RNA–Protein interactions for RNA: ENST00000558264.5

TPM1-210, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 2,687 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-210ENST00000558264 UBFD1O14562 309 aaKnown RBP10.57□□□□□ -0.72
TPM1-210ENST00000558264 OR1I1O60431 355 aa10.57□□□□□ -0.72
TPM1-210ENST00000558264 SUPT7LO94864 414 aa10.57□□□□□ -0.72
TPM1-210ENST00000558264 CSF2RAP15509 400 aa10.57□□□□□ -0.72
TPM1-210ENST00000558264 CTPS1P17812 591 aa10.57□□□□□ -0.72
TPM1-210ENST00000558264 GKP32189 559 aa10.57□□□□□ -0.72
TPM1-210ENST00000558264 ELF1P32519 619 aa10.57□□□□□ -0.72
TPM1-210ENST00000558264 C1QTNF8P60827 252 aa10.57□□□□□ -0.72
TPM1-210ENST00000558264 NSUN2Q08J23 767 aaKnown RBP eCLIP10.57□□□□□ -0.72
TPM1-210ENST00000558264 VEPH1Q14D04 833 aa10.57□□□□□ -0.72
TPM1-210ENST00000558264 ARHGEF6Q15052 776 aa10.57□□□□□ -0.72
TPM1-210ENST00000558264 ACAD11Q709F0 780 aa10.57□□□□□ -0.72
TPM1-210ENST00000558264 ISCA2Q86U28 154 aa10.57□□□□□ -0.72
TPM1-210ENST00000558264 RNF148Q8N7C7 305 aa10.57□□□□□ -0.72
TPM1-210ENST00000558264 PYDC1Q8WXC3 89 aa10.57□□□□□ -0.72
TPM1-210ENST00000558264 PLD4Q96BZ4 506 aa10.57□□□□□ -0.72
TPM1-210ENST00000558264 TSPAN17Q96FV3 270 aa10.57□□□□□ -0.72
TPM1-210ENST00000558264 UBXN10Q96LJ8 280 aa10.57□□□□□ -0.72
TPM1-210ENST00000558264 ZNF558Q96NG5 402 aa10.57□□□□□ -0.72
TPM1-210ENST00000558264 CDK5RAP1Q96SZ6 601 aaKnown RBP10.57□□□□□ -0.72
TPM1-210ENST00000558264 TDRD1Q9BXT4 1180 aaKnown RBP10.57□□□□□ -0.72
TPM1-210ENST00000558264 SMG9Q9H0W8 520 aaKnown RBP10.57□□□□□ -0.72
TPM1-210ENST00000558264 POLR3BQ9NW08 1133 aaPredicted RBP10.57□□□□□ -0.72
TPM1-210ENST00000558264 VPS28Q9UK41 221 aa10.57□□□□□ -0.72
TPM1-210ENST00000558264 PTGDR2Q9Y5Y4 395 aa10.57□□□□□ -0.72
TPM1-210ENST00000558264 UBXN8O00124 270 aa10.56□□□□□ -0.72
TPM1-210ENST00000558264 CFLARO15519 480 aa10.56□□□□□ -0.72
TPM1-210ENST00000558264 PRAMEF12O95522 483 aa10.56□□□□□ -0.72
TPM1-210ENST00000558264 CD160O95971 181 aa10.56□□□□□ -0.72
TPM1-210ENST00000558264 ATP5BP06576 529 aaKnown RBP10.56□□□□□ -0.72
TPM1-210ENST00000558264 POLD2P49005 469 aa10.56□□□□□ -0.72
TPM1-210ENST00000558264 VASPP50552 380 aaPredicted RBP10.56□□□□□ -0.72
TPM1-210ENST00000558264 TNK2Q07912 1038 aa10.56□□□□□ -0.72
TPM1-210ENST00000558264 TBL3Q12788 808 aaKnown RBP10.56□□□□□ -0.72
TPM1-210ENST00000558264 TRAF2Q12933 501 aa10.56□□□□□ -0.72
TPM1-210ENST00000558264 OR4D1Q15615 310 aa10.56□□□□□ -0.72
TPM1-210ENST00000558264 C5orf22Q49AR2 442 aa10.56□□□□□ -0.72
TPM1-210ENST00000558264 MRNIPQ6NTE8 343 aa10.56□□□□□ -0.72
TPM1-210ENST00000558264 ANKRD33Q7Z3H0 272 aa10.56□□□□□ -0.72
TPM1-210ENST00000558264 CUZD1Q86UP6 607 aa10.56□□□□□ -0.72
TPM1-210ENST00000558264 PIANPQ8IYJ0 282 aa10.56□□□□□ -0.72
TPM1-210ENST00000558264 SLC39A11Q8N1S5 342 aa10.56□□□□□ -0.72
TPM1-210ENST00000558264 SCG3Q8WXD2 468 aaKnown RBP10.56□□□□□ -0.72
TPM1-210ENST00000558264 ZFRQ96KR1 1074 aaKnown RBP10.56□□□□□ -0.72
TPM1-210ENST00000558264 NMRK1Q9NWW6 199 aa10.56□□□□□ -0.72
TPM1-210ENST00000558264 FKBPLQ9UIM3 349 aa10.56□□□□□ -0.72
TPM1-210ENST00000558264 IKZF3Q9UKT9 509 aa10.56□□□□□ -0.72
TPM1-210ENST00000558264 PPM1HQ9ULR3 514 aa10.56□□□□□ -0.72
TPM1-210ENST00000558264 CPQQ9Y646 472 aa10.56□□□□□ -0.72
TPM1-210ENST00000558264 CCDC189A1A4V9 331 aa10.56□□□□□ -0.72
TPM1-210ENST00000558264 ILVBLA1L0T0 632 aa10.56□□□□□ -0.72
TPM1-210ENST00000558264 NCF1BA6NI72 391 aaPredicted RBP10.56□□□□□ -0.72
TPM1-210ENST00000558264 NCF1CA8MVU1 366 aaPredicted RBP10.56□□□□□ -0.72
TPM1-210ENST00000558264 A8MX80 341 aa10.56□□□□□ -0.72
TPM1-210ENST00000558264 URODP06132 367 aa10.56□□□□□ -0.72
TPM1-210ENST00000558264 MYL4P12829 197 aa10.56□□□□□ -0.72
TPM1-210ENST00000558264 NCF1P14598 390 aaPredicted RBP10.56□□□□□ -0.72
TPM1-210ENST00000558264 CSKP41240 450 aa10.56□□□□□ -0.72
TPM1-210ENST00000558264 KPNA2P52292 529 aaKnown RBP10.56□□□□□ -0.72
TPM1-210ENST00000558264 ZNF140P52738 457 aaPredicted RBP10.56□□□□□ -0.72
TPM1-210ENST00000558264 STC1P52823 247 aa10.56□□□□□ -0.72
TPM1-210ENST00000558264 PRKAA2P54646 552 aa10.56□□□□□ -0.72
TPM1-210ENST00000558264 SEMG2Q02383 582 aa10.56□□□□□ -0.72
TPM1-210ENST00000558264 DSG1Q02413 1049 aa10.56□□□□□ -0.72
TPM1-210ENST00000558264 BTKQ06187 659 aa10.56□□□□□ -0.72
TPM1-210ENST00000558264 PDAP1Q13442 181 aaKnown RBP10.56□□□□□ -0.72
TPM1-210ENST00000558264 MUM1Q2TAK8 710 aa10.56□□□□□ -0.72
TPM1-210ENST00000558264 FAM45BPQ6NSW5 357 aa10.56□□□□□ -0.72
TPM1-210ENST00000558264 PSAPL1Q6NUJ1 521 aa10.56□□□□□ -0.72
TPM1-210ENST00000558264 TPGS1Q6ZTW0 290 aa10.56□□□□□ -0.72
TPM1-210ENST00000558264 PIWIL4Q7Z3Z4 852 aaKnown RBP10.56□□□□□ -0.72
TPM1-210ENST00000558264 GABPB2Q8TAK5 448 aaPredicted RBP10.56□□□□□ -0.72
TPM1-210ENST00000558264 FAM45AQ8TCE6 357 aa10.56□□□□□ -0.72
TPM1-210ENST00000558264 USP13Q92995 863 aaPredicted RBP10.56□□□□□ -0.72
TPM1-210ENST00000558264 RCN3Q96D15 328 aa10.56□□□□□ -0.72
TPM1-210ENST00000558264 CCDC97Q96F63 343 aaPredicted RBP10.56□□□□□ -0.72
TPM1-210ENST00000558264 RSRC1Q96IZ7 334 aaKnown RBP10.56□□□□□ -0.72
TPM1-210ENST00000558264 ZNF599Q96NL3 588 aa10.56□□□□□ -0.72
TPM1-210ENST00000558264 NSUN5Q96P11 429 aaKnown RBP10.56□□□□□ -0.72
TPM1-210ENST00000558264 SLC30A3Q99726 388 aa10.56□□□□□ -0.72
TPM1-210ENST00000558264 GIMAP2Q9UG22 337 aa10.56□□□□□ -0.72
TPM1-210ENST00000558264 CDH22Q9UJ99 828 aa10.56□□□□□ -0.72
TPM1-210ENST00000558264 INSL5Q9Y5Q6 135 aa10.56□□□□□ -0.72
TPM1-210ENST00000558264 COL4A6Q14031 1691 aa10.55□□□□□ -0.72
TPM1-210ENST00000558264 TANC1Q9C0D5 1861 aa10.55□□□□□ -0.72
TPM1-210ENST00000558264 STX16-NPEPL1H3BU86 382 aa10.55□□□□□ -0.72
TPM1-210ENST00000558264 SDHDO14521 159 aa10.55□□□□□ -0.72
TPM1-210ENST00000558264 TEX28O15482 410 aa10.55□□□□□ -0.72
TPM1-210ENST00000558264 RHOBTB1O94844 696 aa10.55□□□□□ -0.72
TPM1-210ENST00000558264 ALPIP09923 528 aa10.55□□□□□ -0.72
TPM1-210ENST00000558264 CR2P20023 1033 aa10.55□□□□□ -0.72
TPM1-210ENST00000558264 FDXRP22570 491 aa10.55□□□□□ -0.72
TPM1-210ENST00000558264 ACTR3P61158 418 aa10.55□□□□□ -0.72
TPM1-210ENST00000558264 ACVR1Q04771 509 aa10.55□□□□□ -0.72
TPM1-210ENST00000558264 ACAP2Q15057 778 aa10.55□□□□□ -0.72
TPM1-210ENST00000558264 PFKFB4Q16877 469 aa10.55□□□□□ -0.72
TPM1-210ENST00000558264 LRRC36Q1X8D7 754 aa10.55□□□□□ -0.72
TPM1-210ENST00000558264 C6orf163Q5TEZ5 329 aa10.55□□□□□ -0.72
TPM1-210ENST00000558264 CNKSR3Q6P9H4 555 aa10.55□□□□□ -0.72
TPM1-210ENST00000558264 PAQR3Q6TCH7 311 aa10.55□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 55.1 ms