RNA–Protein interactions for RNA: ENST00000556374.5

ATXN3-241, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 1,083 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-241ENST00000556374 PLA2G15Q8NCC3 412 aa4.49□□□□□ -1.69
ATXN3-241ENST00000556374 CHST14Q8NCH0 376 aa4.49□□□□□ -1.69
ATXN3-241ENST00000556374 OR5B17Q8NGF7 314 aa4.49□□□□□ -1.69
ATXN3-241ENST00000556374 OR5AN1Q8NGI8 311 aa4.49□□□□□ -1.69
ATXN3-241ENST00000556374 TCP10LQ8TDR4 215 aa4.49□□□□□ -1.69
ATXN3-241ENST00000556374 DENND1AQ8TEH3 1009 aa4.49□□□□□ -1.69
ATXN3-241ENST00000556374 DCAKDQ8WVC6 231 aa4.49□□□□□ -1.69
ATXN3-241ENST00000556374 NEU4Q8WWR8 484 aaPredicted RBP4.49□□□□□ -1.69
ATXN3-241ENST00000556374 SEPT1Q8WYJ6 367 aa4.49□□□□□ -1.69
ATXN3-241ENST00000556374 CPT1BQ92523 772 aa4.49□□□□□ -1.69
ATXN3-241ENST00000556374 JADE3Q92613 823 aa4.49□□□□□ -1.69
ATXN3-241ENST00000556374 C16orf92Q96LL3 132 aa4.49□□□□□ -1.69
ATXN3-241ENST00000556374 NLRP4Q96MN2 994 aa4.49□□□□□ -1.69
ATXN3-241ENST00000556374 TSNARE1Q96NA8 513 aa4.49□□□□□ -1.69
ATXN3-241ENST00000556374 SRPK1Q96SB4 655 aaKnown RBP4.49□□□□□ -1.69
ATXN3-241ENST00000556374 TSC22D3Q99576 134 aa4.49□□□□□ -1.69
ATXN3-241ENST00000556374 BTBD10Q9BSF8 475 aa4.49□□□□□ -1.69
ATXN3-241ENST00000556374 FAM167BQ9BTA0 163 aa4.49□□□□□ -1.69
ATXN3-241ENST00000556374 INO80BQ9C086 356 aaPredicted RBP4.49□□□□□ -1.69
ATXN3-241ENST00000556374 LHX5Q9H2C1 402 aa4.49□□□□□ -1.69
ATXN3-241ENST00000556374 FAM124BQ9H5Z6 455 aaPredicted RBP4.49□□□□□ -1.69
ATXN3-241ENST00000556374 STN1Q9H668 368 aaKnown RBP4.49□□□□□ -1.69
ATXN3-241ENST00000556374 CYP3A43Q9HB55 503 aa4.49□□□□□ -1.69
ATXN3-241ENST00000556374 SLCO1B3Q9NPD5 702 aa4.49□□□□□ -1.69
ATXN3-241ENST00000556374 PRMT7Q9NVM4 692 aaPredicted RBP4.49□□□□□ -1.69
ATXN3-241ENST00000556374 MKS1Q9NXB0 559 aa4.49□□□□□ -1.69
ATXN3-241ENST00000556374 NDE1Q9NXR1 346 aa4.49□□□□□ -1.69
ATXN3-241ENST00000556374 SLC5A4Q9NY91 659 aa4.49□□□□□ -1.69
ATXN3-241ENST00000556374 HOXC10Q9NYD6 342 aa4.49□□□□□ -1.69
ATXN3-241ENST00000556374 HECAQ9UBI9 543 aaPredicted RBP4.49□□□□□ -1.69
ATXN3-241ENST00000556374 HEY2Q9UBP5 337 aa4.49□□□□□ -1.69
ATXN3-241ENST00000556374 HESX1Q9UBX0 185 aa4.49□□□□□ -1.69
ATXN3-241ENST00000556374 PCSK1NQ9UHG2 260 aa4.49□□□□□ -1.69
ATXN3-241ENST00000556374 MID2Q9UJV3 735 aa4.49□□□□□ -1.69
ATXN3-241ENST00000556374 ZNF180Q9UJW8 692 aa4.49□□□□□ -1.69
ATXN3-241ENST00000556374 CORO1CQ9ULV4 474 aaPredicted RBP4.49□□□□□ -1.69
ATXN3-241ENST00000556374 USP18Q9UMW8 372 aa4.49□□□□□ -1.69
ATXN3-241ENST00000556374 DOCK5Q9H7D0 1870 aa4.49□□□□□ -1.69
ATXN3-241ENST00000556374 CNTNAP2Q9UHC6 1331 aa4.48□□□□□ -1.69
ATXN3-241ENST00000556374 WDR81Q562E7 1941 aa4.48□□□□□ -1.69
ATXN3-241ENST00000556374 KIAA1217Q5T5P2 1943 aa4.48□□□□□ -1.69
ATXN3-241ENST00000556374 COL4A4P53420 1690 aaPredicted RBP4.48□□□□□ -1.69
ATXN3-241ENST00000556374 RALGAPA2Q2PPJ7 1873 aa4.48□□□□□ -1.69
ATXN3-241ENST00000556374 BRWD1Q9NSI6 2320 aa4.48□□□□□ -1.69
ATXN3-241ENST00000556374 MYH9P35579 1960 aaKnown RBP4.48□□□□□ -1.69
ATXN3-241ENST00000556374 CCDC195A0A1B0GUA6 201 aa4.48□□□□□ -1.69
ATXN3-241ENST00000556374 A0A1W2PPM1 405 aa4.48□□□□□ -1.69
ATXN3-241ENST00000556374 FAM221BA6H8Z2 402 aa4.48□□□□□ -1.69
ATXN3-241ENST00000556374 C2orf78A6NCI8 922 aa4.48□□□□□ -1.69
ATXN3-241ENST00000556374 FOXO6A8MYZ6 492 aa4.48□□□□□ -1.69
ATXN3-241ENST00000556374 TRIM49D1C9J1S8 452 aa4.48□□□□□ -1.69
ATXN3-241ENST00000556374 FCHO1O14526 889 aa4.48□□□□□ -1.69
ATXN3-241ENST00000556374 TRDMT1O14717 391 aaKnown RBP4.48□□□□□ -1.69
ATXN3-241ENST00000556374 KLF11O14901 512 aa4.48□□□□□ -1.69
ATXN3-241ENST00000556374 CLGNO14967 610 aa4.48□□□□□ -1.69
ATXN3-241ENST00000556374 PPP1R12AO14974 1030 aaPredicted RBP4.48□□□□□ -1.69
ATXN3-241ENST00000556374 TP73O15350 636 aa4.48□□□□□ -1.69
ATXN3-241ENST00000556374 SMIM24O75264 130 aa4.48□□□□□ -1.69
ATXN3-241ENST00000556374 GLRA3O75311 464 aa4.48□□□□□ -1.69
ATXN3-241ENST00000556374 FKBP6O75344 327 aa4.48□□□□□ -1.69
ATXN3-241ENST00000556374 IPO13O94829 963 aaKnown RBP4.48□□□□□ -1.69
ATXN3-241ENST00000556374 TMEM63AO94886 807 aa4.48□□□□□ -1.69
ATXN3-241ENST00000556374 STBD1O95210 358 aa4.48□□□□□ -1.69
ATXN3-241ENST00000556374 PSMG1O95456 288 aa4.48□□□□□ -1.69
ATXN3-241ENST00000556374 ERBB2P04626 1255 aa4.48□□□□□ -1.69
ATXN3-241ENST00000556374 PDHA1P08559 390 aa4.48□□□□□ -1.69
ATXN3-241ENST00000556374 TPBGLP0DKB5 382 aa4.48□□□□□ -1.69
ATXN3-241ENST00000556374 SETSIPP0DME0 302 aa4.48□□□□□ -1.69
ATXN3-241ENST00000556374 MCF2P10911 925 aa4.48□□□□□ -1.69
ATXN3-241ENST00000556374 BGNP21810 368 aa4.48□□□□□ -1.69
ATXN3-241ENST00000556374 UBA1P22314 1058 aaKnown RBP4.48□□□□□ -1.69
ATXN3-241ENST00000556374 TGM1P22735 817 aa4.48□□□□□ -1.69
ATXN3-241ENST00000556374 PAX7P23759 505 aa4.48□□□□□ -1.69
ATXN3-241ENST00000556374 GCAP28676 217 aa4.48□□□□□ -1.69
ATXN3-241ENST00000556374 SDC4P31431 198 aa4.48□□□□□ -1.69
ATXN3-241ENST00000556374 TCF7P36402 384 aaPredicted RBP4.48□□□□□ -1.69
ATXN3-241ENST00000556374 PTDSS1P48651 473 aaKnown RBP4.48□□□□□ -1.69
ATXN3-241ENST00000556374 SLC26A2P50443 739 aa4.48□□□□□ -1.69
ATXN3-241ENST00000556374 NEK3P51956 506 aa4.48□□□□□ -1.69
ATXN3-241ENST00000556374 GPX6P59796 221 aa4.48□□□□□ -1.69
ATXN3-241ENST00000556374 DGCR2P98153 550 aa4.48□□□□□ -1.69
ATXN3-241ENST00000556374 DSG1Q02413 1049 aa4.48□□□□□ -1.69
ATXN3-241ENST00000556374 TFF2Q03403 129 aa4.48□□□□□ -1.69
ATXN3-241ENST00000556374 SLC34A1Q06495 639 aa4.48□□□□□ -1.69
ATXN3-241ENST00000556374 CDK18Q07002 472 aa4.48□□□□□ -1.69
ATXN3-241ENST00000556374 MGAT5Q09328 741 aa4.48□□□□□ -1.69
ATXN3-241ENST00000556374 LAMTOR4Q0VGL1 99 aa4.48□□□□□ -1.69
ATXN3-241ENST00000556374 OVGP1Q12889 678 aa4.48□□□□□ -1.69
ATXN3-241ENST00000556374 STX3Q13277 289 aa4.48□□□□□ -1.69
ATXN3-241ENST00000556374 KPNB1Q14974 876 aaKnown RBP4.48□□□□□ -1.69
ATXN3-241ENST00000556374 TMEM132DQ14C87 1099 aa4.48□□□□□ -1.69
ATXN3-241ENST00000556374 RBBP5Q15291 538 aaKnown RBP4.48□□□□□ -1.69
ATXN3-241ENST00000556374 GSTA3Q16772 222 aa4.48□□□□□ -1.69
ATXN3-241ENST00000556374 AAK1Q2M2I8 961 aa4.48□□□□□ -1.69
ATXN3-241ENST00000556374 KBTBD12Q3ZCT8 623 aa4.48□□□□□ -1.69
ATXN3-241ENST00000556374 PTPN20Q4JDL3 420 aa4.48□□□□□ -1.69
ATXN3-241ENST00000556374 FSCBQ5H9T9 825 aa4.48□□□□□ -1.69
ATXN3-241ENST00000556374 CFAP157Q5JU67 520 aa4.48□□□□□ -1.69
ATXN3-241ENST00000556374 KCNT1Q5JUK3 1230 aa4.48□□□□□ -1.69
ATXN3-241ENST00000556374 ZBTB41Q5SVQ8 909 aa4.48□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms