357 aa6.2□□□□□ -1.42
ZEB1-211ENST00000558440 LY6DQ14210 128 aa6.2□□□□□ -1.42
ZEB1-211ENST00000558440 KCNJ12Q14500 433 aa6.2□□□□□ -1.42
ZEB1-211ENST00000558440 USP10Q14694 798 aaKnown RBP6.2□□□□□ -1.42
ZEB1-211ENST00000558440 RAB41Q5JT25 222 aa6.2□□□□□ -1.42
ZEB1-211ENST00000558440 MPP7Q5T2T1 576 aa6.2□□□□□ -1.42
ZEB1-211ENST00000558440 PIK3R6Q5UE93 754 aa6.2□□□□□ -1.42
ZEB1-211ENST00000558440 RNF219Q5W0B1 726 aaPredicted RBP6.2□□□□□ -1.42
ZEB1-211ENST00000558440 NUGGCQ68CJ6 796 aa6.2□□□□□ -1.42
ZEB1-211ENST00000558440 TBC1D3GQ6DHY5 549 aa6.2□□□□□ -1.42
ZEB1-211ENST00000558440 PM20D1Q6GTS8 502 aa6.2□□□□□ -1.42
ZEB1-211ENST00000558440 TBC1D3CQ6IPX1 549 aa6.2□□□□□ -1.42
ZEB1-211ENST00000558440 NAPEPLDQ6IQ20 393 aa6.2□□□□□ -1.42
ZEB1-211ENST00000558440 RFWD3Q6PCD5 774 aa6.2□□□□□ -1.42
ZEB1-211ENST00000558440 PRPF39Q86UA1 669 aaKnown RBP6.2□□□□□ -1.42
ZEB1-211ENST00000558440 PTRH1Q86Y79 214 aaKnown RBP6.2□□□□□ -1.42
ZEB1-211ENST00000558440 UNC45BQ8IWX7 931 aa6.2□□□□□ -1.42
ZEB1-211ENST00000558440 TBC1D3Q8IZP1 549 aaPredicted RBP6.2□□□□□ -1.42
ZEB1-211ENST00000558440 SIX6OS1Q8N1H7 587 aa6.2□□□□□ -1.42
ZEB1-211ENST00000558440 HJURPQ8NCD3 748 aaPredicted RBP6.2□□□□□ -1.42
ZEB1-211ENST00000558440 LINC00301Q8NCQ3 95 aa6.2□□□□□ -1.42
ZEB1-211ENST00000558440 WFDC5Q8TCV5 224 aa6.2□□□□□ -1.42
ZEB1-211ENST00000558440 TAS1R2Q8TE23 839 aa6.2□□□□□ -1.42
ZEB1-211ENST00000558440 KCNE4Q8WWG9 221 aa6.2□□□□□ -1.42
ZEB1-211ENST00000558440 NDRG1Q92597 394 aaKnown RBP6.2□□□□□ -1.42
ZEB1-211ENST00000558440 TTC17Q96AE7 1141 aa6.2□□□□□ -1.42
ZEB1-211ENST00000558440 WWC2-AS2Q96NR7 200 aa6.2□□□□□ -1.42
ZEB1-211ENST00000558440 DEPDC7Q96QD5 511 aa6.2□□□□□ -1.42
ZEB1-211ENST00000558440 DDX50Q9BQ39 737 aaKnown RBP6.2□□□□□ -1.42
ZEB1-211ENST00000558440 ULBP1Q9BZM6 244 aa6.2□□□□□ -1.42
ZEB1-211ENST00000558440 MMRN2Q9H8L6 949 aa6.2□□□□□ -1.42
ZEB1-211ENST00000558440 LRRC4Q9HBW1 653 aa6.2□□□□□ -1.42
ZEB1-211ENST00000558440 APOBEC3GQ9HC16 384 aaKnown RBP6.2□□□□□ -1.42
ZEB1-211ENST00000558440 EXOC1Q9NV70 894 aa6.2□□□□□ -1.42
ZEB1-211ENST00000558440 DMAC2Q9NW81 257 aa6.2□□□□□ -1.42
ZEB1-211ENST00000558440 PCDHB1Q9Y5F3 818 aa6.2□□□□□ -1.42
ZEB1-211ENST00000558440 PRRC2CQ9Y520 2896 aaKnown RBP6.2□□□□□ -1.42
ZEB1-211ENST00000558440 CENPEQ02224 2701 aa6.2□□□□□ -1.42
ZEB1-211ENST00000558440 RP1L1Q8IWN7 2480 aaPredicted RBP6.19□□□□□ -1.42
ZEB1-211ENST00000558440 TTC34A8MYJ7 566 aa6.19□□□□□ -1.42
ZEB1-211ENST00000558440 PYCARD-AS1I3L0S3 204 aa6.19□□□□□ -1.42
ZEB1-211ENST00000558440 ZNF561-AS1K7EIQ3 104 aa6.19□□□□□ -1.42
ZEB1-211ENST00000558440 PDXKO00764 312 aa6.19□□□□□ -1.42
ZEB1-211ENST00000558440 XPO1O14980 1071 aaKnown RBP6.19□□□□□ -1.42
ZEB1-211ENST00000558440 GSTA4O15217 222 aa6.19□□□□□ -1.42
ZEB1-211ENST00000558440 KLK10O43240 276 aa6.19□□□□□ -1.42
ZEB1-211ENST00000558440 MSI1O43347 362 aaKnown RBP6.19□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms