RNA–Protein interactions for RNA: ENST00000556399.5

ARHGEF40-207, Transcript of Rho guanine nucleotide exchange factor 40, humanhuman

TSL 1 (best)

Gene ARHGEF40, Length 4,902 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF40-207ENST00000556399 MTMR14Q8NCE2 650 aa15.04■□□□□ -0
ARHGEF40-207ENST00000556399 OR4L1Q8NH43 312 aa15.04■□□□□ -0
ARHGEF40-207ENST00000556399 CANT1Q8WVQ1 401 aa15.04■□□□□ -0
ARHGEF40-207ENST00000556399 MTFMTQ96DP5 389 aaKnown RBP15.04■□□□□ -0
ARHGEF40-207ENST00000556399 UBA2Q9UBT2 640 aaPredicted RBP15.04■□□□□ -0
ARHGEF40-207ENST00000556399 AP3M1Q9Y2T2 418 aa15.04■□□□□ -0
ARHGEF40-207ENST00000556399 GMPPBQ9Y5P6 360 aa15.04■□□□□ -0
ARHGEF40-207ENST00000556399 DGKBQ9Y6T7 804 aa15.04■□□□□ -0
ARHGEF40-207ENST00000556399 KLRG2A4D1S0 409 aaPredicted RBP15.04■□□□□ -0
ARHGEF40-207ENST00000556399 FFAR3O14843 346 aa15.04■□□□□ -0
ARHGEF40-207ENST00000556399 GPR42O15529 346 aa15.04■□□□□ -0
ARHGEF40-207ENST00000556399 IL1BP01584 269 aa15.04■□□□□ -0
ARHGEF40-207ENST00000556399 CCNCP24863 283 aa15.04■□□□□ -0
ARHGEF40-207ENST00000556399 ARMC4Q5T2S8 1044 aa15.04■□□□□ -0
ARHGEF40-207ENST00000556399 CRTC3Q6UUV7 619 aa15.04■□□□□ -0
ARHGEF40-207ENST00000556399 SPATA19Q7Z5L4 167 aa15.04■□□□□ -0
ARHGEF40-207ENST00000556399 THAP5Q7Z6K1 395 aa15.04■□□□□ -0
ARHGEF40-207ENST00000556399 CARNMT1Q8N4J0 409 aa15.04■□□□□ -0
ARHGEF40-207ENST00000556399 ZNF540Q8NDQ6 660 aa15.04■□□□□ -0
ARHGEF40-207ENST00000556399 PIWIL1Q96J94 861 aaKnown RBP15.04■□□□□ -0
ARHGEF40-207ENST00000556399 ZBTB26Q9HCK0 441 aa15.04■□□□□ -0
ARHGEF40-207ENST00000556399 CAB39Q9Y376 341 aaPredicted RBP15.04■□□□□ -0
ARHGEF40-207ENST00000556399 CCL22O00626 93 aa15.04■□□□□ -0
ARHGEF40-207ENST00000556399 DLX3O60479 287 aa15.04■□□□□ -0
ARHGEF40-207ENST00000556399 NADKO95544 446 aaPredicted RBP15.04■□□□□ -0
ARHGEF40-207ENST00000556399 NCK1P16333 377 aa15.04■□□□□ -0
ARHGEF40-207ENST00000556399 SPANXN2Q5MJ10 180 aa15.04■□□□□ -0
ARHGEF40-207ENST00000556399 ZNF549Q6P9A3 640 aa15.04■□□□□ -0
ARHGEF40-207ENST00000556399 SAPCD2Q86UD0 394 aa15.04■□□□□ -0
ARHGEF40-207ENST00000556399 TRIM74Q86UV6 250 aa15.04■□□□□ -0
ARHGEF40-207ENST00000556399 TRIM73Q86UV7 250 aa15.04■□□□□ -0
ARHGEF40-207ENST00000556399 HNRNPABQ99729 332 aaKnown RBP15.04■□□□□ -0
ARHGEF40-207ENST00000556399 XYLT2Q9H1B5 865 aa15.04■□□□□ -0
ARHGEF40-207ENST00000556399 LIN28AQ9H9Z2 209 aaKnown RBP15.04■□□□□ -0
ARHGEF40-207ENST00000556399 KCNK13Q9HB14 408 aa15.04■□□□□ -0
ARHGEF40-207ENST00000556399 DUSP12Q9UNI6 340 aa15.04■□□□□ -0
ARHGEF40-207ENST00000556399 PCDHB5Q9Y5E4 795 aa15.04■□□□□ -0
ARHGEF40-207ENST00000556399 SYNDIG1LA6NDD5 238 aa15.03■□□□□ -0
ARHGEF40-207ENST00000556399 MATN2O00339 956 aa15.03■□□□□ -0
ARHGEF40-207ENST00000556399 MFN2O95140 757 aa15.03■□□□□ -0
ARHGEF40-207ENST00000556399 YWHAQP27348 245 aa15.03■□□□□ -0
ARHGEF40-207ENST00000556399 TXNDC11Q6PKC3 985 aa15.03■□□□□ -0
ARHGEF40-207ENST00000556399 SLCO6A1Q86UG4 719 aa15.03■□□□□ -0
ARHGEF40-207ENST00000556399 LEMD2Q8NC56 503 aa15.03■□□□□ -0
ARHGEF40-207ENST00000556399 PCDHB8Q9UN66 801 aa15.03■□□□□ -0
ARHGEF40-207ENST00000556399 PDHXO00330 501 aa15.03■□□□□ -0
ARHGEF40-207ENST00000556399 MSI1O43347 362 aaKnown RBP15.03■□□□□ -0
ARHGEF40-207ENST00000556399 CAPGP40121 348 aa15.03■□□□□ -0
ARHGEF40-207ENST00000556399 POLR2JP52435 117 aaKnown RBP15.03■□□□□ -0
ARHGEF40-207ENST00000556399 MERTKQ12866 999 aa15.03■□□□□ -0
ARHGEF40-207ENST00000556399 KRT33BQ14525 404 aa15.03■□□□□ -0
ARHGEF40-207ENST00000556399 TLR1Q15399 786 aa15.03■□□□□ -0
ARHGEF40-207ENST00000556399 FAM187BQ17R55 369 aa15.03■□□□□ -0
ARHGEF40-207ENST00000556399 BRMS1LQ5PSV4 323 aa15.03■□□□□ -0
ARHGEF40-207ENST00000556399 AFTPHQ6ULP2 937 aa15.03■□□□□ -0
ARHGEF40-207ENST00000556399 BBS7Q8IWZ6 715 aa15.03■□□□□ -0
ARHGEF40-207ENST00000556399 SNX27Q96L92 541 aa15.03■□□□□ -0
ARHGEF40-207ENST00000556399 PPP3R2Q96LZ3 170 aa15.03■□□□□ -0
ARHGEF40-207ENST00000556399 MUC13Q9H3R2 512 aa15.03■□□□□ -0
ARHGEF40-207ENST00000556399 REEP1Q9H902 201 aa15.03■□□□□ -0
ARHGEF40-207ENST00000556399 SUCOQ9UBS9 1254 aaKnown RBP15.03■□□□□ -0
ARHGEF40-207ENST00000556399 SIPA1L3O60292 1781 aaPredicted RBP15.03■□□□□ -0
ARHGEF40-207ENST00000556399 LOC100506127A0A0U1RQW1 187 aa15.03■□□□□ -0
ARHGEF40-207ENST00000556399 MGAT4DA6NG13 374 aa15.03■□□□□ -0
ARHGEF40-207ENST00000556399 PIP5K1BO14986 540 aa15.03■□□□□ -0
ARHGEF40-207ENST00000556399 SNNO75324 88 aaPredicted RBP15.03■□□□□ -0
ARHGEF40-207ENST00000556399 FBXO48Q5FWF7 155 aa15.03■□□□□ -0
ARHGEF40-207ENST00000556399 B3GNT9Q6UX72 402 aa15.03■□□□□ -0
ARHGEF40-207ENST00000556399 NECAB2Q7Z6G3 386 aa15.03■□□□□ -0
ARHGEF40-207ENST00000556399 OR2T12Q8NG77 320 aa15.03■□□□□ -0
ARHGEF40-207ENST00000556399 GATA6Q92908 595 aa15.03■□□□□ -0
ARHGEF40-207ENST00000556399 MLPHQ9BV36 600 aaPredicted RBP15.03■□□□□ -0
ARHGEF40-207ENST00000556399 WDR12Q9GZL7 423 aaKnown RBP15.03■□□□□ -0
ARHGEF40-207ENST00000556399 TMPRSS4Q9NRS4 437 aa15.03■□□□□ -0
ARHGEF40-207ENST00000556399 MYOCOSA0A1B0GUC4 107 aa15.03■□□□□ -0
ARHGEF40-207ENST00000556399 NR4A1P22736 598 aa15.03■□□□□ -0
ARHGEF40-207ENST00000556399 MTHFRP42898 656 aa15.03■□□□□ -0
ARHGEF40-207ENST00000556399 KHDRBS1Q07666 443 aaKnown RBP eCLIP15.03■□□□□ -0
ARHGEF40-207ENST00000556399 CCNYL2Q5T2Q4 361 aa15.03■□□□□ -0
ARHGEF40-207ENST00000556399 IQSEC1Q6DN90 963 aa15.03■□□□□ -0
ARHGEF40-207ENST00000556399 CNSTQ6PJW8 725 aa15.03■□□□□ -0
ARHGEF40-207ENST00000556399 ZNF621Q6ZSS3 439 aa15.03■□□□□ -0
ARHGEF40-207ENST00000556399 DRAXINQ8NBI3 349 aaPredicted RBP15.03■□□□□ -0
ARHGEF40-207ENST00000556399 PPTC7Q8NI37 304 aa15.03■□□□□ -0
ARHGEF40-207ENST00000556399 SLC35F5Q8WV83 523 aa15.03■□□□□ -0
ARHGEF40-207ENST00000556399 SLC39A3Q9BRY0 314 aa15.03■□□□□ -0
ARHGEF40-207ENST00000556399 NDEL1Q9GZM8 345 aa15.03■□□□□ -0
ARHGEF40-207ENST00000556399 MARCH2Q9P0N8 246 aa15.03■□□□□ -0
ARHGEF40-207ENST00000556399 IPPQ9Y573 584 aa15.03■□□□□ -0
ARHGEF40-207ENST00000556399 KIF13AQ9H1H9 1805 aa15.02■□□□□ -0
ARHGEF40-207ENST00000556399 GNG14A0A1W2PPG7 69 aa15.02■□□□□ -0
ARHGEF40-207ENST00000556399 PDLIM1O00151 329 aa15.02■□□□□ -0
ARHGEF40-207ENST00000556399 C22orf31O95567 290 aa15.02■□□□□ -0
ARHGEF40-207ENST00000556399 CYBBP04839 570 aa15.02■□□□□ -0
ARHGEF40-207ENST00000556399 THRBP10828 461 aa15.02■□□□□ -0
ARHGEF40-207ENST00000556399 CCR10P46092 362 aa15.02■□□□□ -0
ARHGEF40-207ENST00000556399 KPNA1P52294 538 aaPredicted RBP15.02■□□□□ -0
ARHGEF40-207ENST00000556399 RABGGTBP53611 331 aa15.02■□□□□ -0
ARHGEF40-207ENST00000556399 SYPL2Q5VXT5 272 aa15.02■□□□□ -0
ARHGEF40-207ENST00000556399 ZHX1-C8orf76Q96EF9 292 aa15.02■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 66.5 ms