RNA–Protein interactions for RNA: ENST00000556422.5

TMEM260-210, Transcript of transmembrane protein 260, humanhuman

TSL 1 (best)

Gene TMEM260, Length 3,864 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-210ENST00000556422 SMG5Q9UPR3 1016 aaKnown RBP5.12□□□□□ -1.59
TMEM260-210ENST00000556422 CAB39Q9Y376 341 aaPredicted RBP5.12□□□□□ -1.59
TMEM260-210ENST00000556422 HBS1LQ9Y450 684 aaKnown RBP5.12□□□□□ -1.59
TMEM260-210ENST00000556422 USP15Q9Y4E8 981 aaPredicted RBP5.12□□□□□ -1.59
TMEM260-210ENST00000556422 PCDHGA1Q9Y5H4 931 aa5.12□□□□□ -1.59
TMEM260-210ENST00000556422 SF3B1O75533 1304 aaKnown RBP eCLIP5.12□□□□□ -1.595e-6■■■■■ 189.5
TMEM260-210ENST00000556422 A0A0U1RQF3 1178 aa5.12□□□□□ -1.59
TMEM260-210ENST00000556422 H3BRJ5 948 aa5.12□□□□□ -1.59
TMEM260-210ENST00000556422 M0QZ92 97 aa5.12□□□□□ -1.59
TMEM260-210ENST00000556422 FPGTO14772 594 aa5.12□□□□□ -1.59
TMEM260-210ENST00000556422 PLOD3O60568 738 aa5.12□□□□□ -1.59
TMEM260-210ENST00000556422 UGT1A9O60656 530 aa5.12□□□□□ -1.59
TMEM260-210ENST00000556422 POMCP01189 267 aa5.12□□□□□ -1.59
TMEM260-210ENST00000556422 USP17L7P0C7H9 530 aa5.12□□□□□ -1.59
TMEM260-210ENST00000556422 ITGALP20701 1170 aa5.12□□□□□ -1.59
TMEM260-210ENST00000556422 CCNFP41002 786 aa5.12□□□□□ -1.59
TMEM260-210ENST00000556422 ABCG1P45844 678 aa5.12□□□□□ -1.59
TMEM260-210ENST00000556422 BRCC3P46736 316 aa5.12□□□□□ -1.59
TMEM260-210ENST00000556422 LHX1P48742 406 aa5.12□□□□□ -1.59
TMEM260-210ENST00000556422 EEF1A1P68104 462 aaKnown RBP5.12□□□□□ -1.59
TMEM260-210ENST00000556422 EEF1A2Q05639 463 aaKnown RBP5.12□□□□□ -1.59
TMEM260-210ENST00000556422 LGALS3BPQ08380 585 aa5.12□□□□□ -1.59
TMEM260-210ENST00000556422 SCAPQ12770 1279 aa5.12□□□□□ -1.59
TMEM260-210ENST00000556422 NME3Q13232 169 aa5.12□□□□□ -1.59
TMEM260-210ENST00000556422 EIF4EBP2Q13542 120 aaPredicted RBP5.12□□□□□ -1.59
TMEM260-210ENST00000556422 RAPSNQ13702 412 aa5.12□□□□□ -1.59
TMEM260-210ENST00000556422 KCNA10Q16322 511 aa5.12□□□□□ -1.59
TMEM260-210ENST00000556422 GALNTL6Q49A17 601 aa5.12□□□□□ -1.59
TMEM260-210ENST00000556422 EEF1A1P5Q5VTE0 462 aa5.12□□□□□ -1.59
TMEM260-210ENST00000556422 FAM171BQ6P995 826 aa5.12□□□□□ -1.59
TMEM260-210ENST00000556422 UNC5AQ6ZN44 842 aa5.12□□□□□ -1.59
TMEM260-210ENST00000556422 OTOP3Q7RTS5 596 aa5.12□□□□□ -1.59
TMEM260-210ENST00000556422 ELMOD2Q8IZ81 293 aa5.12□□□□□ -1.59
TMEM260-210ENST00000556422 FITM2Q8N6M3 262 aa5.12□□□□□ -1.59
TMEM260-210ENST00000556422 NPWQ8N729 165 aa5.12□□□□□ -1.59
TMEM260-210ENST00000556422 TTLQ8NG68 377 aa5.12□□□□□ -1.59
TMEM260-210ENST00000556422 OR10T2Q8NGX3 314 aa5.12□□□□□ -1.59
TMEM260-210ENST00000556422 ENKURQ8TC29 256 aa5.12□□□□□ -1.59
TMEM260-210ENST00000556422 TCP10LQ8TDR4 215 aa5.12□□□□□ -1.59
TMEM260-210ENST00000556422 POF1BQ8WVV4 589 aa5.12□□□□□ -1.59
TMEM260-210ENST00000556422 HTR3CQ8WXA8 447 aa5.12□□□□□ -1.59
TMEM260-210ENST00000556422 PTPRN2Q92932 1015 aa5.12□□□□□ -1.59
TMEM260-210ENST00000556422 PHF21AQ96BD5 680 aa5.12□□□□□ -1.59
TMEM260-210ENST00000556422 PGAP3Q96FM1 320 aaPredicted RBP5.12□□□□□ -1.59
TMEM260-210ENST00000556422 OXNAD1Q96HP4 312 aaPredicted RBP5.12□□□□□ -1.59
TMEM260-210ENST00000556422 TMEM209Q96SK2 561 aa5.12□□□□□ -1.59
TMEM260-210ENST00000556422 CYTH2Q99418 400 aa5.12□□□□□ -1.59
TMEM260-210ENST00000556422 CENPKQ9BS16 269 aa5.12□□□□□ -1.59
TMEM260-210ENST00000556422 CEP41Q9BYV8 373 aa5.12□□□□□ -1.59
TMEM260-210ENST00000556422 UGT1A7Q9HAW7 530 aa5.12□□□□□ -1.59
TMEM260-210ENST00000556422 UGT1A10Q9HAW8 530 aa5.12□□□□□ -1.59
TMEM260-210ENST00000556422 UGT1A8Q9HAW9 530 aa5.12□□□□□ -1.59
TMEM260-210ENST00000556422 TRMT13Q9NUP7 481 aaKnown RBP5.12□□□□□ -1.59
TMEM260-210ENST00000556422 NKIRAS1Q9NYS0 192 aa5.12□□□□□ -1.59
TMEM260-210ENST00000556422 COX16Q9P0S2 106 aa5.12□□□□□ -1.59
TMEM260-210ENST00000556422 IFT80Q9P2H3 777 aaPredicted RBP5.12□□□□□ -1.59
TMEM260-210ENST00000556422 TXNDC16Q9P2K2 825 aa5.12□□□□□ -1.59
TMEM260-210ENST00000556422 SLC17A7Q9P2U7 560 aa5.12□□□□□ -1.59
TMEM260-210ENST00000556422 NEU3Q9UQ49 428 aa5.12□□□□□ -1.59
TMEM260-210ENST00000556422 A0A0A0MRY4 1105 aa5.11□□□□□ -1.59
TMEM260-210ENST00000556422 SLC9B1P1A6NJY1 282 aa5.11□□□□□ -1.59
TMEM260-210ENST00000556422 TMEM114B3SHH9 223 aa5.11□□□□□ -1.59
TMEM260-210ENST00000556422 TXNL1O43396 289 aa5.11□□□□□ -1.59
TMEM260-210ENST00000556422 CLPTM1O96005 669 aa5.11□□□□□ -1.59
TMEM260-210ENST00000556422 DHRS4L1P0CG22 281 aa5.11□□□□□ -1.59
TMEM260-210ENST00000556422 CSH1P0DML2 217 aa5.11□□□□□ -1.59
TMEM260-210ENST00000556422 CSH2P0DML3 217 aa5.11□□□□□ -1.59
TMEM260-210ENST00000556422 PMLP29590 882 aa5.11□□□□□ -1.59
TMEM260-210ENST00000556422 PDHA2P29803 388 aa5.11□□□□□ -1.59
TMEM260-210ENST00000556422 THPOP40225 353 aa5.11□□□□□ -1.59
TMEM260-210ENST00000556422 EPHB1P54762 984 aa5.11□□□□□ -1.59
TMEM260-210ENST00000556422 FAAP100Q0VG06 881 aa5.11□□□□□ -1.59
TMEM260-210ENST00000556422 SREBF2Q12772 1141 aa5.11□□□□□ -1.59
TMEM260-210ENST00000556422 PRKG2Q13237 762 aa5.11□□□□□ -1.59
TMEM260-210ENST00000556422 FRG1Q14331 258 aaKnown RBP5.11□□□□□ -1.59
TMEM260-210ENST00000556422 PAFAH1B3Q15102 231 aaKnown RBP5.11□□□□□ -1.59
TMEM260-210ENST00000556422 USP39Q53GS9 565 aaKnown RBP5.11□□□□□ -1.59
TMEM260-210ENST00000556422 RTP2Q5QGT7 225 aa5.11□□□□□ -1.59
TMEM260-210ENST00000556422 TMEM164Q5U3C3 297 aa5.11□□□□□ -1.59
TMEM260-210ENST00000556422 HEATR6Q6AI08 1181 aaKnown RBP5.11□□□□□ -1.59
TMEM260-210ENST00000556422 CDHR3Q6ZTQ4 885 aa5.11□□□□□ -1.59
TMEM260-210ENST00000556422 CCDC149Q6ZUS6 474 aa5.11□□□□□ -1.59
TMEM260-210ENST00000556422 DENND5BQ6ZUT9 1274 aa5.11□□□□□ -1.59
TMEM260-210ENST00000556422 NUP54Q7Z3B4 507 aa5.11□□□□□ -1.59
TMEM260-210ENST00000556422 TMC7Q7Z402 723 aa5.11□□□□□ -1.59
TMEM260-210ENST00000556422 TICAM1Q8IUC6 712 aa5.11□□□□□ -1.59
TMEM260-210ENST00000556422 CEP97Q8IW35 865 aa5.11□□□□□ -1.59
TMEM260-210ENST00000556422 SIX6OS1Q8N1H7 587 aa5.11□□□□□ -1.59
TMEM260-210ENST00000556422 CBARPQ8N350 705 aaPredicted RBP5.11□□□□□ -1.59
TMEM260-210ENST00000556422 HASPINQ8TF76 798 aa5.11□□□□□ -1.59
TMEM260-210ENST00000556422 ARNTL2Q8WYA1 636 aa5.11□□□□□ -1.59
TMEM260-210ENST00000556422 MYLPFQ96A32 169 aa5.11□□□□□ -1.59
TMEM260-210ENST00000556422 SLC47A1Q96FL8 570 aa5.11□□□□□ -1.59
TMEM260-210ENST00000556422 P2RY11Q96G91 374 aa5.11□□□□□ -1.59
TMEM260-210ENST00000556422 SPATA13Q96N96 652 aa5.11□□□□□ -1.59
TMEM260-210ENST00000556422 ZNF570Q96NI8 536 aa5.11□□□□□ -1.59
TMEM260-210ENST00000556422 MENTQ9BUN1 341 aa5.11□□□□□ -1.59
TMEM260-210ENST00000556422 FAM192AQ9GZU8 254 aa5.11□□□□□ -1.59
TMEM260-210ENST00000556422 LRRC4Q9HBW1 653 aa5.11□□□□□ -1.59
TMEM260-210ENST00000556422 XPNPEP3Q9NQH7 507 aa5.11□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms