RNA–Protein interactions for RNA: ENST00000556479.5

LINC00640-203, long intergenic non-protein coding RNA 640, humanhuman

TSL 2 BASIC

Gene LINC00640, Length 576 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00640-203ENST00000556479 CAPN7Q9Y6W3 813 aa3.94□□□□□ -1.78
LINC00640-203ENST00000556479 MAGI3Q5TCQ9 1506 aa3.94□□□□□ -1.78
LINC00640-203ENST00000556479 CCDC144AA2RUR9 1427 aa3.94□□□□□ -1.78
LINC00640-203ENST00000556479 UTYO14607 1347 aa3.94□□□□□ -1.78
LINC00640-203ENST00000556479 ADGBQ8N7X0 1667 aa3.94□□□□□ -1.78
LINC00640-203ENST00000556479 CKAP5Q14008 2032 aa3.94□□□□□ -1.78
LINC00640-203ENST00000556479 NKTRP30414 1462 aaKnown RBP3.93□□□□□ -1.78
LINC00640-203ENST00000556479 FANCD2Q9BXW9 1451 aa3.93□□□□□ -1.78
LINC00640-203ENST00000556479 NESP48681 1621 aa3.93□□□□□ -1.78
LINC00640-203ENST00000556479 A0A0U1RQJ8 604 aa3.93□□□□□ -1.78
LINC00640-203ENST00000556479 USP17L23D6RBM5 183 aa3.93□□□□□ -1.78
LINC00640-203ENST00000556479 GTPBP1O00178 669 aaKnown RBP3.93□□□□□ -1.78
LINC00640-203ENST00000556479 DYNC1I1O14576 645 aa3.93□□□□□ -1.78
LINC00640-203ENST00000556479 BCAT2O15382 392 aaPredicted RBP3.93□□□□□ -1.78
LINC00640-203ENST00000556479 KCNJ13O60928 360 aa3.93□□□□□ -1.78
LINC00640-203ENST00000556479 SERPINI2O75830 405 aa3.93□□□□□ -1.78
LINC00640-203ENST00000556479 PRSS2P07478 247 aa3.93□□□□□ -1.78
LINC00640-203ENST00000556479 HOXB5P09067 269 aa3.93□□□□□ -1.78
LINC00640-203ENST00000556479 GPTP24298 496 aa3.93□□□□□ -1.78
LINC00640-203ENST00000556479 C21orf33P30042 268 aaPredicted RBP3.93□□□□□ -1.78
LINC00640-203ENST00000556479 HNRNPH1P31943 449 aaKnown RBP3.93□□□□□ -1.78
LINC00640-203ENST00000556479 CDAP32320 146 aa3.93□□□□□ -1.78
LINC00640-203ENST00000556479 KRT9P35527 623 aa3.93□□□□□ -1.78
LINC00640-203ENST00000556479 PDLIM4P50479 330 aa3.93□□□□□ -1.78
LINC00640-203ENST00000556479 DSCR9P59020 149 aa3.93□□□□□ -1.78
LINC00640-203ENST00000556479 NEXNQ0ZGT2 675 aa3.93□□□□□ -1.78
LINC00640-203ENST00000556479 EFNB3Q15768 340 aa3.93□□□□□ -1.78
LINC00640-203ENST00000556479 TSTQ16762 297 aaKnown RBP3.93□□□□□ -1.78
LINC00640-203ENST00000556479 ALG11Q2TAA5 492 aa3.93□□□□□ -1.78
LINC00640-203ENST00000556479 EFHC1Q5JVL4 640 aa3.93□□□□□ -1.78
LINC00640-203ENST00000556479 TYW3Q6IPR3 259 aaKnown RBP3.93□□□□□ -1.78
LINC00640-203ENST00000556479 PLEKHA7Q6IQ23 1121 aa3.93□□□□□ -1.78
LINC00640-203ENST00000556479 CDC73Q6P1J9 531 aa3.93□□□□□ -1.78
LINC00640-203ENST00000556479 DIS3L2Q8IYB7 885 aaKnown RBP3.93□□□□□ -1.78
LINC00640-203ENST00000556479 BEST2Q8NFU1 509 aa3.93□□□□□ -1.78
LINC00640-203ENST00000556479 METTL6Q8TCB7 284 aa3.93□□□□□ -1.78
LINC00640-203ENST00000556479 SNX21Q969T3 373 aa3.93□□□□□ -1.78
LINC00640-203ENST00000556479 THOC3Q96J01 351 aaKnown RBP3.93□□□□□ -1.78
LINC00640-203ENST00000556479 TXNDC15Q96J42 360 aa3.93□□□□□ -1.78
LINC00640-203ENST00000556479 MPP4Q96JB8 637 aa3.93□□□□□ -1.78
LINC00640-203ENST00000556479 SLITRK1Q96PX8 696 aa3.93□□□□□ -1.78
LINC00640-203ENST00000556479 KCNN2Q9H2S1 579 aa3.93□□□□□ -1.78
LINC00640-203ENST00000556479 BPIFA1Q9NP55 256 aa3.93□□□□□ -1.78
LINC00640-203ENST00000556479 ERBINQ96RT1 1412 aa3.93□□□□□ -1.78
LINC00640-203ENST00000556479 GAPVD1Q14C86 1478 aa3.92□□□□□ -1.78
LINC00640-203ENST00000556479 PLEKHH1Q9ULM0 1364 aa3.92□□□□□ -1.78
LINC00640-203ENST00000556479 TOPBP1Q92547 1522 aa3.92□□□□□ -1.78
LINC00640-203ENST00000556479 A0A0U1RQG5 324 aaPredicted RBP3.92□□□□□ -1.78
LINC00640-203ENST00000556479 LINC01553A4QN01 128 aa3.92□□□□□ -1.78
LINC00640-203ENST00000556479 LRRC53A6NM62 1247 aa3.92□□□□□ -1.78
LINC00640-203ENST00000556479 SRRM3A6NNA2 597 aaPredicted RBP3.92□□□□□ -1.78
LINC00640-203ENST00000556479 LACTBL1A8MY62 500 aa3.92□□□□□ -1.78
LINC00640-203ENST00000556479 PROB1E7EW31 1015 aa3.92□□□□□ -1.78
LINC00640-203ENST00000556479 EPB41L2O43491 1005 aaKnown RBP3.92□□□□□ -1.78
LINC00640-203ENST00000556479 RTN3O95197 1032 aaPredicted RBP3.92□□□□□ -1.78
LINC00640-203ENST00000556479 CH25HO95992 272 aa3.92□□□□□ -1.78
LINC00640-203ENST00000556479 FCGR1AP12314 374 aa3.92□□□□□ -1.78
LINC00640-203ENST00000556479 CD58P19256 250 aa3.92□□□□□ -1.78
LINC00640-203ENST00000556479 DDIT3P35638 169 aa3.92□□□□□ -1.78
LINC00640-203ENST00000556479 CTCFP49711 727 aaPredicted RBP3.92□□□□□ -1.78
LINC00640-203ENST00000556479 CCR9P51686 369 aa3.92□□□□□ -1.78
LINC00640-203ENST00000556479 SEC61A1P61619 476 aaKnown RBP3.92□□□□□ -1.78
LINC00640-203ENST00000556479 KIF5AQ12840 1032 aa3.92□□□□□ -1.78
LINC00640-203ENST00000556479 KEAP1Q14145 624 aa3.92□□□□□ -1.78
LINC00640-203ENST00000556479 FGFBP1Q14512 234 aa3.92□□□□□ -1.78
LINC00640-203ENST00000556479 NFATC4Q14934 902 aa3.92□□□□□ -1.78
LINC00640-203ENST00000556479 PLCB4Q15147 1175 aa3.92□□□□□ -1.78
LINC00640-203ENST00000556479 HIST2H2BCQ6DN03 193 aa3.92□□□□□ -1.78
LINC00640-203ENST00000556479 HIST2H2BDQ6DRA6 164 aa3.92□□□□□ -1.78
LINC00640-203ENST00000556479 KLHL24Q6TFL4 600 aa3.92□□□□□ -1.78
LINC00640-203ENST00000556479 SASS6Q6UVJ0 657 aa3.92□□□□□ -1.78
LINC00640-203ENST00000556479 ATF7IPQ6VMQ6 1270 aa3.92□□□□□ -1.78
LINC00640-203ENST00000556479 FJX1Q86VR8 437 aa3.92□□□□□ -1.78
LINC00640-203ENST00000556479 ZC3HC1Q86WB0 502 aaKnown RBP3.92□□□□□ -1.78
LINC00640-203ENST00000556479 CNTROBQ8N137 903 aa3.92□□□□□ -1.78
LINC00640-203ENST00000556479 SCCPDHQ8NBX0 429 aa3.92□□□□□ -1.78
LINC00640-203ENST00000556479 ZNF114Q8NC26 417 aa3.92□□□□□ -1.78
LINC00640-203ENST00000556479 AGBL3Q8NEM8 1001 aa3.92□□□□□ -1.78
LINC00640-203ENST00000556479 NUDCD2Q8WVJ2 157 aa3.92□□□□□ -1.78
LINC00640-203ENST00000556479 PSPC1Q8WXF1 523 aaKnown RBP3.92□□□□□ -1.78
LINC00640-203ENST00000556479 SLC41A2Q96JW4 573 aa3.92□□□□□ -1.78
LINC00640-203ENST00000556479 C7orf26Q96N11 449 aa3.92□□□□□ -1.78
LINC00640-203ENST00000556479 ZNF570Q96NI8 536 aa3.92□□□□□ -1.78
LINC00640-203ENST00000556479 PIP5K1AQ99755 562 aa3.92□□□□□ -1.78
LINC00640-203ENST00000556479 CD93Q9NPY3 652 aa3.92□□□□□ -1.78
LINC00640-203ENST00000556479 PRDM4Q9UKN5 801 aa3.92□□□□□ -1.78
LINC00640-203ENST00000556479 STON1Q9Y6Q2 735 aa3.92□□□□□ -1.78
LINC00640-203ENST00000556479 DDX49Q9Y6V7 483 aaKnown RBP3.92□□□□□ -1.78
LINC00640-203ENST00000556479 POLA1P09884 1462 aaPredicted RBP3.92□□□□□ -1.78
LINC00640-203ENST00000556479 CAMSAP2Q08AD1 1489 aa3.92□□□□□ -1.78
LINC00640-203ENST00000556479 TDRD9Q8NDG6 1382 aaKnown RBP3.91□□□□□ -1.78
LINC00640-203ENST00000556479 CLASP1Q7Z460 1538 aa3.91□□□□□ -1.78
LINC00640-203ENST00000556479 UQCRHLA0A096LP55 91 aa3.91□□□□□ -1.78
LINC00640-203ENST00000556479 TMEM202A6NGA9 273 aa3.91□□□□□ -1.78
LINC00640-203ENST00000556479 C4orf47A7E2U8 309 aa3.91□□□□□ -1.78
LINC00640-203ENST00000556479 ZNF500O60304 480 aaPredicted RBP3.91□□□□□ -1.78
LINC00640-203ENST00000556479 ZIC3O60481 467 aa3.91□□□□□ -1.78
LINC00640-203ENST00000556479 SEC14L2O76054 403 aa3.91□□□□□ -1.78
LINC00640-203ENST00000556479 MBD4O95243 580 aa3.91□□□□□ -1.78
LINC00640-203ENST00000556479 PPP1R3DO95685 299 aa3.91□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms